RNA–Protein interactions for RNA: ENST00000560641.5

PBX1-219, Transcript of PBX homeobox 1, humanhuman

TSL 5 BASIC

Gene PBX1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-219ENST00000560641 UBE3BQ7Z3V4 1068 aa18.24■□□□□ 0.51
PBX1-219ENST00000560641 TMTC1Q8IUR5 882 aa18.24■□□□□ 0.51
PBX1-219ENST00000560641 MYO6Q9UM54 1294 aa18.24■□□□□ 0.51
PBX1-219ENST00000560641 MST1RQ04912 1400 aa18.23■□□□□ 0.51
PBX1-219ENST00000560641 MAST3O60307 1309 aa18.23■□□□□ 0.51
PBX1-219ENST00000560641 PSMD14O00487 310 aa18.23■□□□□ 0.51
PBX1-219ENST00000560641 ANXA1P04083 346 aa18.23■□□□□ 0.51
PBX1-219ENST00000560641 ATP6V1AP38606 617 aa18.23■□□□□ 0.51
PBX1-219ENST00000560641 MLECQ14165 292 aa18.23■□□□□ 0.51
PBX1-219ENST00000560641 POSTNQ15063 836 aa18.23■□□□□ 0.51
PBX1-219ENST00000560641 WWC2Q6AWC2 1192 aa18.23■□□□□ 0.51
PBX1-219ENST00000560641 ISM2Q6H9L7 571 aa18.23■□□□□ 0.51
PBX1-219ENST00000560641 IGSF22Q8N9C0 903 aa18.23■□□□□ 0.51
PBX1-219ENST00000560641 LZTFL1Q9NQ48 299 aa18.23■□□□□ 0.51
PBX1-219ENST00000560641 ADD3Q9UEY8 706 aaKnown RBP18.23■□□□□ 0.51
PBX1-219ENST00000560641 COL22A1Q8NFW1 1626 aaPredicted RBP18.23■□□□□ 0.51
PBX1-219ENST00000560641 TFCP2Q12800 502 aa18.23■□□□□ 0.51
PBX1-219ENST00000560641 OTUD7BQ6GQQ9 843 aa18.23■□□□□ 0.51
PBX1-219ENST00000560641 KANK3Q6NY19 840 aa18.23■□□□□ 0.51
PBX1-219ENST00000560641 IQSEC3Q9UPP2 1182 aaPredicted RBP18.23■□□□□ 0.51
PBX1-219ENST00000560641 PPFIA1Q13136 1202 aa18.23■□□□□ 0.51
PBX1-219ENST00000560641 ANKRD20A12PQ8NF67 263 aa18.23■□□□□ 0.51
PBX1-219ENST00000560641 WWC3Q9ULE0 1092 aa18.23■□□□□ 0.51
PBX1-219ENST00000560641 ZMYM6O95789 1325 aa18.22■□□□□ 0.51
PBX1-219ENST00000560641 ZEB2O60315 1214 aa18.22■□□□□ 0.51
PBX1-219ENST00000560641 MAP2K2P36507 400 aa18.22■□□□□ 0.51
PBX1-219ENST00000560641 SART3Q15020 963 aaKnown RBP18.22■□□□□ 0.51
PBX1-219ENST00000560641 VPS37DQ86XT2 251 aa18.22■□□□□ 0.51
PBX1-219ENST00000560641 NOA1Q8NC60 698 aaKnown RBP18.22■□□□□ 0.51
PBX1-219ENST00000560641 ZSWIM4Q9H7M6 989 aa18.22■□□□□ 0.51
PBX1-219ENST00000560641 NID2Q14112 1375 aa18.22■□□□□ 0.51
PBX1-219ENST00000560641 CLSTN1O94985 981 aa18.22■□□□□ 0.51
PBX1-219ENST00000560641 RHOXF2BP0C7M4 288 aa18.22■□□□□ 0.51
PBX1-219ENST00000560641 RBL2Q08999 1139 aa18.22■□□□□ 0.51
PBX1-219ENST00000560641 NBPF14Q5TI25 921 aa18.22■□□□□ 0.51
PBX1-219ENST00000560641 SH3GL2Q99962 352 aa18.22■□□□□ 0.51
PBX1-219ENST00000560641 RHOXF2Q9BQY4 288 aa18.22■□□□□ 0.51
PBX1-219ENST00000560641 PAG1Q9NWQ8 432 aa18.22■□□□□ 0.51
PBX1-219ENST00000560641 FAM169AQ9Y6X4 670 aa18.22■□□□□ 0.51
PBX1-219ENST00000560641 GRIN2DO15399 1336 aa18.22■□□□□ 0.51
PBX1-219ENST00000560641 EPB41P11171 864 aaKnown RBP18.21■□□□□ 0.51
PBX1-219ENST00000560641 MARCKSP29966 332 aaPredicted RBP18.21■□□□□ 0.51
PBX1-219ENST00000560641 IRAK1P51617 712 aa18.21■□□□□ 0.51
PBX1-219ENST00000560641 EPHA10Q5JZY3 1008 aa18.21■□□□□ 0.51
PBX1-219ENST00000560641 DBNDD2Q9BQY9 259 aa18.21■□□□□ 0.51
PBX1-219ENST00000560641 TOMM22Q9NS69 142 aa18.21■□□□□ 0.51
PBX1-219ENST00000560641 MYH8P13535 1937 aa18.21■□□□□ 0.51
PBX1-219ENST00000560641 AGPSO00116 658 aa18.21■□□□□ 0.51
PBX1-219ENST00000560641 EBAG9O00559 213 aa18.21■□□□□ 0.51
PBX1-219ENST00000560641 FSBPO95073 299 aa18.21■□□□□ 0.51
PBX1-219ENST00000560641 CHGBP05060 677 aa18.21■□□□□ 0.51
PBX1-219ENST00000560641 TRIM14Q14142 442 aa18.21■□□□□ 0.51
PBX1-219ENST00000560641 YTHDF3Q7Z739 585 aaKnown RBP18.21■□□□□ 0.51
PBX1-219ENST00000560641 PPFIBP1Q86W92 1011 aa18.21■□□□□ 0.51
PBX1-219ENST00000560641 AMOTL1Q8IY63 956 aa18.21■□□□□ 0.51
PBX1-219ENST00000560641 SKOR1P84550 965 aa18.21■□□□□ 0.51
PBX1-219ENST00000560641 SPATA1Q5VX52 437 aa18.21■□□□□ 0.51
PBX1-219ENST00000560641 PAPD7Q5XG87 772 aaKnown RBP18.21■□□□□ 0.51
PBX1-219ENST00000560641 KRI1Q8N9T8 703 aaKnown RBP18.21■□□□□ 0.51
PBX1-219ENST00000560641 STK36Q9NRP7 1315 aa18.2■□□□□ 0.5
PBX1-219ENST00000560641 EIF3HO15372 352 aaKnown RBP eCLIP18.2■□□□□ 0.5
PBX1-219ENST00000560641 CDKL5O76039 1030 aa18.2■□□□□ 0.5
PBX1-219ENST00000560641 STIM1Q13586 685 aa18.2■□□□□ 0.5
PBX1-219ENST00000560641 TTC39AQ5SRH9 613 aa18.2■□□□□ 0.5
PBX1-219ENST00000560641 RNF113AO15541 343 aaKnown RBP18.2■□□□□ 0.5
PBX1-219ENST00000560641 RNMTO43148 476 aaKnown RBP18.2■□□□□ 0.5
PBX1-219ENST00000560641 AMOTQ4VCS5 1084 aa18.2■□□□□ 0.5
PBX1-219ENST00000560641 DDX46Q7L014 1031 aaKnown RBP18.2■□□□□ 0.5
PBX1-219ENST00000560641 FAM76AQ8TAV0 307 aa18.2■□□□□ 0.5
PBX1-219ENST00000560641 SMARCC1Q92922 1105 aaPredicted RBP18.2■□□□□ 0.5
PBX1-219ENST00000560641 CLIC6Q96NY7 704 aa18.2■□□□□ 0.5
PBX1-219ENST00000560641 METTL22Q9BUU2 404 aaPredicted RBP18.2■□□□□ 0.5
PBX1-219ENST00000560641 SCN11AQ9UI33 1791 aa18.2■□□□□ 0.5
PBX1-219ENST00000560641 LRRC10BA6NIK2 292 aa18.19■□□□□ 0.5
PBX1-219ENST00000560641 FNTAP49354 379 aa18.19■□□□□ 0.5
PBX1-219ENST00000560641 EMC10Q5UCC4 262 aa18.19■□□□□ 0.5
PBX1-219ENST00000560641 IP6K1Q92551 441 aa18.19■□□□□ 0.5
PBX1-219ENST00000560641 LRP6O75581 1613 aa18.19■□□□□ 0.5
PBX1-219ENST00000560641 KIF1AQ12756 1690 aa18.19■□□□□ 0.5
PBX1-219ENST00000560641 PXDNQ92626 1479 aa18.19■□□□□ 0.5
PBX1-219ENST00000560641 KLF18A0A0U1RQI7 1052 aa18.19■□□□□ 0.5
PBX1-219ENST00000560641 GOLGA8BA8MQT2 603 aa18.19■□□□□ 0.5
PBX1-219ENST00000560641 SH2B2O14492 632 aaPredicted RBP18.19■□□□□ 0.5
PBX1-219ENST00000560641 FOXP2O15409 715 aa18.19■□□□□ 0.5
PBX1-219ENST00000560641 ZNF572Q7Z3I7 529 aaPredicted RBP18.19■□□□□ 0.5
PBX1-219ENST00000560641 KLHDC4Q8TBB5 520 aa18.19■□□□□ 0.5
PBX1-219ENST00000560641 A0A0U1RQJ8 604 aa18.19■□□□□ 0.5
PBX1-219ENST00000560641 ANTXR2P58335 489 aa18.19■□□□□ 0.5
PBX1-219ENST00000560641 CUL4BQ13620 913 aa18.19■□□□□ 0.5
PBX1-219ENST00000560641 PTPN21Q16825 1174 aa18.19■□□□□ 0.5
PBX1-219ENST00000560641 ATRIPQ8WXE1 791 aa18.19■□□□□ 0.5
PBX1-219ENST00000560641 GGA2Q9UJY4 613 aa18.19■□□□□ 0.5
PBX1-219ENST00000560641 ABCC12Q96J65 1359 aa18.18■□□□□ 0.5
PBX1-219ENST00000560641 GYPCP04921 128 aa18.18■□□□□ 0.5
PBX1-219ENST00000560641 ITIH3Q06033 890 aa18.18■□□□□ 0.5
PBX1-219ENST00000560641 SAMSN1Q9NSI8 373 aaKnown RBP18.18■□□□□ 0.5
PBX1-219ENST00000560641 A0A0G2JLW4 131 aa18.18■□□□□ 0.5
PBX1-219ENST00000560641 GOLGA8KD6RF30 607 aa18.18■□□□□ 0.5
PBX1-219ENST00000560641 PRC1O43663 620 aa18.18■□□□□ 0.5
PBX1-219ENST00000560641 PTPREP23469 700 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms