RNA–Protein interactions for RNA: ENST00000561554.5

RPL4-202, Transcript of ribosomal protein L4, humanhuman

TSL 4

Gene RPL4, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL4-202ENST00000561554 COL25A1Q9BXS0 654 aaPredicted RBP13.54□□□□□ -0.24
RPL4-202ENST00000561554 UBE2OQ9C0C9 1292 aaKnown RBP13.54□□□□□ -0.24
RPL4-202ENST00000561554 OSBPL5Q9H0X9 879 aaPredicted RBP13.54□□□□□ -0.24
RPL4-202ENST00000561554 PDS5AQ29RF7 1337 aaKnown RBP13.54□□□□□ -0.24
RPL4-202ENST00000561554 POTEB2H3BUK9 544 aa13.53□□□□□ -0.24
RPL4-202ENST00000561554 CIAO1O76071 339 aa13.53□□□□□ -0.24
RPL4-202ENST00000561554 MAP4K4O95819 1239 aaPredicted RBP13.53□□□□□ -0.24
RPL4-202ENST00000561554 XRCC5P13010 732 aaKnown RBP13.53□□□□□ -0.24
RPL4-202ENST00000561554 TREML2Q5T2D2 321 aa13.53□□□□□ -0.24
RPL4-202ENST00000561554 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.53□□□□□ -0.245e-49■■■■□ 19.3
RPL4-202ENST00000561554 ZSCAN29Q8IWY8 852 aaPredicted RBP13.53□□□□□ -0.24
RPL4-202ENST00000561554 TRMT44Q8IYL2 757 aaKnown RBP13.53□□□□□ -0.24
RPL4-202ENST00000561554 MORF4L1Q9UBU8 362 aa13.53□□□□□ -0.24
RPL4-202ENST00000561554 PTPRCP08575 1304 aa13.53□□□□□ -0.24
RPL4-202ENST00000561554 COL2A1P02458 1487 aaPredicted RBP13.53□□□□□ -0.24
RPL4-202ENST00000561554 DDTLA6NHG4 134 aaPredicted RBP13.52□□□□□ -0.25
RPL4-202ENST00000561554 COL6A1P12109 1028 aa13.52□□□□□ -0.25
RPL4-202ENST00000561554 SH3D19Q5HYK7 790 aa13.52□□□□□ -0.25
RPL4-202ENST00000561554 ATG9AQ7Z3C6 839 aa13.52□□□□□ -0.25
RPL4-202ENST00000561554 ZNF280CQ8ND82 737 aa13.52□□□□□ -0.25
RPL4-202ENST00000561554 SOCS4Q8WXH5 440 aa13.52□□□□□ -0.25
RPL4-202ENST00000561554 USP44Q9H0E7 712 aa13.52□□□□□ -0.25
RPL4-202ENST00000561554 VCANP13611 3396 aa13.51□□□□□ -0.25
RPL4-202ENST00000561554 PLXNB2O15031 1838 aa13.51□□□□□ -0.25
RPL4-202ENST00000561554 PFASO15067 1338 aa13.51□□□□□ -0.25
RPL4-202ENST00000561554 SYN1P17600 705 aa13.51□□□□□ -0.25
RPL4-202ENST00000561554 ATP2B3Q16720 1220 aa13.51□□□□□ -0.25
RPL4-202ENST00000561554 CCDC184Q52MB2 194 aa13.51□□□□□ -0.25
RPL4-202ENST00000561554 TRIB2Q92519 343 aa13.51□□□□□ -0.25
RPL4-202ENST00000561554 CEP126Q9P2H0 1117 aa13.51□□□□□ -0.25
RPL4-202ENST00000561554 DNAH12Q6ZR08 3092 aa13.5□□□□□ -0.25
RPL4-202ENST00000561554 SPP2Q13103 211 aa13.5□□□□□ -0.25
RPL4-202ENST00000561554 SPTY2D1Q68D10 685 aaPredicted RBP13.5□□□□□ -0.25
RPL4-202ENST00000561554 DZIP1Q86YF9 867 aaKnown RBP13.5□□□□□ -0.25
RPL4-202ENST00000561554 NUDT12Q9BQG2 462 aa13.5□□□□□ -0.25
RPL4-202ENST00000561554 ASCC2Q9H1I8 757 aaPredicted RBP13.5□□□□□ -0.25
RPL4-202ENST00000561554 DDX4Q9NQI0 724 aaKnown RBP13.5□□□□□ -0.25
RPL4-202ENST00000561554 GPR75-ASB3A0A0A6YYF3 556 aa13.49□□□□□ -0.25
RPL4-202ENST00000561554 PRKAR2AP13861 404 aaKnown RBP13.49□□□□□ -0.25
RPL4-202ENST00000561554 HOXA7P31268 230 aaPredicted RBP13.49□□□□□ -0.25
RPL4-202ENST00000561554 PHKA1P46020 1223 aa13.49□□□□□ -0.25
RPL4-202ENST00000561554 TRIM32Q13049 653 aa13.49□□□□□ -0.25
RPL4-202ENST00000561554 AS3MTQ9HBK9 375 aa13.49□□□□□ -0.25
RPL4-202ENST00000561554 ATAD5Q96QE3 1844 aa13.48□□□□□ -0.25
RPL4-202ENST00000561554 MROH7-TTC4A0A0A0MT08 1334 aa13.48□□□□□ -0.25
RPL4-202ENST00000561554 USP17L5A8MUK1 530 aa13.48□□□□□ -0.25
RPL4-202ENST00000561554 CAP2P40123 477 aa13.48□□□□□ -0.25
RPL4-202ENST00000561554 IL15P40933 162 aaPredicted RBP13.48□□□□□ -0.25
RPL4-202ENST00000561554 BTDP43251 543 aa13.48□□□□□ -0.25
RPL4-202ENST00000561554 HMGCS2P54868 508 aa13.48□□□□□ -0.25
RPL4-202ENST00000561554 RHBDL3P58872 404 aa13.48□□□□□ -0.25
RPL4-202ENST00000561554 MRPL50Q8N5N7 158 aaKnown RBP13.48□□□□□ -0.25
RPL4-202ENST00000561554 GTF3C2Q8WUA4 911 aaPredicted RBP13.48□□□□□ -0.25
RPL4-202ENST00000561554 GUCD1Q96NT3 240 aa13.48□□□□□ -0.25
RPL4-202ENST00000561554 WDR18Q9BV38 432 aa13.48□□□□□ -0.25
RPL4-202ENST00000561554 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.48□□□□□ -0.25
RPL4-202ENST00000561554 HERC5Q9UII4 1024 aaKnown RBP13.48□□□□□ -0.25
RPL4-202ENST00000561554 MAPK4P31152 587 aa13.47□□□□□ -0.25
RPL4-202ENST00000561554 PICALMQ13492 652 aa13.47□□□□□ -0.25
RPL4-202ENST00000561554 CCDC102BQ68D86 513 aa13.47□□□□□ -0.25
RPL4-202ENST00000561554 CCDC84Q86UT8 332 aaPredicted RBP13.47□□□□□ -0.25
RPL4-202ENST00000561554 GPRC5AQ8NFJ5 357 aa13.47□□□□□ -0.25
RPL4-202ENST00000561554 USP6NLQ92738 828 aa13.47□□□□□ -0.25
RPL4-202ENST00000561554 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.47□□□□□ -0.25
RPL4-202ENST00000561554 SALL2Q9Y467 1007 aaPredicted RBP13.47□□□□□ -0.25
RPL4-202ENST00000561554 EYSQ5T1H1 3165 aa13.46□□□□□ -0.25
RPL4-202ENST00000561554 SLURP2P0DP57 97 aa13.46□□□□□ -0.25
RPL4-202ENST00000561554 ZKSCAN1P17029 563 aaPredicted RBP13.46□□□□□ -0.25
RPL4-202ENST00000561554 CYP2B6P20813 491 aa13.46□□□□□ -0.25
RPL4-202ENST00000561554 BACE1P56817 501 aa13.46□□□□□ -0.25
RPL4-202ENST00000561554 IRX3P78415 501 aaPredicted RBP13.46□□□□□ -0.25
RPL4-202ENST00000561554 RASGRF1Q13972 1273 aa13.46□□□□□ -0.25
RPL4-202ENST00000561554 PDE3AQ14432 1141 aa13.46□□□□□ -0.25
RPL4-202ENST00000561554 LRRC26Q2I0M4 334 aa13.46□□□□□ -0.25
RPL4-202ENST00000561554 LHX8Q68G74 356 aa13.46□□□□□ -0.25
RPL4-202ENST00000561554 GINM1Q9NU53 330 aa13.46□□□□□ -0.25
RPL4-202ENST00000561554 ABCF2Q9UG63 623 aa13.46□□□□□ -0.25
RPL4-202ENST00000561554 HDAC5Q9UQL6 1122 aa13.46□□□□□ -0.25
RPL4-202ENST00000561554 PRUNE2Q8WUY3 3088 aa13.46□□□□□ -0.25
RPL4-202ENST00000561554 SPTBN5Q9NRC6 3674 aaKnown RBP13.46□□□□□ -0.26
RPL4-202ENST00000561554 C19orf81C9J6K1 198 aa13.45□□□□□ -0.26
RPL4-202ENST00000561554 LDHCP07864 332 aa13.45□□□□□ -0.26
RPL4-202ENST00000561554 RGS2P41220 211 aa13.45□□□□□ -0.26
RPL4-202ENST00000561554 HERVK_113P62684 666 aa13.45□□□□□ -0.26
RPL4-202ENST00000561554 GSTO1P78417 241 aa13.45□□□□□ -0.26
RPL4-202ENST00000561554 CACNB2Q08289 660 aaPredicted RBP13.45□□□□□ -0.26
RPL4-202ENST00000561554 MKRN4PQ13434 485 aaPredicted RBP13.45□□□□□ -0.26
RPL4-202ENST00000561554 ZNF697Q5TEC3 545 aa13.45□□□□□ -0.26
RPL4-202ENST00000561554 ERICH6Q7L0X2 663 aa13.45□□□□□ -0.26
RPL4-202ENST00000561554 LBHD1Q9BQE6 289 aaPredicted RBP13.45□□□□□ -0.26
RPL4-202ENST00000561554 COPRSQ9NQ92 184 aa13.45□□□□□ -0.26
RPL4-202ENST00000561554 MSCO60682 206 aa13.44□□□□□ -0.26
RPL4-202ENST00000561554 ASNSP08243 561 aa13.44□□□□□ -0.26
RPL4-202ENST00000561554 MDM2Q00987 491 aaPredicted RBP13.44□□□□□ -0.26
RPL4-202ENST00000561554 MECOMQ03112 1051 aa13.44□□□□□ -0.26
RPL4-202ENST00000561554 MORN1Q5T089 497 aa13.44□□□□□ -0.26
RPL4-202ENST00000561554 BBXQ8WY36 941 aaPredicted RBP13.44□□□□□ -0.26
RPL4-202ENST00000561554 APBA2Q99767 749 aa13.44□□□□□ -0.26
RPL4-202ENST00000561554 SIL1Q9H173 461 aa13.44□□□□□ -0.26
RPL4-202ENST00000561554 MRS2Q9HD23 443 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms