RNA–Protein interactions for RNA: ENST00000562553.5

CCNDBP1-203, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-203ENST00000562553 MX1P20591 662 aa18.61■□□□□ 0.57
CCNDBP1-203ENST00000562553 USP5P45974 858 aa18.61■□□□□ 0.57
CCNDBP1-203ENST00000562553 IFNL1Q8IU54 200 aa18.61■□□□□ 0.57
CCNDBP1-203ENST00000562553 CERS3Q8IU89 383 aa18.61■□□□□ 0.57
CCNDBP1-203ENST00000562553 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.61■□□□□ 0.571e-6■■■□□ 18.5
CCNDBP1-203ENST00000562553 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.61■□□□□ 0.57
CCNDBP1-203ENST00000562553 PTPRFP10586 1907 aa18.61■□□□□ 0.57
CCNDBP1-203ENST00000562553 BAZ2AQ9UIF9 1905 aaKnown RBP18.61■□□□□ 0.57
CCNDBP1-203ENST00000562553 IRF6O14896 467 aa18.6■□□□□ 0.57
CCNDBP1-203ENST00000562553 PPIL2Q13356 520 aa18.6■□□□□ 0.57
CCNDBP1-203ENST00000562553 RRP1BQ14684 758 aaKnown RBP18.6■□□□□ 0.57
CCNDBP1-203ENST00000562553 NOM1Q5C9Z4 860 aaKnown RBP18.6■□□□□ 0.57
CCNDBP1-203ENST00000562553 B4GALNT3Q6L9W6 998 aa18.6■□□□□ 0.57
CCNDBP1-203ENST00000562553 BRI3BPQ8WY22 251 aa18.6■□□□□ 0.57
CCNDBP1-203ENST00000562553 PTPN18Q99952 460 aa18.6■□□□□ 0.57
CCNDBP1-203ENST00000562553 LNPKQ9C0E8 428 aa18.6■□□□□ 0.57
CCNDBP1-203ENST00000562553 DHX36Q9H2U1 1008 aaKnown RBP18.6■□□□□ 0.57
CCNDBP1-203ENST00000562553 DNAJC18Q9H819 358 aa18.6■□□□□ 0.57
CCNDBP1-203ENST00000562553 ARMT1Q9H993 441 aa18.6■□□□□ 0.57
CCNDBP1-203ENST00000562553 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.6■□□□□ 0.57
CCNDBP1-203ENST00000562553 ZBTB47Q9UFB7 747 aaPredicted RBP18.6■□□□□ 0.57
CCNDBP1-203ENST00000562553 TESPA1A2RU30 521 aaPredicted RBP18.59■□□□□ 0.57
CCNDBP1-203ENST00000562553 ERC2O15083 957 aa18.59■□□□□ 0.57
CCNDBP1-203ENST00000562553 GLRX3O76003 335 aaKnown RBP18.59■□□□□ 0.57
CCNDBP1-203ENST00000562553 TBC1D8O95759 1140 aa18.59■□□□□ 0.57
CCNDBP1-203ENST00000562553 INHBEP58166 350 aa18.59■□□□□ 0.57
CCNDBP1-203ENST00000562553 PPATQ06203 517 aa18.59■□□□□ 0.57
CCNDBP1-203ENST00000562553 UBE3CQ15386 1083 aa18.59■□□□□ 0.57
CCNDBP1-203ENST00000562553 SCYL3Q8IZE3 742 aa18.59■□□□□ 0.57
CCNDBP1-203ENST00000562553 KBTBD3Q8NAB2 608 aa18.59■□□□□ 0.57
CCNDBP1-203ENST00000562553 CFHR5Q9BXR6 569 aa18.59■□□□□ 0.57
CCNDBP1-203ENST00000562553 R3HDMLQ9H3Y0 253 aa18.59■□□□□ 0.57
CCNDBP1-203ENST00000562553 PI4KBQ9UBF8 816 aa18.59■□□□□ 0.57
CCNDBP1-203ENST00000562553 CCL15-CCL14A0A0B4J2E2 113 aa18.58■□□□□ 0.56
CCNDBP1-203ENST00000562553 MBD4O95243 580 aa18.58■□□□□ 0.56
CCNDBP1-203ENST00000562553 GTF2A2P52657 109 aa18.58■□□□□ 0.56
CCNDBP1-203ENST00000562553 CCL15Q16663 113 aa18.58■□□□□ 0.56
CCNDBP1-203ENST00000562553 CCDC84Q86UT8 332 aaPredicted RBP18.58■□□□□ 0.56
CCNDBP1-203ENST00000562553 SDR42E1Q8WUS8 393 aa18.58■□□□□ 0.56
CCNDBP1-203ENST00000562553 CRNKL1Q9BZJ0 848 aaKnown RBP18.58■□□□□ 0.56
CCNDBP1-203ENST00000562553 PRKAB2O43741 272 aa18.57■□□□□ 0.56
CCNDBP1-203ENST00000562553 CTNND1O60716 968 aaKnown RBP18.57■□□□□ 0.56
CCNDBP1-203ENST00000562553 PTPRAP18433 802 aa18.57■□□□□ 0.56
CCNDBP1-203ENST00000562553 MLLT1Q03111 559 aaPredicted RBP18.57■□□□□ 0.56
CCNDBP1-203ENST00000562553 ZSCAN25Q6NSZ9 544 aa18.57■□□□□ 0.56
CCNDBP1-203ENST00000562553 CTU1Q7Z7A3 348 aaKnown RBP18.57■□□□□ 0.56
CCNDBP1-203ENST00000562553 PUS7LQ9H0K6 701 aaKnown RBP18.57■□□□□ 0.56
CCNDBP1-203ENST00000562553 STAP2Q9UGK3 403 aa18.57■□□□□ 0.56
CCNDBP1-203ENST00000562553 HERC5Q9UII4 1024 aaKnown RBP18.57■□□□□ 0.56
CCNDBP1-203ENST00000562553 HLA-DOAP06340 250 aa18.56■□□□□ 0.56
CCNDBP1-203ENST00000562553 PDE1AP54750 535 aa18.56■□□□□ 0.56
CCNDBP1-203ENST00000562553 EVX2Q03828 476 aa18.56■□□□□ 0.56
CCNDBP1-203ENST00000562553 SNAPC2Q13487 334 aa18.56■□□□□ 0.56
CCNDBP1-203ENST00000562553 METTL16Q86W50 562 aaKnown RBP18.56■□□□□ 0.56
CCNDBP1-203ENST00000562553 PICK1Q9NRD5 415 aa18.56■□□□□ 0.56
CCNDBP1-203ENST00000562553 KCNH4Q9UQ05 1017 aa18.56■□□□□ 0.56
CCNDBP1-203ENST00000562553 ALDH1A1P00352 501 aa18.55■□□□□ 0.56
CCNDBP1-203ENST00000562553 CETPP11597 493 aa18.55■□□□□ 0.56
CCNDBP1-203ENST00000562553 CAP2P40123 477 aa18.55■□□□□ 0.56
CCNDBP1-203ENST00000562553 NUCB1Q02818 461 aa18.55■□□□□ 0.56
CCNDBP1-203ENST00000562553 SHROOM1Q2M3G4 852 aaPredicted RBP18.55■□□□□ 0.56
CCNDBP1-203ENST00000562553 CHD1LQ86WJ1 897 aa18.55■□□□□ 0.56
CCNDBP1-203ENST00000562553 FOXP4Q8IVH2 680 aaPredicted RBP18.55■□□□□ 0.56
CCNDBP1-203ENST00000562553 FAM43AQ8N2R8 423 aa18.55■□□□□ 0.56
CCNDBP1-203ENST00000562553 CRACR2BQ8N4Y2 399 aaPredicted RBP18.55■□□□□ 0.56
CCNDBP1-203ENST00000562553 DCP1AQ9NPI6 582 aaPredicted RBP18.55■□□□□ 0.56
CCNDBP1-203ENST00000562553 ZHX2Q9Y6X8 837 aa18.55■□□□□ 0.56
CCNDBP1-203ENST00000562553 RNF113AO15541 343 aaKnown RBP18.54■□□□□ 0.56
CCNDBP1-203ENST00000562553 PLCD1P51178 756 aa18.54■□□□□ 0.56
CCNDBP1-203ENST00000562553 JAG1P78504 1218 aa18.54■□□□□ 0.56
CCNDBP1-203ENST00000562553 MOGSQ13724 837 aa18.54■□□□□ 0.56
CCNDBP1-203ENST00000562553 PKN2Q16513 984 aaKnown RBP18.54■□□□□ 0.56
CCNDBP1-203ENST00000562553 OSBP2Q969R2 916 aa18.54■□□□□ 0.56
CCNDBP1-203ENST00000562553 MCM9Q9NXL9 1143 aa18.54■□□□□ 0.56
CCNDBP1-203ENST00000562553 MYH8P13535 1937 aa18.53■□□□□ 0.56
CCNDBP1-203ENST00000562553 TNRC18O15417 2968 aaPredicted RBP18.53■□□□□ 0.56
CCNDBP1-203ENST00000562553 BTBD19C9JJ37 291 aa18.53■□□□□ 0.56
CCNDBP1-203ENST00000562553 CYP2D6P10635 497 aa18.53■□□□□ 0.56
CCNDBP1-203ENST00000562553 CRHR2Q13324 411 aa18.53■□□□□ 0.56
CCNDBP1-203ENST00000562553 OTUD7BQ6GQQ9 843 aa18.53■□□□□ 0.56
CCNDBP1-203ENST00000562553 ZNF296Q8WUU4 475 aaPredicted RBP18.53■□□□□ 0.56
CCNDBP1-203ENST00000562553 APPBP2Q92624 585 aa18.53■□□□□ 0.56
CCNDBP1-203ENST00000562553 FSD1Q9BTV5 496 aa18.53■□□□□ 0.56
CCNDBP1-203ENST00000562553 TRIM34Q9BYJ4 488 aa18.53■□□□□ 0.56
CCNDBP1-203ENST00000562553 AFG3L2Q9Y4W6 797 aa18.53■□□□□ 0.56
CCNDBP1-203ENST00000562553 GPR25O00155 361 aa18.52■□□□□ 0.56
CCNDBP1-203ENST00000562553 GDF11O95390 407 aa18.52■□□□□ 0.56
CCNDBP1-203ENST00000562553 POLR3DP05423 398 aaPredicted RBP18.52■□□□□ 0.56
CCNDBP1-203ENST00000562553 TTC6Q86TZ1 520 aa18.52■□□□□ 0.56
CCNDBP1-203ENST00000562553 EHD4Q9H223 541 aa18.52■□□□□ 0.56
CCNDBP1-203ENST00000562553 SERPINB13Q9UIV8 391 aa18.52■□□□□ 0.56
CCNDBP1-203ENST00000562553 M0R2C6 588 aa18.51■□□□□ 0.55
CCNDBP1-203ENST00000562553 CXCL11O14625 94 aa18.51■□□□□ 0.55
CCNDBP1-203ENST00000562553 ZFYP08048 801 aaPredicted RBP18.51■□□□□ 0.55
CCNDBP1-203ENST00000562553 TAF1CQ15572 869 aaPredicted RBP18.51■□□□□ 0.55
CCNDBP1-203ENST00000562553 PLEKHM2Q8IWE5 1019 aa18.51■□□□□ 0.55
CCNDBP1-203ENST00000562553 STRBPQ96SI9 672 aaKnown RBP18.51■□□□□ 0.55
CCNDBP1-203ENST00000562553 SLC4A4Q9Y6R1 1079 aa18.51■□□□□ 0.55
CCNDBP1-203ENST00000562553 LOC285556D6RIA3 1793 aa18.5■□□□□ 0.55
CCNDBP1-203ENST00000562553 A0A0G2JLL6 359 aaPredicted RBP18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms