RNA–Protein interactions for RNA: ENST00000561514.1

PALB2-202, Transcript of partner and localizer of BRCA2, humanhuman

TSL 5

Gene PALB2, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-202ENST00000561514 U2AF1L4Q8WU68 220 aaKnown RBP10.37□□□□□ -0.75
PALB2-202ENST00000561514 GPR108Q9NPR9 543 aa10.37□□□□□ -0.75
PALB2-202ENST00000561514 PAK6Q9NQU5 681 aaPredicted RBP10.37□□□□□ -0.75
PALB2-202ENST00000561514 GABRQQ9UN88 632 aa10.37□□□□□ -0.75
PALB2-202ENST00000561514 DOCK2Q92608 1830 aa10.37□□□□□ -0.75
PALB2-202ENST00000561514 SZT2Q5T011 3432 aa10.37□□□□□ -0.75
PALB2-202ENST00000561514 MYH13Q9UKX3 1938 aa10.37□□□□□ -0.75
PALB2-202ENST00000561514 TRIM75PA6NK02 468 aa10.36□□□□□ -0.75
PALB2-202ENST00000561514 ADCY3O60266 1144 aa10.36□□□□□ -0.75
PALB2-202ENST00000561514 MYCP01106 439 aaPredicted RBP10.36□□□□□ -0.75
PALB2-202ENST00000561514 GNAI2P04899 355 aa10.36□□□□□ -0.75
PALB2-202ENST00000561514 LDHCP07864 332 aa10.36□□□□□ -0.75
PALB2-202ENST00000561514 MCAMP43121 646 aa10.36□□□□□ -0.75
PALB2-202ENST00000561514 FLT3LGP49771 235 aa10.36□□□□□ -0.75
PALB2-202ENST00000561514 PICALMQ13492 652 aa10.36□□□□□ -0.75
PALB2-202ENST00000561514 ATF7IPQ6VMQ6 1270 aa10.36□□□□□ -0.75
PALB2-202ENST00000561514 ZSCAN29Q8IWY8 852 aaPredicted RBP10.36□□□□□ -0.75
PALB2-202ENST00000561514 ZNF512BQ96KM6 892 aaPredicted RBP10.36□□□□□ -0.75
PALB2-202ENST00000561514 CRISPLD2Q9H0B8 497 aa10.36□□□□□ -0.75
PALB2-202ENST00000561514 UNC93B1Q9H1C4 597 aa10.36□□□□□ -0.75
PALB2-202ENST00000561514 HERC5Q9UII4 1024 aaKnown RBP10.36□□□□□ -0.75
PALB2-202ENST00000561514 PNMA3Q9UL41 463 aa10.36□□□□□ -0.75
PALB2-202ENST00000561514 LAMA3Q16787 3333 aa10.35□□□□□ -0.75
PALB2-202ENST00000561514 PNMA6EA0A0J9YXQ4 647 aa10.35□□□□□ -0.75
PALB2-202ENST00000561514 IPO8O15397 1037 aaKnown RBP10.35□□□□□ -0.75
PALB2-202ENST00000561514 FARP2O94887 1054 aaPredicted RBP10.35□□□□□ -0.75
PALB2-202ENST00000561514 SGPL1O95470 568 aa10.35□□□□□ -0.75
PALB2-202ENST00000561514 INHAP05111 366 aa10.35□□□□□ -0.75
PALB2-202ENST00000561514 UQCRFS1P1P0C7P4 283 aa10.35□□□□□ -0.75
PALB2-202ENST00000561514 CAP2P40123 477 aa10.35□□□□□ -0.75
PALB2-202ENST00000561514 GCLCP48506 637 aaPredicted RBP10.35□□□□□ -0.75
PALB2-202ENST00000561514 PPP4CP60510 307 aa10.35□□□□□ -0.75
PALB2-202ENST00000561514 RRP1BQ14684 758 aaKnown RBP10.35□□□□□ -0.75
PALB2-202ENST00000561514 TREML2Q5T2D2 321 aa10.35□□□□□ -0.75
PALB2-202ENST00000561514 GADL1Q6ZQY3 521 aa10.35□□□□□ -0.75
PALB2-202ENST00000561514 CCDC84Q86UT8 332 aaPredicted RBP10.35□□□□□ -0.75
PALB2-202ENST00000561514 ZNF280CQ8ND82 737 aa10.35□□□□□ -0.75
PALB2-202ENST00000561514 SMCR8Q8TEV9 937 aaPredicted RBP10.35□□□□□ -0.75
PALB2-202ENST00000561514 HTATIP2Q9BUP3 242 aa10.35□□□□□ -0.75
PALB2-202ENST00000561514 WDR18Q9BV38 432 aa10.35□□□□□ -0.75
PALB2-202ENST00000561514 RNF208Q9H0X6 261 aa10.35□□□□□ -0.75
PALB2-202ENST00000561514 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.35□□□□□ -0.75
PALB2-202ENST00000561514 MORF4L1Q9UBU8 362 aa10.35□□□□□ -0.75
PALB2-202ENST00000561514 DOCK1Q14185 1865 aa10.34□□□□□ -0.75
PALB2-202ENST00000561514 TNPO2O14787 897 aaKnown RBP10.34□□□□□ -0.75
PALB2-202ENST00000561514 TBC1D9Q6ZT07 1266 aa10.34□□□□□ -0.75
PALB2-202ENST00000561514 SSH3Q8TE77 659 aa10.34□□□□□ -0.75
PALB2-202ENST00000561514 DHX36Q9H2U1 1008 aaKnown RBP10.34□□□□□ -0.75
PALB2-202ENST00000561514 DNAJC18Q9H819 358 aa10.34□□□□□ -0.75
PALB2-202ENST00000561514 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.34□□□□□ -0.75
PALB2-202ENST00000561514 GINM1Q9NU53 330 aa10.34□□□□□ -0.75
PALB2-202ENST00000561514 GJD2Q9UKL4 321 aa10.34□□□□□ -0.75
PALB2-202ENST00000561514 TNNQ9UQP3 1299 aa10.34□□□□□ -0.75
PALB2-202ENST00000561514 PHIPQ8WWQ0 1821 aa10.34□□□□□ -0.75
PALB2-202ENST00000561514 LOC285556D6RIA3 1793 aa10.34□□□□□ -0.75
PALB2-202ENST00000561514 PTPRFP10586 1907 aa10.33□□□□□ -0.76
PALB2-202ENST00000561514 A0A1W2PPC1 479 aa10.33□□□□□ -0.76
PALB2-202ENST00000561514 FAM196BA6NMK8 535 aa10.33□□□□□ -0.76
PALB2-202ENST00000561514 USP17L5A8MUK1 530 aa10.33□□□□□ -0.76
PALB2-202ENST00000561514 ZBTB7BO15156 539 aaPredicted RBP10.33□□□□□ -0.76
PALB2-202ENST00000561514 ELNP15502 786 aa10.33□□□□□ -0.76
PALB2-202ENST00000561514 PLCG2P16885 1265 aa10.33□□□□□ -0.76
PALB2-202ENST00000561514 SPP2Q13103 211 aa10.33□□□□□ -0.76
PALB2-202ENST00000561514 PABPC4Q13310 644 aaKnown RBP eCLIP10.33□□□□□ -0.76
PALB2-202ENST00000561514 CHRDL2Q6WN34 429 aa10.33□□□□□ -0.76
PALB2-202ENST00000561514 TEX11Q8IYF3 940 aa10.33□□□□□ -0.76
PALB2-202ENST00000561514 ANKRD13CQ8N6S4 541 aa10.33□□□□□ -0.76
PALB2-202ENST00000561514 COA7Q96BR5 231 aa10.33□□□□□ -0.76
PALB2-202ENST00000561514 NEUROD6Q96NK8 337 aa10.33□□□□□ -0.76
PALB2-202ENST00000561514 ASCC2Q9H1I8 757 aaPredicted RBP10.33□□□□□ -0.76
PALB2-202ENST00000561514 RBM27Q9P2N5 1060 aaKnown RBP10.33□□□□□ -0.76
PALB2-202ENST00000561514 PI4KBQ9UBF8 816 aa10.33□□□□□ -0.76
PALB2-202ENST00000561514 NOP58Q9Y2X3 529 aaKnown RBP10.33□□□□□ -0.76
PALB2-202ENST00000561514 MYH2Q9UKX2 1941 aa10.33□□□□□ -0.76
PALB2-202ENST00000561514 ECM2O94769 699 aaPredicted RBP10.32□□□□□ -0.76
PALB2-202ENST00000561514 HMGCRP04035 888 aa10.32□□□□□ -0.76
PALB2-202ENST00000561514 HOXA7P31268 230 aaPredicted RBP10.32□□□□□ -0.76
PALB2-202ENST00000561514 HMGCS2P54868 508 aa10.32□□□□□ -0.76
PALB2-202ENST00000561514 G3BP1Q13283 466 aaKnown RBP eCLIP10.32□□□□□ -0.76
PALB2-202ENST00000561514 TNNI3KQ59H18 835 aa10.32□□□□□ -0.76
PALB2-202ENST00000561514 ANKLE1Q8NAG6 615 aa10.32□□□□□ -0.76
PALB2-202ENST00000561514 SH3RF3Q8TEJ3 882 aaPredicted RBP10.32□□□□□ -0.76
PALB2-202ENST00000561514 RAI14Q9P0K7 980 aa10.32□□□□□ -0.76
PALB2-202ENST00000561514 BIN2Q9UBW5 565 aaPredicted RBP10.32□□□□□ -0.76
PALB2-202ENST00000561514 NR2E3Q9Y5X4 410 aa10.32□□□□□ -0.76
PALB2-202ENST00000561514 FPGT-TNNI3KV9GXZ4 949 aa10.32□□□□□ -0.76
PALB2-202ENST00000561514 FLT1P17948 1338 aa10.32□□□□□ -0.76
PALB2-202ENST00000561514 CUL9Q8IWT3 2517 aa10.31□□□□□ -0.76
PALB2-202ENST00000561514 BCAR3O75815 825 aa10.31□□□□□ -0.76
PALB2-202ENST00000561514 CYP2E1P05181 493 aaPredicted RBP10.31□□□□□ -0.76
PALB2-202ENST00000561514 ASNSP08243 561 aa10.31□□□□□ -0.76
PALB2-202ENST00000561514 MNX1P50219 401 aaPredicted RBP10.31□□□□□ -0.76
PALB2-202ENST00000561514 BACE1P56817 501 aa10.31□□□□□ -0.76
PALB2-202ENST00000561514 JAG1P78504 1218 aa10.31□□□□□ -0.76
PALB2-202ENST00000561514 ATP8B2P98198 1209 aa10.31□□□□□ -0.76
PALB2-202ENST00000561514 MKRN4PQ13434 485 aaPredicted RBP10.31□□□□□ -0.76
PALB2-202ENST00000561514 GORABQ5T7V8 394 aa10.31□□□□□ -0.76
PALB2-202ENST00000561514 MAP3K21Q5TCX8 1036 aa10.31□□□□□ -0.76
PALB2-202ENST00000561514 NAA16Q6N069 864 aaPredicted RBP10.31□□□□□ -0.76
PALB2-202ENST00000561514 TMED8Q6PL24 325 aaPredicted RBP10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms