RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 TRIM37O94972 964 aa5.86□□□□□ -1.47
HERC1-215ENST00000561436 FAM87AP0C7U9 286 aa5.86□□□□□ -1.47
HERC1-215ENST00000561436 CD97P48960 835 aa5.86□□□□□ -1.47
HERC1-215ENST00000561436 LIG3P49916 1009 aa5.86□□□□□ -1.47
HERC1-215ENST00000561436 MAP7Q14244 749 aa5.86□□□□□ -1.47
HERC1-215ENST00000561436 HS2ST1Q7LGA3 356 aa5.86□□□□□ -1.47
HERC1-215ENST00000561436 SSU72Q9NP77 194 aaKnown RBP5.86□□□□□ -1.47
HERC1-215ENST00000561436 ATG3Q9NT62 314 aa5.86□□□□□ -1.47
HERC1-215ENST00000561436 TFE3P19532 575 aaPredicted RBP5.85□□□□□ -1.47
HERC1-215ENST00000561436 ZC3H6P61129 1189 aaKnown RBP5.85□□□□□ -1.47
HERC1-215ENST00000561436 WIPI1Q5MNZ9 446 aaPredicted RBP5.85□□□□□ -1.47
HERC1-215ENST00000561436 FAM181AQ8N9Y4 354 aa5.85□□□□□ -1.47
HERC1-215ENST00000561436 JARID2Q92833 1246 aaPredicted RBP5.85□□□□□ -1.47
HERC1-215ENST00000561436 ELMO3Q96BJ8 720 aa5.85□□□□□ -1.47
HERC1-215ENST00000561436 CCSER2Q9H7U1 834 aa5.85□□□□□ -1.47
HERC1-215ENST00000561436 FBRSQ9HAH7 460 aa5.85□□□□□ -1.47
HERC1-215ENST00000561436 PIM2Q9P1W9 311 aa5.85□□□□□ -1.47
HERC1-215ENST00000561436 LEMD3Q9Y2U8 911 aa5.85□□□□□ -1.47
HERC1-215ENST00000561436 SAMM50Q9Y512 469 aa5.85□□□□□ -1.47
HERC1-215ENST00000561436 USP31Q70CQ4 1352 aa5.84□□□□□ -1.47
HERC1-215ENST00000561436 RLBP1P12271 317 aa5.84□□□□□ -1.47
HERC1-215ENST00000561436 ERVK-24P63145 666 aa5.84□□□□□ -1.47
HERC1-215ENST00000561436 HDLBPQ00341 1268 aaKnown RBP5.84□□□□□ -1.47
HERC1-215ENST00000561436 FANCCQ00597 558 aa5.84□□□□□ -1.47
HERC1-215ENST00000561436 FAM160A1Q05DH4 1040 aa5.84□□□□□ -1.47
HERC1-215ENST00000561436 PWP1Q13610 501 aa5.84□□□□□ -1.47
HERC1-215ENST00000561436 GNL2Q13823 731 aaKnown RBP5.84□□□□□ -1.47
HERC1-215ENST00000561436 LRRC14Q15048 493 aa5.84□□□□□ -1.47
HERC1-215ENST00000561436 DIEXFQ68CQ4 756 aaKnown RBP5.84□□□□□ -1.47
HERC1-215ENST00000561436 NT5DC4Q86YG4 428 aa5.84□□□□□ -1.47
HERC1-215ENST00000561436 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.84□□□□□ -1.47
HERC1-215ENST00000561436 TOP6BLQ8N6T0 577 aa5.84□□□□□ -1.47
HERC1-215ENST00000561436 ANKRD24Q8TF21 1146 aa5.84□□□□□ -1.47
HERC1-215ENST00000561436 C8orf37Q96NL8 207 aa5.84□□□□□ -1.47
HERC1-215ENST00000561436 COPRSQ9NQ92 184 aa5.84□□□□□ -1.47
HERC1-215ENST00000561436 CYP8B1Q9UNU6 501 aa5.84□□□□□ -1.47
HERC1-215ENST00000561436 PEG3Q9GZU2 1588 aa5.84□□□□□ -1.48
HERC1-215ENST00000561436 BAZ1AQ9NRL2 1556 aaPredicted RBP5.84□□□□□ -1.48
HERC1-215ENST00000561436 LAMC3Q9Y6N6 1575 aa5.84□□□□□ -1.48
HERC1-215ENST00000561436 SYNGAP1Q96PV0 1343 aa5.83□□□□□ -1.48
HERC1-215ENST00000561436 COBLO75128 1261 aa5.83□□□□□ -1.48
HERC1-215ENST00000561436 ZBTB37Q5TC79 503 aa5.83□□□□□ -1.48
HERC1-215ENST00000561436 BNC2Q6ZN30 1099 aaPredicted RBP5.83□□□□□ -1.48
HERC1-215ENST00000561436 AGMOQ6ZNB7 445 aa5.83□□□□□ -1.48
HERC1-215ENST00000561436 RNF214Q8ND24 703 aa5.83□□□□□ -1.48
HERC1-215ENST00000561436 NOC4LQ9BVI4 516 aaKnown RBP5.83□□□□□ -1.48
HERC1-215ENST00000561436 GGT7Q9UJ14 662 aa5.83□□□□□ -1.48
HERC1-215ENST00000561436 NESP48681 1621 aa5.82□□□□□ -1.48
HERC1-215ENST00000561436 MINDY4BA8MYZ0 360 aa5.82□□□□□ -1.48
HERC1-215ENST00000561436 CYP26A1O43174 497 aa5.82□□□□□ -1.48
HERC1-215ENST00000561436 LMNB1P20700 586 aa5.82□□□□□ -1.48
HERC1-215ENST00000561436 RING1Q06587 406 aa5.82□□□□□ -1.48
HERC1-215ENST00000561436 NKG7Q16617 165 aa5.82□□□□□ -1.48
HERC1-215ENST00000561436 ZNF654Q8IZM8 581 aa5.82□□□□□ -1.48
HERC1-215ENST00000561436 PHC3Q8NDX5 983 aa5.82□□□□□ -1.48
HERC1-215ENST00000561436 XAGE3Q8WTP9 111 aa5.82□□□□□ -1.48
HERC1-215ENST00000561436 TGIF2Q9GZN2 237 aa5.82□□□□□ -1.48
HERC1-215ENST00000561436 ZC3H7BQ9UGR2 993 aaKnown RBP5.82□□□□□ -1.48
HERC1-215ENST00000561436 PF4P02776 101 aa5.81□□□□□ -1.48
HERC1-215ENST00000561436 FOSL1P15407 271 aa5.81□□□□□ -1.48
HERC1-215ENST00000561436 SPINK2P20155 84 aa5.81□□□□□ -1.48
HERC1-215ENST00000561436 HNRNPUQ00839 825 aaKnown RBP eCLIP5.81□□□□□ -1.48
HERC1-215ENST00000561436 C9orf131Q5VYM1 1079 aa5.81□□□□□ -1.48
HERC1-215ENST00000561436 NBPF11Q86T75 865 aa5.81□□□□□ -1.48
HERC1-215ENST00000561436 USP48Q86UV5 1035 aa5.81□□□□□ -1.48
HERC1-215ENST00000561436 RELL1Q8IUW5 271 aa5.81□□□□□ -1.48
HERC1-215ENST00000561436 PSMG3-AS1Q96PY0 264 aa5.81□□□□□ -1.48
HERC1-215ENST00000561436 DPH2Q9BQC3 489 aaPredicted RBP5.81□□□□□ -1.48
HERC1-215ENST00000561436 DUSP23Q9BVJ7 150 aa5.81□□□□□ -1.48
HERC1-215ENST00000561436 PCOLCE2Q9UKZ9 415 aa5.81□□□□□ -1.48
HERC1-215ENST00000561436 MRC2Q9UBG0 1479 aa5.8□□□□□ -1.48
HERC1-215ENST00000561436 KIAA1324LA8MWY0 1029 aaPredicted RBP5.8□□□□□ -1.48
HERC1-215ENST00000561436 GRK4P32298 578 aa5.8□□□□□ -1.48
HERC1-215ENST00000561436 GBP2P32456 591 aaPredicted RBP5.8□□□□□ -1.48
HERC1-215ENST00000561436 GRIK1P39086 918 aa5.8□□□□□ -1.48
HERC1-215ENST00000561436 CD96P40200 585 aa5.8□□□□□ -1.48
HERC1-215ENST00000561436 ETF1P62495 437 aaKnown RBP5.8□□□□□ -1.48
HERC1-215ENST00000561436 SF3A1Q15459 793 aaKnown RBP5.8□□□□□ -1.48
HERC1-215ENST00000561436 MSMPQ1L6U9 139 aa5.8□□□□□ -1.48
HERC1-215ENST00000561436 LDLRAD1Q5T700 205 aa5.8□□□□□ -1.48
HERC1-215ENST00000561436 DUSP27Q5VZP5 1158 aa5.8□□□□□ -1.48
HERC1-215ENST00000561436 OGFOD3Q6PK18 319 aa5.8□□□□□ -1.48
HERC1-215ENST00000561436 CYFIP1Q7L576 1253 aa5.8□□□□□ -1.48
HERC1-215ENST00000561436 SLC51AQ86UW1 340 aa5.8□□□□□ -1.48
HERC1-215ENST00000561436 METTL16Q86W50 562 aaKnown RBP5.8□□□□□ -1.48
HERC1-215ENST00000561436 PLD6Q8N2A8 252 aaKnown RBP5.8□□□□□ -1.48
HERC1-215ENST00000561436 FBXO27Q8NI29 283 aa5.8□□□□□ -1.48
HERC1-215ENST00000561436 MIR1-1HGQ9H1L0 117 aa5.8□□□□□ -1.48
HERC1-215ENST00000561436 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.8□□□□□ -1.48
HERC1-215ENST00000561436 CORINQ9Y5Q5 1042 aa5.8□□□□□ -1.48
HERC1-215ENST00000561436 CNTNAP4Q9C0A0 1308 aa5.79□□□□□ -1.48
HERC1-215ENST00000561436 F13A1P00488 732 aa5.79□□□□□ -1.48
HERC1-215ENST00000561436 ITIH2P19823 946 aa5.79□□□□□ -1.48
HERC1-215ENST00000561436 CAMK2GQ13555 558 aaPredicted RBP5.79□□□□□ -1.48
HERC1-215ENST00000561436 NAALADL2Q58DX5 795 aa5.79□□□□□ -1.48
HERC1-215ENST00000561436 ZNF574Q6ZN55 896 aaPredicted RBP5.79□□□□□ -1.48
HERC1-215ENST00000561436 NFXL1Q6ZNB6 911 aa5.79□□□□□ -1.48
HERC1-215ENST00000561436 ARMCX6Q7L4S7 300 aa5.79□□□□□ -1.48
HERC1-215ENST00000561436 HDXQ7Z353 690 aa5.79□□□□□ -1.48
HERC1-215ENST00000561436 GIMAP7Q8NHV1 300 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms