RNA–Protein interactions for RNA: ENST00000560927.1

CRTC3-210, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 2

Gene CRTC3, Length 2,463 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-210ENST00000560927 ZNF654Q8IZM8 581 aa16.86■□□□□ 0.29
CRTC3-210ENST00000560927 CRACR2BQ8N4Y2 399 aaPredicted RBP16.86■□□□□ 0.29
CRTC3-210ENST00000560927 MAP7D2Q96T17 732 aa16.86■□□□□ 0.29
CRTC3-210ENST00000560927 BCL2L12Q9HB09 334 aa16.86■□□□□ 0.29
CRTC3-210ENST00000560927 IFNKQ9P0W0 207 aa16.86■□□□□ 0.29
CRTC3-210ENST00000560927 TUBE1Q9UJT0 475 aa16.86■□□□□ 0.29
CRTC3-210ENST00000560927 CYP2D7A0A087X1C5 515 aa16.85■□□□□ 0.29
CRTC3-210ENST00000560927 CUTAO60888 179 aa16.85■□□□□ 0.29
CRTC3-210ENST00000560927 SMC2O95347 1197 aa16.85■□□□□ 0.29
CRTC3-210ENST00000560927 DYNLL1P63167 89 aaKnown RBP16.85■□□□□ 0.29
CRTC3-210ENST00000560927 GRIN1Q05586 938 aa16.85■□□□□ 0.29
CRTC3-210ENST00000560927 LONRF3Q496Y0 759 aa16.85■□□□□ 0.29
CRTC3-210ENST00000560927 FANCBQ8NB91 859 aa16.85■□□□□ 0.29
CRTC3-210ENST00000560927 WASF1Q92558 559 aa16.85■□□□□ 0.29
CRTC3-210ENST00000560927 RIOK1Q9BRS2 568 aaKnown RBP16.85■□□□□ 0.29
CRTC3-210ENST00000560927 NR5A1Q13285 461 aa16.85■□□□□ 0.29
CRTC3-210ENST00000560927 METTL16Q86W50 562 aaKnown RBP16.85■□□□□ 0.29
CRTC3-210ENST00000560927 TRIM22Q8IYM9 498 aa16.85■□□□□ 0.29
CRTC3-210ENST00000560927 ZNF384Q8TF68 577 aa16.85■□□□□ 0.29
CRTC3-210ENST00000560927 UBE2Q2Q8WVN8 375 aa16.85■□□□□ 0.29
CRTC3-210ENST00000560927 HSD3B7Q9H2F3 369 aa16.85■□□□□ 0.29
CRTC3-210ENST00000560927 RNF41Q9H4P4 317 aaPredicted RBP16.85■□□□□ 0.29
CRTC3-210ENST00000560927 MINPP1Q9UNW1 487 aa16.85■□□□□ 0.29
CRTC3-210ENST00000560927 NEMFO60524 1076 aa16.84■□□□□ 0.29
CRTC3-210ENST00000560927 LMOD1P29536 600 aaPredicted RBP16.84■□□□□ 0.29
CRTC3-210ENST00000560927 CLEC4GQ6UXB4 293 aa16.84■□□□□ 0.29
CRTC3-210ENST00000560927 FOXP4Q8IVH2 680 aaPredicted RBP16.84■□□□□ 0.29
CRTC3-210ENST00000560927 OXER1Q8TDS5 423 aa16.84■□□□□ 0.29
CRTC3-210ENST00000560927 CELF1Q92879 486 aaKnown RBP16.84■□□□□ 0.29
CRTC3-210ENST00000560927 UBAC1Q9BSL1 405 aa16.84■□□□□ 0.29
CRTC3-210ENST00000560927 BSDC1Q9NW68 430 aaPredicted RBP16.84■□□□□ 0.29
CRTC3-210ENST00000560927 KCNH3Q9ULD8 1083 aa16.84■□□□□ 0.29
CRTC3-210ENST00000560927 TNKSO95271 1327 aa16.84■□□□□ 0.29
CRTC3-210ENST00000560927 KLRK1P26718 216 aa16.84■□□□□ 0.29
CRTC3-210ENST00000560927 SF3B3Q15393 1217 aaKnown RBP16.84■□□□□ 0.29
CRTC3-210ENST00000560927 SEC23AQ15436 765 aa16.84■□□□□ 0.29
CRTC3-210ENST00000560927 SMARCC1Q92922 1105 aaPredicted RBP16.84■□□□□ 0.29
CRTC3-210ENST00000560927 FOXN1O15353 648 aa16.83■□□□□ 0.28
CRTC3-210ENST00000560927 DEXIO95424 95 aa16.83■□□□□ 0.28
CRTC3-210ENST00000560927 ATP1A3P13637 1013 aa16.83■□□□□ 0.28
CRTC3-210ENST00000560927 UBE4AQ14139 1066 aa16.83■□□□□ 0.28
CRTC3-210ENST00000560927 SAFBQ15424 915 aaKnown RBP eCLIP16.83■□□□□ 0.28
CRTC3-210ENST00000560927 BARGINQ6ZT62 677 aa16.83■□□□□ 0.28
CRTC3-210ENST00000560927 TMTC2Q8N394 836 aa16.83■□□□□ 0.28
CRTC3-210ENST00000560927 KRI1Q8N9T8 703 aaKnown RBP16.83■□□□□ 0.28
CRTC3-210ENST00000560927 SHISA4Q96DD7 197 aa16.83■□□□□ 0.28
CRTC3-210ENST00000560927 FAM84BQ96KN1 310 aaPredicted RBP16.83■□□□□ 0.28
CRTC3-210ENST00000560927 OSBPL5Q9H0X9 879 aaPredicted RBP16.83■□□□□ 0.28
CRTC3-210ENST00000560927 GNL3LQ9NVN8 582 aaKnown RBP16.83■□□□□ 0.28
CRTC3-210ENST00000560927 COL5A3P25940 1745 aaPredicted RBP16.83■□□□□ 0.28
CRTC3-210ENST00000560927 CACNA1SQ13698 1873 aa16.83■□□□□ 0.28
CRTC3-210ENST00000560927 KRBA2Q6ZNG9 492 aa16.82■□□□□ 0.28
CRTC3-210ENST00000560927 ANAPC4Q9UJX5 808 aa16.82■□□□□ 0.28
CRTC3-210ENST00000560927 PCDHB6Q9Y5E3 794 aa16.82■□□□□ 0.28
CRTC3-210ENST00000560927 PRDM1O75626 825 aa16.82■□□□□ 0.28
CRTC3-210ENST00000560927 EVX2Q03828 476 aa16.82■□□□□ 0.28
CRTC3-210ENST00000560927 TBC1D9BQ66K14 1250 aa16.82■□□□□ 0.28
CRTC3-210ENST00000560927 PTF1AQ7RTS3 328 aa16.82■□□□□ 0.28
CRTC3-210ENST00000560927 TMC6Q7Z403 805 aa16.82■□□□□ 0.28
CRTC3-210ENST00000560927 CNNM3Q8NE01 707 aa16.82■□□□□ 0.28
CRTC3-210ENST00000560927 ESR2Q92731 530 aa16.82■□□□□ 0.28
CRTC3-210ENST00000560927 MTA3Q9BTC8 594 aa16.82■□□□□ 0.28
CRTC3-210ENST00000560927 FOXP1Q9H334 677 aaPredicted RBP16.82■□□□□ 0.28
CRTC3-210ENST00000560927 CCDC196A0A1B0GTZ2 297 aa16.81■□□□□ 0.28
CRTC3-210ENST00000560927 A0A1B0GUL6 1792 aa16.81■□□□□ 0.28
CRTC3-210ENST00000560927 SMTNL1A8MU46 457 aa16.81■□□□□ 0.28
CRTC3-210ENST00000560927 CAVIN4Q5BKX8 364 aa16.81■□□□□ 0.28
CRTC3-210ENST00000560927 MTERF4Q7Z6M4 381 aaKnown RBP16.81■□□□□ 0.28
CRTC3-210ENST00000560927 ENAHQ8N8S7 591 aaPredicted RBP16.81■□□□□ 0.28
CRTC3-210ENST00000560927 TRMT1Q9NXH9 659 aaKnown RBP16.81■□□□□ 0.28
CRTC3-210ENST00000560927 FBXO2Q9UK22 296 aaPredicted RBP16.81■□□□□ 0.28
CRTC3-210ENST00000560927 hCG_1642624A0A1W2PR95 340 aa16.81■□□□□ 0.28
CRTC3-210ENST00000560927 IKBKBO14920 756 aa16.81■□□□□ 0.28
CRTC3-210ENST00000560927 CTIFO43310 598 aaKnown RBP16.81■□□□□ 0.28
CRTC3-210ENST00000560927 ARMCX5Q6P1M9 558 aa16.81■□□□□ 0.28
CRTC3-210ENST00000560927 PCDHA5Q9Y5H7 936 aa16.81■□□□□ 0.28
CRTC3-210ENST00000560927 ATP2B1P20020 1258 aa16.8■□□□□ 0.28
CRTC3-210ENST00000560927 BMP6P22004 513 aa16.8■□□□□ 0.28
CRTC3-210ENST00000560927 GTF2E1P29083 439 aaPredicted RBP16.8■□□□□ 0.28
CRTC3-210ENST00000560927 GSDMDP57764 484 aa16.8■□□□□ 0.28
CRTC3-210ENST00000560927 FANCCQ00597 558 aa16.8■□□□□ 0.28
CRTC3-210ENST00000560927 FAM98CQ17RN3 349 aaKnown RBP16.8■□□□□ 0.28
CRTC3-210ENST00000560927 IMPACTQ9P2X3 320 aa16.8■□□□□ 0.28
CRTC3-210ENST00000560927 PTPREP23469 700 aa16.8■□□□□ 0.28
CRTC3-210ENST00000560927 RCAN1P53805 252 aa16.8■□□□□ 0.28
CRTC3-210ENST00000560927 TPM4P67936 248 aa16.8■□□□□ 0.28
CRTC3-210ENST00000560927 RILPL1Q5EBL4 403 aa16.8■□□□□ 0.28
CRTC3-210ENST00000560927 CCDC24Q8N4L8 307 aa16.8■□□□□ 0.28
CRTC3-210ENST00000560927 ZNF592Q92610 1267 aa16.8■□□□□ 0.28
CRTC3-210ENST00000560927 ZSCAN10Q96SZ4 725 aaPredicted RBP16.8■□□□□ 0.28
CRTC3-210ENST00000560927 BAZ2AQ9UIF9 1905 aaKnown RBP16.79■□□□□ 0.28
CRTC3-210ENST00000560927 FAM205CA6NFA0 338 aa16.79■□□□□ 0.28
CRTC3-210ENST00000560927 MDM2Q00987 491 aaPredicted RBP16.79■□□□□ 0.28
CRTC3-210ENST00000560927 CEP135Q66GS9 1140 aa16.79■□□□□ 0.28
CRTC3-210ENST00000560927 NYAP1Q6ZVC0 841 aa16.79■□□□□ 0.28
CRTC3-210ENST00000560927 DPF2Q92785 391 aa16.79■□□□□ 0.28
CRTC3-210ENST00000560927 CABP5Q9NP86 173 aa16.79■□□□□ 0.28
CRTC3-210ENST00000560927 DUOX1Q9NRD9 1551 aa16.79■□□□□ 0.28
CRTC3-210ENST00000560927 PDE4BQ07343 736 aa16.79■□□□□ 0.28
CRTC3-210ENST00000560927 PKN1Q16512 942 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms