RNA–Protein interactions for RNA: ENST00000561276.5

LRRC28-221, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 967 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-221ENST00000561276 MINDY4BA8MYZ0 360 aa12.28□□□□□ -0.44
LRRC28-221ENST00000561276 CELF2O95319 508 aaKnown RBP12.28□□□□□ -0.44
LRRC28-221ENST00000561276 FGAP02671 866 aa12.28□□□□□ -0.44
LRRC28-221ENST00000561276 HLA-DOAP06340 250 aa12.28□□□□□ -0.44
LRRC28-221ENST00000561276 SLURP2P0DP57 97 aa12.28□□□□□ -0.44
LRRC28-221ENST00000561276 TDO2P48775 406 aa12.28□□□□□ -0.44
LRRC28-221ENST00000561276 PRKG1Q13976 671 aa12.28□□□□□ -0.44
LRRC28-221ENST00000561276 ALX1Q15699 326 aa12.28□□□□□ -0.44
LRRC28-221ENST00000561276 SBK1Q52WX2 424 aa12.28□□□□□ -0.44
LRRC28-221ENST00000561276 C12orf60Q5U649 245 aa12.28□□□□□ -0.44
LRRC28-221ENST00000561276 KIAA1211Q6ZU35 1233 aa12.28□□□□□ -0.44
LRRC28-221ENST00000561276 AMOTL1Q8IY63 956 aa12.28□□□□□ -0.44
LRRC28-221ENST00000561276 SP7Q8TDD2 431 aaPredicted RBP12.28□□□□□ -0.44
LRRC28-221ENST00000561276 NAPBQ9H115 298 aa12.28□□□□□ -0.44
LRRC28-221ENST00000561276 EPB41L4AQ9HCS5 686 aaPredicted RBP12.28□□□□□ -0.44
LRRC28-221ENST00000561276 CYP2D7A0A087X1C5 515 aa12.27□□□□□ -0.45
LRRC28-221ENST00000561276 PPP1R12BO60237 982 aaPredicted RBP12.27□□□□□ -0.45
LRRC28-221ENST00000561276 USP2O75604 605 aaPredicted RBP12.27□□□□□ -0.45
LRRC28-221ENST00000561276 CYP2D6P10635 497 aa12.27□□□□□ -0.45
LRRC28-221ENST00000561276 MAP3K10Q02779 954 aa12.27□□□□□ -0.45
LRRC28-221ENST00000561276 PTH1RQ03431 593 aa12.27□□□□□ -0.45
LRRC28-221ENST00000561276 EVX2Q03828 476 aa12.27□□□□□ -0.45
LRRC28-221ENST00000561276 TTLL12Q14166 644 aaPredicted RBP12.27□□□□□ -0.45
LRRC28-221ENST00000561276 CRACR2BQ8N4Y2 399 aaPredicted RBP12.27□□□□□ -0.45
LRRC28-221ENST00000561276 C2orf69Q8N8R5 385 aa12.27□□□□□ -0.45
LRRC28-221ENST00000561276 DSCC1Q9BVC3 393 aa12.27□□□□□ -0.45
LRRC28-221ENST00000561276 LAMB1P07942 1786 aa12.27□□□□□ -0.45
LRRC28-221ENST00000561276 SSC5DA1L4H1 1573 aa12.26□□□□□ -0.45
LRRC28-221ENST00000561276 FAM196BA6NMK8 535 aa12.26□□□□□ -0.45
LRRC28-221ENST00000561276 SMIM22K7EJ46 135 aa12.26□□□□□ -0.45
LRRC28-221ENST00000561276 TBC1D12O60347 775 aa12.26□□□□□ -0.45
LRRC28-221ENST00000561276 DCAF15Q66K64 600 aa12.26□□□□□ -0.45
LRRC28-221ENST00000561276 MOB2Q70IA6 237 aa12.26□□□□□ -0.45
LRRC28-221ENST00000561276 METTL16Q86W50 562 aaKnown RBP12.26□□□□□ -0.45
LRRC28-221ENST00000561276 MAP4K1Q92918 833 aa12.26□□□□□ -0.45
LRRC28-221ENST00000561276 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.26□□□□□ -0.45
LRRC28-221ENST00000561276 GBA2Q9HCG7 927 aaPredicted RBP12.26□□□□□ -0.45
LRRC28-221ENST00000561276 ARPP21Q9UBL0 812 aaPredicted RBP12.26□□□□□ -0.45
LRRC28-221ENST00000561276 HERC5Q9UII4 1024 aaKnown RBP12.26□□□□□ -0.45
LRRC28-221ENST00000561276 SERPINB13Q9UIV8 391 aa12.26□□□□□ -0.45
LRRC28-221ENST00000561276 ANGEL1Q9UNK9 670 aaKnown RBP12.26□□□□□ -0.45
LRRC28-221ENST00000561276 ATAD5Q96QE3 1844 aa12.25□□□□□ -0.45
LRRC28-221ENST00000561276 TMEM88BA6NKF7 163 aa12.25□□□□□ -0.45
LRRC28-221ENST00000561276 UBE2Q2LH0YL09 131 aa12.25□□□□□ -0.45
LRRC28-221ENST00000561276 APLP1P51693 650 aa12.25□□□□□ -0.45
LRRC28-221ENST00000561276 C1QTNF8P60827 252 aa12.25□□□□□ -0.45
LRRC28-221ENST00000561276 ARMC9Q7Z3E5 817 aa12.25□□□□□ -0.45
LRRC28-221ENST00000561276 STK11IPQ8N1F8 1099 aa12.25□□□□□ -0.45
LRRC28-221ENST00000561276 KLRG1Q96E93 195 aa12.25□□□□□ -0.45
LRRC28-221ENST00000561276 DYNLL2Q96FJ2 89 aa12.25□□□□□ -0.45
LRRC28-221ENST00000561276 TRIM34Q9BYJ4 488 aa12.25□□□□□ -0.45
LRRC28-221ENST00000561276 ZNF341Q9BYN7 854 aa12.25□□□□□ -0.45
LRRC28-221ENST00000561276 LSG1Q9H089 658 aaKnown RBP12.25□□□□□ -0.45
LRRC28-221ENST00000561276 EHD4Q9H223 541 aa12.25□□□□□ -0.45
LRRC28-221ENST00000561276 ANO2Q9NQ90 1003 aa12.25□□□□□ -0.45
LRRC28-221ENST00000561276 CTNNA3Q9UI47 895 aa12.25□□□□□ -0.45
LRRC28-221ENST00000561276 PHF20L1A8MW92 1017 aa12.24□□□□□ -0.45
LRRC28-221ENST00000561276 ZNF213O14771 459 aa12.24□□□□□ -0.45
LRRC28-221ENST00000561276 IREB2P48200 963 aaKnown RBP12.24□□□□□ -0.45
LRRC28-221ENST00000561276 FKBP1BP68106 108 aa12.24□□□□□ -0.45
LRRC28-221ENST00000561276 CTDSPL2Q05D32 466 aa12.24□□□□□ -0.45
LRRC28-221ENST00000561276 GABPAQ06546 454 aa12.24□□□□□ -0.45
LRRC28-221ENST00000561276 PPARAQ07869 468 aa12.24□□□□□ -0.45
LRRC28-221ENST00000561276 MAP3K11Q16584 847 aa12.24□□□□□ -0.45
LRRC28-221ENST00000561276 PAPPA2Q9BXP8 1791 aa12.24□□□□□ -0.45
LRRC28-221ENST00000561276 ZNF112Q9UJU3 913 aa12.24□□□□□ -0.45
LRRC28-221ENST00000561276 OTOFQ9HC10 1997 aa12.23□□□□□ -0.45
LRRC28-221ENST00000561276 LAMA4Q16363 1823 aa12.23□□□□□ -0.45
LRRC28-221ENST00000561276 ZMYM6O95789 1325 aa12.23□□□□□ -0.45
LRRC28-221ENST00000561276 CDK8P49336 464 aa12.23□□□□□ -0.45
LRRC28-221ENST00000561276 HAND2P61296 217 aa12.23□□□□□ -0.45
LRRC28-221ENST00000561276 MAP3K9P80192 1104 aa12.23□□□□□ -0.45
LRRC28-221ENST00000561276 IMMTQ16891 758 aaKnown RBP12.23□□□□□ -0.45
LRRC28-221ENST00000561276 LDLRAD1Q5T700 205 aa12.23□□□□□ -0.45
LRRC28-221ENST00000561276 TATDN1Q6P1N9 297 aa12.23□□□□□ -0.45
LRRC28-221ENST00000561276 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.23□□□□□ -0.45
LRRC28-221ENST00000561276 C16orf86Q6ZW13 317 aa12.23□□□□□ -0.45
LRRC28-221ENST00000561276 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.23□□□□□ -0.45
LRRC28-221ENST00000561276 ZKSCAN4Q969J2 545 aaPredicted RBP12.23□□□□□ -0.45
LRRC28-221ENST00000561276 WRNIP1Q96S55 665 aa12.23□□□□□ -0.45
LRRC28-221ENST00000561276 DNAJC18Q9H819 358 aa12.23□□□□□ -0.45
LRRC28-221ENST00000561276 INCENPQ9NQS7 918 aa12.23□□□□□ -0.45
LRRC28-221ENST00000561276 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.23□□□□□ -0.45
LRRC28-221ENST00000561276 ANAPC4Q9UJX5 808 aa12.23□□□□□ -0.45
LRRC28-221ENST00000561276 RBM8AQ9Y5S9 174 aaKnown RBP12.23□□□□□ -0.45
LRRC28-221ENST00000561276 CTNND1O60716 968 aaKnown RBP12.22□□□□□ -0.45
LRRC28-221ENST00000561276 REC8O95072 547 aa12.22□□□□□ -0.45
LRRC28-221ENST00000561276 SLC3A2P08195 630 aaKnown RBP12.22□□□□□ -0.45
LRRC28-221ENST00000561276 INPP5BP32019 993 aa12.22□□□□□ -0.45
LRRC28-221ENST00000561276 SHMT1P34896 483 aa12.22□□□□□ -0.45
LRRC28-221ENST00000561276 HUNKP57058 714 aa12.22□□□□□ -0.45
LRRC28-221ENST00000561276 RRP1BQ14684 758 aaKnown RBP12.22□□□□□ -0.45
LRRC28-221ENST00000561276 NECTIN1Q15223 517 aa12.22□□□□□ -0.45
LRRC28-221ENST00000561276 C8orf34Q49A92 452 aa12.22□□□□□ -0.45
LRRC28-221ENST00000561276 CERKLQ49MI3 558 aaPredicted RBP12.22□□□□□ -0.45
LRRC28-221ENST00000561276 SAPCD2Q86UD0 394 aa12.22□□□□□ -0.45
LRRC28-221ENST00000561276 ANKRD13AQ8IZ07 590 aa12.22□□□□□ -0.45
LRRC28-221ENST00000561276 SLC44A5Q8NCS7 719 aa12.22□□□□□ -0.45
LRRC28-221ENST00000561276 MKNK2Q9HBH9 465 aa12.22□□□□□ -0.45
LRRC28-221ENST00000561276 CREBZFQ9NS37 354 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms