RNA–Protein interactions for RNA: ENST00000561734.5

RPUSD1-202, Transcript of RNA pseudouridylate synthase domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPUSD1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD1-202ENST00000561734 CCDC152Q4G0S7 254 aa23.3■■□□□ 1.32
RPUSD1-202ENST00000561734 OLFM4Q6UX06 510 aa23.3■■□□□ 1.32
RPUSD1-202ENST00000561734 CGNQ9P2M7 1197 aaKnown RBP23.3■■□□□ 1.32
RPUSD1-202ENST00000561734 PLCH1Q4KWH8 1693 aa23.3■■□□□ 1.32
RPUSD1-202ENST00000561734 PSDA5PKW4 1024 aaPredicted RBP23.3■■□□□ 1.32
RPUSD1-202ENST00000561734 BMP6P22004 513 aa23.3■■□□□ 1.32
RPUSD1-202ENST00000561734 IGHMBP2P38935 993 aaKnown RBP23.3■■□□□ 1.32
RPUSD1-202ENST00000561734 KCNJ6P48051 423 aa23.3■■□□□ 1.32
RPUSD1-202ENST00000561734 DHX8Q14562 1220 aaKnown RBP23.3■■□□□ 1.32
RPUSD1-202ENST00000561734 CCDC87Q9NVE4 849 aa23.3■■□□□ 1.32
RPUSD1-202ENST00000561734 LRP2BPQ9P2M1 347 aa23.3■■□□□ 1.32
RPUSD1-202ENST00000561734 ERICH2A1L162 156 aa23.29■■□□□ 1.32
RPUSD1-202ENST00000561734 MDM2Q00987 491 aaPredicted RBP23.29■■□□□ 1.32
RPUSD1-202ENST00000561734 PDE4BQ07343 736 aa23.29■■□□□ 1.32
RPUSD1-202ENST00000561734 CFAP100Q494V2 611 aa23.29■■□□□ 1.32
RPUSD1-202ENST00000561734 CRACR2BQ8N4Y2 399 aaPredicted RBP23.29■■□□□ 1.32
RPUSD1-202ENST00000561734 NOL12Q9UGY1 213 aaKnown RBP eCLIP23.29■■□□□ 1.32
RPUSD1-202ENST00000561734 FBXO2Q9UK22 296 aaPredicted RBP23.29■■□□□ 1.32
RPUSD1-202ENST00000561734 V9GYY5 206 aaPredicted RBP23.29■■□□□ 1.32
RPUSD1-202ENST00000561734 A0A0G2JS52 829 aa23.28■■□□□ 1.32
RPUSD1-202ENST00000561734 CRKLP46109 303 aaKnown RBP23.28■■□□□ 1.32
RPUSD1-202ENST00000561734 NR5A1Q13285 461 aa23.28■■□□□ 1.32
RPUSD1-202ENST00000561734 FOXP1Q9H334 677 aaPredicted RBP23.28■■□□□ 1.32
RPUSD1-202ENST00000561734 FANCLQ9NW38 375 aa23.28■■□□□ 1.32
RPUSD1-202ENST00000561734 CBFA2T2O43439 604 aa23.28■■□□□ 1.32
RPUSD1-202ENST00000561734 NRDCO43847 1150 aa23.28■■□□□ 1.32
RPUSD1-202ENST00000561734 CAMTA2O94983 1202 aa23.28■■□□□ 1.32
RPUSD1-202ENST00000561734 DEXIO95424 95 aa23.28■■□□□ 1.32
RPUSD1-202ENST00000561734 ADGRA1Q86SQ6 560 aa23.28■■□□□ 1.32
RPUSD1-202ENST00000561734 NUP133Q8WUM0 1156 aa23.28■■□□□ 1.32
RPUSD1-202ENST00000561734 IQSEC3Q9UPP2 1182 aaPredicted RBP23.28■■□□□ 1.32
RPUSD1-202ENST00000561734 CHRNDQ07001 517 aa23.27■■□□□ 1.32
RPUSD1-202ENST00000561734 PPARAQ07869 468 aa23.27■■□□□ 1.32
RPUSD1-202ENST00000561734 ZNF654Q8IZM8 581 aa23.27■■□□□ 1.32
RPUSD1-202ENST00000561734 PCDHB6Q9Y5E3 794 aa23.27■■□□□ 1.32
RPUSD1-202ENST00000561734 PHLPP1O60346 1717 aa23.27■■□□□ 1.32
RPUSD1-202ENST00000561734 TMEM232C9JQI7 657 aa23.27■■□□□ 1.32
RPUSD1-202ENST00000561734 ZSCAN20P17040 1043 aaPredicted RBP23.27■■□□□ 1.32
RPUSD1-202ENST00000561734 PTPREP23469 700 aa23.27■■□□□ 1.32
RPUSD1-202ENST00000561734 PTPN21Q16825 1174 aa23.27■■□□□ 1.32
RPUSD1-202ENST00000561734 RILPL1Q5EBL4 403 aa23.27■■□□□ 1.32
RPUSD1-202ENST00000561734 ERO1AQ96HE7 468 aa23.27■■□□□ 1.32
RPUSD1-202ENST00000561734 FEZ1Q99689 392 aa23.27■■□□□ 1.32
RPUSD1-202ENST00000561734 RNF41Q9H4P4 317 aaPredicted RBP23.27■■□□□ 1.32
RPUSD1-202ENST00000561734 NTSR2O95665 410 aa23.26■■□□□ 1.31
RPUSD1-202ENST00000561734 CYP7A1P22680 504 aa23.26■■□□□ 1.31
RPUSD1-202ENST00000561734 PARP10Q53GL7 1025 aa23.26■■□□□ 1.31
RPUSD1-202ENST00000561734 SYT10Q6XYQ8 523 aa23.26■■□□□ 1.31
RPUSD1-202ENST00000561734 FANCBQ8NB91 859 aa23.26■■□□□ 1.31
RPUSD1-202ENST00000561734 OXER1Q8TDS5 423 aa23.26■■□□□ 1.31
RPUSD1-202ENST00000561734 SDR42E1Q8WUS8 393 aa23.26■■□□□ 1.31
RPUSD1-202ENST00000561734 MAN1B1Q9UKM7 699 aa23.26■■□□□ 1.31
RPUSD1-202ENST00000561734 COL4A1P02462 1669 aa23.26■■□□□ 1.31
RPUSD1-202ENST00000561734 CCDC196A0A1B0GTZ2 297 aa23.25■■□□□ 1.31
RPUSD1-202ENST00000561734 POLR2DO15514 142 aaKnown RBP23.25■■□□□ 1.31
RPUSD1-202ENST00000561734 PRR29P0C7W0 189 aa23.25■■□□□ 1.31
RPUSD1-202ENST00000561734 ATP6V1AP38606 617 aa23.25■■□□□ 1.31
RPUSD1-202ENST00000561734 POSTNQ15063 836 aa23.25■■□□□ 1.31
RPUSD1-202ENST00000561734 VSTM4Q8IW00 320 aa23.25■■□□□ 1.31
RPUSD1-202ENST00000561734 ELOA2Q8IYF1 753 aaPredicted RBP23.25■■□□□ 1.31
RPUSD1-202ENST00000561734 TMTC2Q8N394 836 aa23.25■■□□□ 1.31
RPUSD1-202ENST00000561734 MTA3Q9BTC8 594 aa23.25■■□□□ 1.31
RPUSD1-202ENST00000561734 NIP7Q9Y221 180 aaKnown RBP eCLIP23.25■■□□□ 1.31
RPUSD1-202ENST00000561734 RTL9Q8NET4 1388 aa23.25■■□□□ 1.31
RPUSD1-202ENST00000561734 BCL9LQ86UU0 1499 aa23.25■■□□□ 1.31
RPUSD1-202ENST00000561734 MINDY4BA8MYZ0 360 aa23.25■■□□□ 1.31
RPUSD1-202ENST00000561734 SMIM22K7EJ46 135 aa23.25■■□□□ 1.31
RPUSD1-202ENST00000561734 SLU7O95391 586 aaKnown RBP23.25■■□□□ 1.31
RPUSD1-202ENST00000561734 UBAC1Q9BSL1 405 aa23.25■■□□□ 1.31
RPUSD1-202ENST00000561734 HOOK1Q9UJC3 728 aaKnown RBP23.25■■□□□ 1.31
RPUSD1-202ENST00000561734 GOLGA8FQ08AF8 430 aa23.24■■□□□ 1.31
RPUSD1-202ENST00000561734 GOLGA8DPQ0D2H9 430 aa23.24■■□□□ 1.31
RPUSD1-202ENST00000561734 INTS13Q9NVM9 706 aa23.24■■□□□ 1.31
RPUSD1-202ENST00000561734 SERTAD1Q9UHV2 236 aa23.24■■□□□ 1.31
RPUSD1-202ENST00000561734 WNK3Q9BYP7 1800 aa23.24■■□□□ 1.31
RPUSD1-202ENST00000561734 MYO1BO43795 1136 aa23.24■■□□□ 1.31
RPUSD1-202ENST00000561734 RCAN1P53805 252 aa23.24■■□□□ 1.31
RPUSD1-202ENST00000561734 ELF2Q15723 593 aa23.24■■□□□ 1.31
RPUSD1-202ENST00000561734 HSP90AA4PQ58FG1 418 aa23.24■■□□□ 1.31
RPUSD1-202ENST00000561734 ACSBG1Q96GR2 724 aa23.24■■□□□ 1.31
RPUSD1-202ENST00000561734 ATP2B1P20020 1258 aa23.23■■□□□ 1.31
RPUSD1-202ENST00000561734 GRAMD1CQ8IYS0 662 aa23.23■■□□□ 1.31
RPUSD1-202ENST00000561734 TMX1Q9H3N1 280 aa23.23■■□□□ 1.31
RPUSD1-202ENST00000561734 ABCF2Q9UG63 623 aa23.23■■□□□ 1.31
RPUSD1-202ENST00000561734 PRDM4Q9UKN5 801 aa23.23■■□□□ 1.31
RPUSD1-202ENST00000561734 TNKSO95271 1327 aa23.23■■□□□ 1.31
RPUSD1-202ENST00000561734 TOP1P11387 765 aaKnown RBP23.23■■□□□ 1.31
RPUSD1-202ENST00000561734 SEC23AQ15436 765 aa23.23■■□□□ 1.31
RPUSD1-202ENST00000561734 SHISA4Q96DD7 197 aa23.23■■□□□ 1.31
RPUSD1-202ENST00000561734 L2HGDHQ9H9P8 463 aa23.23■■□□□ 1.31
RPUSD1-202ENST00000561734 COL16A1Q07092 1604 aaPredicted RBP23.22■■□□□ 1.31
RPUSD1-202ENST00000561734 FMR1Q06787 632 aaKnown RBP eCLIP23.22■■□□□ 1.31
RPUSD1-202ENST00000561734 ITPK1Q13572 414 aa23.22■■□□□ 1.31
RPUSD1-202ENST00000561734 ZNF827Q17R98 1081 aa23.22■■□□□ 1.31
RPUSD1-202ENST00000561734 NT5DC1Q5TFE4 455 aa23.22■■□□□ 1.31
RPUSD1-202ENST00000561734 ZNF579Q8NAF0 562 aaKnown RBP23.22■■□□□ 1.31
RPUSD1-202ENST00000561734 CABP5Q9NP86 173 aa23.22■■□□□ 1.31
RPUSD1-202ENST00000561734 OGFRQ9NZT2 677 aa23.22■■□□□ 1.31
RPUSD1-202ENST00000561734 SRPRBQ9Y5M8 271 aaKnown RBP23.22■■□□□ 1.31
RPUSD1-202ENST00000561734 LOC102724428A0A0B4J2F2 783 aa23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms