RNA–Protein interactions for RNA: ENST00000561945.1

SPG7-205, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 411 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-205ENST00000561945 CAP2P40123 477 aa17.91■□□□□ 0.46
SPG7-205ENST00000561945 PPP4CP60510 307 aa17.91■□□□□ 0.46
SPG7-205ENST00000561945 GORABQ5T7V8 394 aa17.91■□□□□ 0.46
SPG7-205ENST00000561945 GADL1Q6ZQY3 521 aa17.91■□□□□ 0.46
SPG7-205ENST00000561945 METTL16Q86W50 562 aaKnown RBP17.91■□□□□ 0.46
SPG7-205ENST00000561945 TMEM57Q8N5G2 664 aa17.91■□□□□ 0.46
SPG7-205ENST00000561945 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.91■□□□□ 0.46
SPG7-205ENST00000561945 HERC5Q9UII4 1024 aaKnown RBP17.91■□□□□ 0.46
SPG7-205ENST00000561945 GABRQQ9UN88 632 aa17.91■□□□□ 0.46
SPG7-205ENST00000561945 TRIM75PA6NK02 468 aa17.9■□□□□ 0.46
SPG7-205ENST00000561945 UBXN2AP68543 259 aa17.9■□□□□ 0.46
SPG7-205ENST00000561945 ATP8B2P98198 1209 aa17.9■□□□□ 0.46
SPG7-205ENST00000561945 TNNI3KQ59H18 835 aa17.9■□□□□ 0.46
SPG7-205ENST00000561945 SH3D19Q5HYK7 790 aa17.9■□□□□ 0.46
SPG7-205ENST00000561945 TREML2Q5T2D2 321 aa17.9■□□□□ 0.46
SPG7-205ENST00000561945 ZKSCAN2Q63HK3 967 aa17.9■□□□□ 0.46
SPG7-205ENST00000561945 FRAT1Q92837 279 aaPredicted RBP17.9■□□□□ 0.46
SPG7-205ENST00000561945 DHX36Q9H2U1 1008 aaKnown RBP17.9■□□□□ 0.46
SPG7-205ENST00000561945 RAI14Q9P0K7 980 aa17.9■□□□□ 0.46
SPG7-205ENST00000561945 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.9■□□□□ 0.46
SPG7-205ENST00000561945 FPGT-TNNI3KV9GXZ4 949 aa17.9■□□□□ 0.46
SPG7-205ENST00000561945 RRP1BQ14684 758 aaKnown RBP17.89■□□□□ 0.45
SPG7-205ENST00000561945 FAM110CQ1W6H9 321 aa17.89■□□□□ 0.45
SPG7-205ENST00000561945 ZNF280CQ8ND82 737 aa17.89■□□□□ 0.45
SPG7-205ENST00000561945 CLUAP1Q96AJ1 413 aa17.89■□□□□ 0.45
SPG7-205ENST00000561945 PI4KBQ9UBF8 816 aa17.89■□□□□ 0.45
SPG7-205ENST00000561945 PNMA3Q9UL41 463 aa17.89■□□□□ 0.45
SPG7-205ENST00000561945 NOP58Q9Y2X3 529 aaKnown RBP17.89■□□□□ 0.45
SPG7-205ENST00000561945 DOCK3Q8IZD9 2030 aa17.88■□□□□ 0.45
SPG7-205ENST00000561945 FAM196BA6NMK8 535 aa17.88■□□□□ 0.45
SPG7-205ENST00000561945 ADCY3O60266 1144 aa17.88■□□□□ 0.45
SPG7-205ENST00000561945 FLT3LGP49771 235 aa17.88■□□□□ 0.45
SPG7-205ENST00000561945 FXR1P51114 621 aaKnown RBP eCLIP17.88■□□□□ 0.45
SPG7-205ENST00000561945 CCDC84Q86UT8 332 aaPredicted RBP17.88■□□□□ 0.45
SPG7-205ENST00000561945 TEX11Q8IYF3 940 aa17.88■□□□□ 0.45
SPG7-205ENST00000561945 SH3RF3Q8TEJ3 882 aaPredicted RBP17.88■□□□□ 0.45
SPG7-205ENST00000561945 SMCR8Q8TEV9 937 aaPredicted RBP17.88■□□□□ 0.45
SPG7-205ENST00000561945 LRP2BPQ9P2M1 347 aa17.88■□□□□ 0.45
SPG7-205ENST00000561945 COLQQ9Y215 455 aaPredicted RBP17.88■□□□□ 0.45
SPG7-205ENST00000561945 LAMA3Q16787 3333 aa17.87■□□□□ 0.45
SPG7-205ENST00000561945 PLXNB2O15031 1838 aa17.87■□□□□ 0.45
SPG7-205ENST00000561945 H0YGN5 161 aa17.87■□□□□ 0.45
SPG7-205ENST00000561945 TNPO2O14787 897 aaKnown RBP17.87■□□□□ 0.45
SPG7-205ENST00000561945 CYP2E1P05181 493 aaPredicted RBP17.87■□□□□ 0.45
SPG7-205ENST00000561945 GCLCP48506 637 aaPredicted RBP17.87■□□□□ 0.45
SPG7-205ENST00000561945 SPP2Q13103 211 aa17.87■□□□□ 0.45
SPG7-205ENST00000561945 CCDC158Q5M9N0 1113 aa17.87■□□□□ 0.45
SPG7-205ENST00000561945 DBNDD2Q9BQY9 259 aa17.87■□□□□ 0.45
SPG7-205ENST00000561945 WDR18Q9BV38 432 aa17.87■□□□□ 0.45
SPG7-205ENST00000561945 RNF208Q9H0X6 261 aa17.87■□□□□ 0.45
SPG7-205ENST00000561945 USP17L5A8MUK1 530 aa17.86■□□□□ 0.45
SPG7-205ENST00000561945 ZBTB7BO15156 539 aaPredicted RBP17.86■□□□□ 0.45
SPG7-205ENST00000561945 SGPL1O95470 568 aa17.86■□□□□ 0.45
SPG7-205ENST00000561945 BAG3O95817 575 aa17.86■□□□□ 0.45
SPG7-205ENST00000561945 PLCG2P16885 1265 aa17.86■□□□□ 0.45
SPG7-205ENST00000561945 ADGRA1Q86SQ6 560 aa17.86■□□□□ 0.45
SPG7-205ENST00000561945 U2AF1L4Q8WU68 220 aaKnown RBP17.86■□□□□ 0.45
SPG7-205ENST00000561945 UNC93B1Q9H1C4 597 aa17.86■□□□□ 0.45
SPG7-205ENST00000561945 DNAJC18Q9H819 358 aa17.86■□□□□ 0.45
SPG7-205ENST00000561945 PAK6Q9NQU5 681 aaPredicted RBP17.86■□□□□ 0.45
SPG7-205ENST00000561945 GINM1Q9NU53 330 aa17.86■□□□□ 0.45
SPG7-205ENST00000561945 FLT1P17948 1338 aa17.85■□□□□ 0.45
SPG7-205ENST00000561945 PABPC4Q13310 644 aaKnown RBP eCLIP17.85■□□□□ 0.45
SPG7-205ENST00000561945 TTC39AQ5SRH9 613 aa17.85■□□□□ 0.45
SPG7-205ENST00000561945 NAA16Q6N069 864 aaPredicted RBP17.85■□□□□ 0.45
SPG7-205ENST00000561945 FOXP4Q8IVH2 680 aaPredicted RBP17.85■□□□□ 0.45
SPG7-205ENST00000561945 ANKRD13CQ8N6S4 541 aa17.85■□□□□ 0.45
SPG7-205ENST00000561945 AS3MTQ9HBK9 375 aa17.85■□□□□ 0.45
SPG7-205ENST00000561945 AATFQ9NY61 560 aaKnown RBP eCLIP17.85■□□□□ 0.45
SPG7-205ENST00000561945 MORF4L1Q9UBU8 362 aa17.85■□□□□ 0.45
SPG7-205ENST00000561945 INHAP05111 366 aa17.84■□□□□ 0.45
SPG7-205ENST00000561945 ASNSP08243 561 aa17.84■□□□□ 0.45
SPG7-205ENST00000561945 HOXA7P31268 230 aaPredicted RBP17.84■□□□□ 0.45
SPG7-205ENST00000561945 HMGCS2P54868 508 aa17.84■□□□□ 0.45
SPG7-205ENST00000561945 TMED8Q6PL24 325 aaPredicted RBP17.84■□□□□ 0.45
SPG7-205ENST00000561945 COA7Q96BR5 231 aa17.84■□□□□ 0.45
SPG7-205ENST00000561945 NOL10Q9BSC4 688 aaKnown RBP17.84■□□□□ 0.45
SPG7-205ENST00000561945 HTATIP2Q9BUP3 242 aa17.84■□□□□ 0.45
SPG7-205ENST00000561945 CRISPLD2Q9H0B8 497 aa17.84■□□□□ 0.45
SPG7-205ENST00000561945 PRO3102Q9H379 93 aa17.84■□□□□ 0.45
SPG7-205ENST00000561945 SNRKQ9NRH2 765 aa17.84■□□□□ 0.45
SPG7-205ENST00000561945 DBNLQ9UJU6 430 aaKnown RBP17.84■□□□□ 0.45
SPG7-205ENST00000561945 SURF6O75683 361 aaKnown RBP17.83■□□□□ 0.44
SPG7-205ENST00000561945 ELNP15502 786 aa17.83■□□□□ 0.44
SPG7-205ENST00000561945 BACE1P56817 501 aa17.83■□□□□ 0.44
SPG7-205ENST00000561945 JAG1P78504 1218 aa17.83■□□□□ 0.44
SPG7-205ENST00000561945 ASCC2Q9H1I8 757 aaPredicted RBP17.83■□□□□ 0.44
SPG7-205ENST00000561945 BIN2Q9UBW5 565 aaPredicted RBP17.83■□□□□ 0.44
SPG7-205ENST00000561945 GJD2Q9UKL4 321 aa17.83■□□□□ 0.44
SPG7-205ENST00000561945 DDX60LQ5H9U9 1706 aaKnown RBP17.83■□□□□ 0.44
SPG7-205ENST00000561945 MYH1P12882 1939 aa17.82■□□□□ 0.44
SPG7-205ENST00000561945 C19orf81C9J6K1 198 aa17.82■□□□□ 0.44
SPG7-205ENST00000561945 ZAP70P43403 619 aa17.82■□□□□ 0.44
SPG7-205ENST00000561945 TGFBRAP1Q8WUH2 860 aa17.82■□□□□ 0.44
SPG7-205ENST00000561945 PIH1D3Q9NQM4 214 aaKnown RBP17.82■□□□□ 0.44
SPG7-205ENST00000561945 ALPK3Q96L96 1907 aa17.81■□□□□ 0.44
SPG7-205ENST00000561945 FARP2O94887 1054 aaPredicted RBP17.81■□□□□ 0.44
SPG7-205ENST00000561945 RLBP1P12271 317 aa17.81■□□□□ 0.44
SPG7-205ENST00000561945 CERS3Q8IU89 383 aa17.81■□□□□ 0.44
SPG7-205ENST00000561945 EAF2Q96CJ1 260 aaPredicted RBP17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms