RNA–Protein interactions for RNA: ENST00000560658.5

TRPM1-211, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

TSL 2

Gene TRPM1, Length 1,649 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-211ENST00000560658 FAM177BA6PVY3 158 aa20.31■□□□□ 0.84
TRPM1-211ENST00000560658 IGHMBP2P38935 993 aaKnown RBP20.31■□□□□ 0.84
TRPM1-211ENST00000560658 TDO2P48775 406 aa20.31■□□□□ 0.84
TRPM1-211ENST00000560658 RASGRF1Q13972 1273 aa20.31■□□□□ 0.84
TRPM1-211ENST00000560658 SYNE4Q8N205 404 aa20.31■□□□□ 0.84
TRPM1-211ENST00000560658 A0A087WWV3 80 aa20.31■□□□□ 0.84
TRPM1-211ENST00000560658 EXOC5O00471 708 aa20.31■□□□□ 0.84
TRPM1-211ENST00000560658 TOP1P11387 765 aaKnown RBP20.31■□□□□ 0.84
TRPM1-211ENST00000560658 LMOD1P29536 600 aaPredicted RBP20.31■□□□□ 0.84
TRPM1-211ENST00000560658 NT5C2P49902 561 aa20.31■□□□□ 0.84
TRPM1-211ENST00000560658 EIF5P55010 431 aaKnown RBP20.31■□□□□ 0.84
TRPM1-211ENST00000560658 GABPB1Q06547 395 aaPredicted RBP20.31■□□□□ 0.84
TRPM1-211ENST00000560658 METTL16Q86W50 562 aaKnown RBP20.31■□□□□ 0.84
TRPM1-211ENST00000560658 DIS3L2Q8IYB7 885 aaKnown RBP20.31■□□□□ 0.84
TRPM1-211ENST00000560658 ENOX1Q8TC92 643 aaKnown RBP20.31■□□□□ 0.84
TRPM1-211ENST00000560658 FBXW7Q969H0 707 aa20.31■□□□□ 0.84
TRPM1-211ENST00000560658 AIFM3Q96NN9 605 aa20.31■□□□□ 0.84
TRPM1-211ENST00000560658 RNF26Q9BY78 433 aaPredicted RBP20.31■□□□□ 0.84
TRPM1-211ENST00000560658 TRMT1Q9NXH9 659 aaKnown RBP20.31■□□□□ 0.84
TRPM1-211ENST00000560658 SRPRBQ9Y5M8 271 aaKnown RBP20.31■□□□□ 0.84
TRPM1-211ENST00000560658 COL22A1Q8NFW1 1626 aaPredicted RBP20.3■□□□□ 0.84
TRPM1-211ENST00000560658 CICQ96RK0 1608 aaPredicted RBP20.3■□□□□ 0.84
TRPM1-211ENST00000560658 ECM29Q5VYK3 1845 aa20.3■□□□□ 0.84
TRPM1-211ENST00000560658 ARHGAP6O43182 974 aa20.3■□□□□ 0.84
TRPM1-211ENST00000560658 TPM1P09493 284 aa20.3■□□□□ 0.84
TRPM1-211ENST00000560658 MDM2Q00987 491 aaPredicted RBP20.3■□□□□ 0.84
TRPM1-211ENST00000560658 CRACR2BQ8N4Y2 399 aaPredicted RBP20.3■□□□□ 0.84
TRPM1-211ENST00000560658 SLC4A9Q96Q91 983 aa20.3■□□□□ 0.84
TRPM1-211ENST00000560658 HSD3B7Q9H2F3 369 aa20.3■□□□□ 0.84
TRPM1-211ENST00000560658 ZNF215Q9UL58 517 aaPredicted RBP20.3■□□□□ 0.84
TRPM1-211ENST00000560658 ZSCAN20P17040 1043 aaPredicted RBP20.29■□□□□ 0.84
TRPM1-211ENST00000560658 ERCC5P28715 1186 aaPredicted RBP20.29■□□□□ 0.84
TRPM1-211ENST00000560658 ETF1P62495 437 aaKnown RBP20.29■□□□□ 0.84
TRPM1-211ENST00000560658 CBX1P83916 185 aa20.29■□□□□ 0.84
TRPM1-211ENST00000560658 PNOCQ13519 176 aa20.29■□□□□ 0.84
TRPM1-211ENST00000560658 POSTNQ15063 836 aa20.29■□□□□ 0.84
TRPM1-211ENST00000560658 CFAP100Q494V2 611 aa20.29■□□□□ 0.84
TRPM1-211ENST00000560658 LONRF3Q496Y0 759 aa20.29■□□□□ 0.84
TRPM1-211ENST00000560658 ESR2Q92731 530 aa20.29■□□□□ 0.84
TRPM1-211ENST00000560658 ARMT1Q9H993 441 aa20.29■□□□□ 0.84
TRPM1-211ENST00000560658 GNL3LQ9NVN8 582 aaKnown RBP20.29■□□□□ 0.84
TRPM1-211ENST00000560658 BTG4Q9NY30 223 aa20.29■□□□□ 0.84
TRPM1-211ENST00000560658 FBXO2Q9UK22 296 aaPredicted RBP20.29■□□□□ 0.84
TRPM1-211ENST00000560658 PCDHA5Q9Y5H7 936 aa20.29■□□□□ 0.84
TRPM1-211ENST00000560658 SLC4A4Q9Y6R1 1079 aa20.29■□□□□ 0.84
TRPM1-211ENST00000560658 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.28■□□□□ 0.84
TRPM1-211ENST00000560658 CALM1P0DP23 149 aa20.28■□□□□ 0.84
TRPM1-211ENST00000560658 CALM2P0DP24 149 aa20.28■□□□□ 0.84
TRPM1-211ENST00000560658 CALM3P0DP25 149 aa20.28■□□□□ 0.84
TRPM1-211ENST00000560658 SARSP49591 514 aaKnown RBP20.28■□□□□ 0.84
TRPM1-211ENST00000560658 CCDC93Q567U6 631 aa20.28■□□□□ 0.84
TRPM1-211ENST00000560658 CREBRFQ8IUR6 639 aa20.28■□□□□ 0.84
TRPM1-211ENST00000560658 SMARCE1Q969G3 411 aa20.28■□□□□ 0.84
TRPM1-211ENST00000560658 PKNOX2Q96KN3 472 aa20.28■□□□□ 0.84
TRPM1-211ENST00000560658 PYM1Q9BRP8 204 aaKnown RBP20.28■□□□□ 0.84
TRPM1-211ENST00000560658 UBAC1Q9BSL1 405 aa20.28■□□□□ 0.84
TRPM1-211ENST00000560658 RBM28Q9NW13 759 aaKnown RBP20.28■□□□□ 0.84
TRPM1-211ENST00000560658 LAMB2P55268 1798 aa20.28■□□□□ 0.84
TRPM1-211ENST00000560658 BCORQ6W2J9 1755 aa20.28■□□□□ 0.84
TRPM1-211ENST00000560658 CHD4Q14839 1912 aa20.28■□□□□ 0.84
TRPM1-211ENST00000560658 RREB1Q92766 1687 aa20.28■□□□□ 0.84
TRPM1-211ENST00000560658 RGL2O15211 777 aa20.27■□□□□ 0.84
TRPM1-211ENST00000560658 AKAP17AQ02040 695 aaKnown RBP20.27■□□□□ 0.84
TRPM1-211ENST00000560658 STK11IPQ8N1F8 1099 aa20.27■□□□□ 0.84
TRPM1-211ENST00000560658 FANCBQ8NB91 859 aa20.27■□□□□ 0.84
TRPM1-211ENST00000560658 CCDC87Q9NVE4 849 aa20.27■□□□□ 0.84
TRPM1-211ENST00000560658 KIF20AO95235 890 aa20.27■□□□□ 0.83
TRPM1-211ENST00000560658 RXRAP19793 462 aa20.27■□□□□ 0.83
TRPM1-211ENST00000560658 CTDSPL2Q05D32 466 aa20.27■□□□□ 0.83
TRPM1-211ENST00000560658 NUTM2AQ8IVF1 878 aaPredicted RBP20.27■□□□□ 0.83
TRPM1-211ENST00000560658 SENP2Q9HC62 589 aa20.27■□□□□ 0.83
TRPM1-211ENST00000560658 DENND2AQ9ULE3 1009 aa20.27■□□□□ 0.83
TRPM1-211ENST00000560658 IGSF3O75054 1194 aa20.26■□□□□ 0.83
TRPM1-211ENST00000560658 MORC3Q14149 939 aa20.26■□□□□ 0.83
TRPM1-211ENST00000560658 ZNF654Q8IZM8 581 aa20.26■□□□□ 0.83
TRPM1-211ENST00000560658 CLIC6Q96NY7 704 aa20.26■□□□□ 0.83
TRPM1-211ENST00000560658 BRMS1Q9HCU9 246 aa20.26■□□□□ 0.83
TRPM1-211ENST00000560658 AATFQ9NY61 560 aaKnown RBP eCLIP20.26■□□□□ 0.83
TRPM1-211ENST00000560658 MAN1B1Q9UKM7 699 aa20.26■□□□□ 0.83
TRPM1-211ENST00000560658 BTBD18B2RXH4 712 aa20.25■□□□□ 0.83
TRPM1-211ENST00000560658 STX10O60499 249 aa20.25■□□□□ 0.83
TRPM1-211ENST00000560658 TOB1P50616 345 aaPredicted RBP20.25■□□□□ 0.83
TRPM1-211ENST00000560658 PPARAQ07869 468 aa20.25■□□□□ 0.83
TRPM1-211ENST00000560658 TBX2Q13207 712 aaPredicted RBP20.25■□□□□ 0.83
TRPM1-211ENST00000560658 SUSD4Q5VX71 490 aa20.25■□□□□ 0.83
TRPM1-211ENST00000560658 HOMER1Q86YM7 354 aa20.25■□□□□ 0.83
TRPM1-211ENST00000560658 SPATA20Q8TB22 786 aa20.25■□□□□ 0.83
TRPM1-211ENST00000560658 FERMT2Q96AC1 680 aa20.25■□□□□ 0.83
TRPM1-211ENST00000560658 ARID3AQ99856 593 aa20.25■□□□□ 0.83
TRPM1-211ENST00000560658 LRP2BPQ9P2M1 347 aa20.25■□□□□ 0.83
TRPM1-211ENST00000560658 PRDM4Q9UKN5 801 aa20.25■□□□□ 0.83
TRPM1-211ENST00000560658 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.25■□□□□ 0.83
TRPM1-211ENST00000560658 SEMA3EO15041 775 aa20.24■□□□□ 0.83
TRPM1-211ENST00000560658 ATP1A3P13637 1013 aa20.24■□□□□ 0.83
TRPM1-211ENST00000560658 ZNF18P17022 549 aa20.24■□□□□ 0.83
TRPM1-211ENST00000560658 KRT222Q8N1A0 295 aa20.24■□□□□ 0.83
TRPM1-211ENST00000560658 LCORLQ8N3X6 602 aa20.24■□□□□ 0.83
TRPM1-211ENST00000560658 FANCLQ9NW38 375 aa20.24■□□□□ 0.83
TRPM1-211ENST00000560658 ZNF652Q9Y2D9 606 aa20.24■□□□□ 0.83
TRPM1-211ENST00000560658 ZNF804BA4D1E1 1349 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms