RNA–Protein interactions for RNA: ENST00000561976.5

VPS9D1-202, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-202ENST00000561976 IRX2Q9BZI1 471 aaPredicted RBP15.96■□□□□ 0.15
VPS9D1-202ENST00000561976 TOMM22Q9NS69 142 aa15.96■□□□□ 0.15
VPS9D1-202ENST00000561976 TMEM51Q9NW97 253 aa15.96■□□□□ 0.15
VPS9D1-202ENST00000561976 AKR1B15C9JRZ8 316 aaPredicted RBP15.95■□□□□ 0.14
VPS9D1-202ENST00000561976 FMNL1O95466 1100 aaPredicted RBP15.95■□□□□ 0.14
VPS9D1-202ENST00000561976 GUCY1A2P33402 732 aa15.95■□□□□ 0.14
VPS9D1-202ENST00000561976 SGMS1Q86VZ5 419 aa15.95■□□□□ 0.14
VPS9D1-202ENST00000561976 ELOA2Q8IYF1 753 aaPredicted RBP15.95■□□□□ 0.14
VPS9D1-202ENST00000561976 TRIM22Q8IYM9 498 aa15.95■□□□□ 0.14
VPS9D1-202ENST00000561976 CPLX3Q8WVH0 158 aa15.95■□□□□ 0.14
VPS9D1-202ENST00000561976 FBXO2Q9UK22 296 aaPredicted RBP15.95■□□□□ 0.14
VPS9D1-202ENST00000561976 MMP1P03956 469 aa15.95■□□□□ 0.14
VPS9D1-202ENST00000561976 PTPREP23469 700 aa15.95■□□□□ 0.14
VPS9D1-202ENST00000561976 TOB1P50616 345 aaPredicted RBP15.95■□□□□ 0.14
VPS9D1-202ENST00000561976 CTDSPL2Q05D32 466 aa15.95■□□□□ 0.14
VPS9D1-202ENST00000561976 MORC3Q14149 939 aa15.95■□□□□ 0.14
VPS9D1-202ENST00000561976 UBE3CQ15386 1083 aa15.95■□□□□ 0.14
VPS9D1-202ENST00000561976 PPFIBP1Q86W92 1011 aa15.95■□□□□ 0.14
VPS9D1-202ENST00000561976 ZCRB1Q8TBF4 217 aaKnown RBP15.95■□□□□ 0.14
VPS9D1-202ENST00000561976 MRPL44Q9H9J2 332 aaKnown RBP15.95■□□□□ 0.14
VPS9D1-202ENST00000561976 ZSWIM5Q9P217 1185 aa15.95■□□□□ 0.14
VPS9D1-202ENST00000561976 GLI3P10071 1580 aa15.95■□□□□ 0.14
VPS9D1-202ENST00000561976 NUP188Q5SRE5 1749 aa15.94■□□□□ 0.14
VPS9D1-202ENST00000561976 SOWAHDA6NJG2 315 aa15.94■□□□□ 0.14
VPS9D1-202ENST00000561976 PCCAP05165 728 aaPredicted RBP15.94■□□□□ 0.14
VPS9D1-202ENST00000561976 PDE6AP16499 860 aa15.94■□□□□ 0.14
VPS9D1-202ENST00000561976 TXLNAP40222 546 aa15.94■□□□□ 0.14
VPS9D1-202ENST00000561976 RILPL1Q5EBL4 403 aa15.94■□□□□ 0.14
VPS9D1-202ENST00000561976 RRP12Q5JTH9 1297 aaKnown RBP15.94■□□□□ 0.14
VPS9D1-202ENST00000561976 UBXN6Q9BZV1 441 aa15.94■□□□□ 0.14
VPS9D1-202ENST00000561976 NAPBQ9H115 298 aa15.94■□□□□ 0.14
VPS9D1-202ENST00000561976 KLHL10Q6JEL2 608 aa15.94■□□□□ 0.14
VPS9D1-202ENST00000561976 SYNE4Q8N205 404 aa15.94■□□□□ 0.14
VPS9D1-202ENST00000561976 WWC3Q9ULE0 1092 aa15.94■□□□□ 0.14
VPS9D1-202ENST00000561976 PCDHB6Q9Y5E3 794 aa15.94■□□□□ 0.14
VPS9D1-202ENST00000561976 ITGA6P23229 1130 aa15.93■□□□□ 0.14
VPS9D1-202ENST00000561976 SARSP49591 514 aaKnown RBP15.93■□□□□ 0.14
VPS9D1-202ENST00000561976 NR1I3Q14994 352 aa15.93■□□□□ 0.14
VPS9D1-202ENST00000561976 NT5DC1Q5TFE4 455 aa15.93■□□□□ 0.14
VPS9D1-202ENST00000561976 JAKMIP3Q5VZ66 844 aa15.93■□□□□ 0.14
VPS9D1-202ENST00000561976 KIF6Q6ZMV9 814 aa15.93■□□□□ 0.14
VPS9D1-202ENST00000561976 DDX60Q8IY21 1712 aaKnown RBP15.93■□□□□ 0.14
VPS9D1-202ENST00000561976 TRIML1Q8N9V2 468 aa15.93■□□□□ 0.14
VPS9D1-202ENST00000561976 FUT8Q9BYC5 575 aa15.93■□□□□ 0.14
VPS9D1-202ENST00000561976 PCDH11XQ9BZA7 1347 aa15.93■□□□□ 0.14
VPS9D1-202ENST00000561976 PCDH11YQ9BZA8 1340 aa15.93■□□□□ 0.14
VPS9D1-202ENST00000561976 STK36Q9NRP7 1315 aa15.93■□□□□ 0.14
VPS9D1-202ENST00000561976 PUF60Q9UHX1 559 aaKnown RBP15.93■□□□□ 0.14
VPS9D1-202ENST00000561976 RIPOR2Q9Y4F9 1068 aa15.93■□□□□ 0.14
VPS9D1-202ENST00000561976 ERVV-2B6SEH9 535 aa15.93■□□□□ 0.14
VPS9D1-202ENST00000561976 CSF1RP07333 972 aa15.93■□□□□ 0.14
VPS9D1-202ENST00000561976 IFNAR1P17181 557 aa15.93■□□□□ 0.14
VPS9D1-202ENST00000561976 LIFRP42702 1097 aa15.93■□□□□ 0.14
VPS9D1-202ENST00000561976 PLCD1P51178 756 aa15.93■□□□□ 0.14
VPS9D1-202ENST00000561976 CHMP4BP1P59074 171 aa15.93■□□□□ 0.14
VPS9D1-202ENST00000561976 NR5A1Q13285 461 aa15.93■□□□□ 0.14
VPS9D1-202ENST00000561976 LONRF2Q1L5Z9 754 aa15.93■□□□□ 0.14
VPS9D1-202ENST00000561976 KANK3Q6NY19 840 aa15.93■□□□□ 0.14
VPS9D1-202ENST00000561976 ZBTB38Q8NAP3 1195 aaPredicted RBP15.93■□□□□ 0.14
VPS9D1-202ENST00000561976 ZKSCAN3Q9BRR0 538 aa15.93■□□□□ 0.14
VPS9D1-202ENST00000561976 TEX33O43247 280 aa15.92■□□□□ 0.14
VPS9D1-202ENST00000561976 KIF5CO60282 957 aa15.92■□□□□ 0.14
VPS9D1-202ENST00000561976 GYS2P54840 703 aa15.92■□□□□ 0.14
VPS9D1-202ENST00000561976 CMTR1Q8N1G2 835 aaKnown RBP15.92■□□□□ 0.14
VPS9D1-202ENST00000561976 STRBPQ96SI9 672 aaKnown RBP15.92■□□□□ 0.14
VPS9D1-202ENST00000561976 TEX13AQ9BXU3 409 aaPredicted RBP15.92■□□□□ 0.14
VPS9D1-202ENST00000561976 GREM2Q9H772 168 aa15.92■□□□□ 0.14
VPS9D1-202ENST00000561976 GPTP24298 496 aa15.92■□□□□ 0.14
VPS9D1-202ENST00000561976 STX17P56962 302 aa15.92■□□□□ 0.14
VPS9D1-202ENST00000561976 RTN1Q16799 776 aa15.92■□□□□ 0.14
VPS9D1-202ENST00000561976 IGSF22Q8N9C0 903 aa15.92■□□□□ 0.14
VPS9D1-202ENST00000561976 MED15Q96RN5 788 aa15.92■□□□□ 0.14
VPS9D1-202ENST00000561976 RIC1Q4ADV7 1423 aa15.92■□□□□ 0.14
VPS9D1-202ENST00000561976 MYH7P12883 1935 aa15.92■□□□□ 0.14
VPS9D1-202ENST00000561976 A0A1B0GTH6 734 aa15.92■□□□□ 0.14
VPS9D1-202ENST00000561976 ANKRD18BA2A2Z9 1011 aa15.92■□□□□ 0.14
VPS9D1-202ENST00000561976 ATF3P18847 181 aa15.92■□□□□ 0.14
VPS9D1-202ENST00000561976 PHKA1P46020 1223 aa15.92■□□□□ 0.14
VPS9D1-202ENST00000561976 USP49Q70CQ1 688 aa15.92■□□□□ 0.14
VPS9D1-202ENST00000561976 IFNL3Q8IZI9 196 aa15.92■□□□□ 0.14
VPS9D1-202ENST00000561976 PANX2Q96RD6 677 aa15.92■□□□□ 0.14
VPS9D1-202ENST00000561976 CSRNP2Q9H175 543 aa15.92■□□□□ 0.14
VPS9D1-202ENST00000561976 FOXP1Q9H334 677 aaPredicted RBP15.92■□□□□ 0.14
VPS9D1-202ENST00000561976 CEP131Q9UPN4 1083 aa15.92■□□□□ 0.14
VPS9D1-202ENST00000561976 MAP3K15Q6ZN16 1313 aa15.91■□□□□ 0.14
VPS9D1-202ENST00000561976 CCDC151A5D8V7 595 aa15.91■□□□□ 0.14
VPS9D1-202ENST00000561976 ERCC5P28715 1186 aaPredicted RBP15.91■□□□□ 0.14
VPS9D1-202ENST00000561976 AFMP43652 599 aa15.91■□□□□ 0.14
VPS9D1-202ENST00000561976 RBL2Q08999 1139 aa15.91■□□□□ 0.14
VPS9D1-202ENST00000561976 MFSD6Q6ZSS7 791 aa15.91■□□□□ 0.14
VPS9D1-202ENST00000561976 TOM1L2Q6ZVM7 507 aa15.91■□□□□ 0.14
VPS9D1-202ENST00000561976 SRGAP1Q7Z6B7 1085 aa15.91■□□□□ 0.14
VPS9D1-202ENST00000561976 AK7Q96M32 723 aa15.91■□□□□ 0.14
VPS9D1-202ENST00000561976 PLA2G12BQ9BX93 195 aa15.91■□□□□ 0.14
VPS9D1-202ENST00000561976 CABP5Q9NP86 173 aa15.91■□□□□ 0.14
VPS9D1-202ENST00000561976 SEC31BQ9NQW1 1179 aa15.91■□□□□ 0.14
VPS9D1-202ENST00000561976 ADGRG1Q9Y653 693 aa15.91■□□□□ 0.14
VPS9D1-202ENST00000561976 PATL2C9JE40 543 aaKnown RBP15.91■□□□□ 0.14
VPS9D1-202ENST00000561976 ACTN4O43707 911 aaKnown RBP15.91■□□□□ 0.14
VPS9D1-202ENST00000561976 SART3Q15020 963 aaKnown RBP15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms