RNA–Protein interactions for RNA: ENST00000560588.5

RMDN3-209, Transcript of regulator of microtubule dynamics 3, humanhuman

TSL 2

Gene RMDN3, Length 2,202 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RMDN3-209ENST00000560588 TUBE1Q9UJT0 475 aa11.91□□□□□ -0.5
RMDN3-209ENST00000560588 DLEC1Q9Y238 1755 aa11.91□□□□□ -0.5
RMDN3-209ENST00000560588 NUTM2BA6NNL0 878 aaPredicted RBP11.91□□□□□ -0.5
RMDN3-209ENST00000560588 NUTM2EB1AL46 878 aaPredicted RBP11.91□□□□□ -0.5
RMDN3-209ENST00000560588 RPS6KA4O75676 772 aa11.91□□□□□ -0.5
RMDN3-209ENST00000560588 FGRP09769 529 aa11.91□□□□□ -0.5
RMDN3-209ENST00000560588 RXRAP19793 462 aa11.91□□□□□ -0.5
RMDN3-209ENST00000560588 NUTM2AQ8IVF1 878 aaPredicted RBP11.91□□□□□ -0.5
RMDN3-209ENST00000560588 ZNF579Q8NAF0 562 aaKnown RBP11.91□□□□□ -0.5
RMDN3-209ENST00000560588 MIGA1Q8NAN2 632 aa11.91□□□□□ -0.5
RMDN3-209ENST00000560588 AIFM3Q96NN9 605 aa11.91□□□□□ -0.5
RMDN3-209ENST00000560588 RIOK1Q9BRS2 568 aaKnown RBP11.91□□□□□ -0.5
RMDN3-209ENST00000560588 FAM13BQ9NYF5 915 aa11.91□□□□□ -0.5
RMDN3-209ENST00000560588 ABCF2Q9UG63 623 aa11.91□□□□□ -0.5
RMDN3-209ENST00000560588 MYH13Q9UKX3 1938 aa11.91□□□□□ -0.5
RMDN3-209ENST00000560588 SNAP23O00161 211 aa11.9□□□□□ -0.5
RMDN3-209ENST00000560588 WDHD1O75717 1129 aaPredicted RBP11.9□□□□□ -0.5
RMDN3-209ENST00000560588 BMP15O95972 392 aa11.9□□□□□ -0.5
RMDN3-209ENST00000560588 SEC23AQ15436 765 aa11.9□□□□□ -0.5
RMDN3-209ENST00000560588 CATIPQ7Z7H3 387 aa11.9□□□□□ -0.5
RMDN3-209ENST00000560588 NBPF11Q86T75 865 aa11.9□□□□□ -0.5
RMDN3-209ENST00000560588 CCDC144CPQ8IYA2 1237 aa11.9□□□□□ -0.5
RMDN3-209ENST00000560588 NKX2-3Q8TAU0 364 aa11.9□□□□□ -0.5
RMDN3-209ENST00000560588 CCDC34Q96HJ3 373 aa11.9□□□□□ -0.5
RMDN3-209ENST00000560588 NLRP3Q96P20 1036 aa11.9□□□□□ -0.5
RMDN3-209ENST00000560588 GJB4Q9NTQ9 266 aa11.9□□□□□ -0.5
RMDN3-209ENST00000560588 TACC3Q9Y6A5 838 aa11.9□□□□□ -0.5
RMDN3-209ENST00000560588 MYH6P13533 1939 aa11.9□□□□□ -0.5
RMDN3-209ENST00000560588 DUOX1Q9NRD9 1551 aa11.9□□□□□ -0.5
RMDN3-209ENST00000560588 NRDCO43847 1150 aa11.9□□□□□ -0.51
RMDN3-209ENST00000560588 DDAH1O94760 285 aa11.9□□□□□ -0.51
RMDN3-209ENST00000560588 MARCKSP29966 332 aaPredicted RBP11.9□□□□□ -0.51
RMDN3-209ENST00000560588 GYG1P46976 350 aa11.9□□□□□ -0.51
RMDN3-209ENST00000560588 RPS8P62241 208 aaKnown RBP11.9□□□□□ -0.51
RMDN3-209ENST00000560588 SPTY2D1Q68D10 685 aaPredicted RBP11.9□□□□□ -0.51
RMDN3-209ENST00000560588 KANK3Q6NY19 840 aa11.9□□□□□ -0.51
RMDN3-209ENST00000560588 OLFM4Q6UX06 510 aa11.9□□□□□ -0.51
RMDN3-209ENST00000560588 IQCA1Q86XH1 822 aa11.9□□□□□ -0.51
RMDN3-209ENST00000560588 DIS3L2Q8IYB7 885 aaKnown RBP11.9□□□□□ -0.51
RMDN3-209ENST00000560588 CCDC150Q8NCX0 1101 aa11.9□□□□□ -0.51
RMDN3-209ENST00000560588 FAM84BQ96KN1 310 aaPredicted RBP11.9□□□□□ -0.51
RMDN3-209ENST00000560588 SETDB2Q96T68 719 aa11.9□□□□□ -0.51
RMDN3-209ENST00000560588 BCL11BQ9C0K0 894 aaPredicted RBP11.9□□□□□ -0.51
RMDN3-209ENST00000560588 OSBPL5Q9H0X9 879 aaPredicted RBP11.9□□□□□ -0.51
RMDN3-209ENST00000560588 KCND1Q9NSA2 647 aa11.9□□□□□ -0.51
RMDN3-209ENST00000560588 MROH7-TTC4A0A0A0MT08 1334 aa11.89□□□□□ -0.51
RMDN3-209ENST00000560588 MINDY4BA8MYZ0 360 aa11.89□□□□□ -0.51
RMDN3-209ENST00000560588 CBFA2T2O43439 604 aa11.89□□□□□ -0.51
RMDN3-209ENST00000560588 ORC4O43929 436 aa11.89□□□□□ -0.51
RMDN3-209ENST00000560588 SHC4Q6S5L8 630 aa11.89□□□□□ -0.51
RMDN3-209ENST00000560588 LRRC8AQ8IWT6 810 aa11.89□□□□□ -0.51
RMDN3-209ENST00000560588 ZSCAN10Q96SZ4 725 aaPredicted RBP11.89□□□□□ -0.51
RMDN3-209ENST00000560588 MYL10Q9BUA6 226 aa11.89□□□□□ -0.51
RMDN3-209ENST00000560588 CRNKL1Q9BZJ0 848 aaKnown RBP11.89□□□□□ -0.51
RMDN3-209ENST00000560588 INCENPQ9NQS7 918 aa11.89□□□□□ -0.51
RMDN3-209ENST00000560588 KIAA1551Q9HCM1 1747 aa11.89□□□□□ -0.51
RMDN3-209ENST00000560588 NHSQ6T4R5 1651 aa11.89□□□□□ -0.51
RMDN3-209ENST00000560588 PRPF3O43395 683 aaKnown RBP11.88□□□□□ -0.51
RMDN3-209ENST00000560588 KCNQ2O43526 872 aa11.88□□□□□ -0.51
RMDN3-209ENST00000560588 ZPR1O75312 459 aa11.88□□□□□ -0.51
RMDN3-209ENST00000560588 TPTE2Q6XPS3 522 aa11.88□□□□□ -0.51
RMDN3-209ENST00000560588 ATP8A2Q9NTI2 1148 aa11.88□□□□□ -0.51
RMDN3-209ENST00000560588 NRBP1Q9UHY1 535 aa11.88□□□□□ -0.51
RMDN3-209ENST00000560588 KCNH3Q9ULD8 1083 aa11.88□□□□□ -0.51
RMDN3-209ENST00000560588 LAMB1P07942 1786 aa11.88□□□□□ -0.51
RMDN3-209ENST00000560588 COL1A1P02452 1464 aaPredicted RBP11.88□□□□□ -0.51
RMDN3-209ENST00000560588 TNKSO95271 1327 aa11.88□□□□□ -0.51
RMDN3-209ENST00000560588 CCDC88AQ3V6T2 1871 aa11.88□□□□□ -0.51
RMDN3-209ENST00000560588 PTPREP23469 700 aa11.88□□□□□ -0.51
RMDN3-209ENST00000560588 HIBADHP31937 336 aaKnown RBP11.88□□□□□ -0.51
RMDN3-209ENST00000560588 DPCR1Q3MIW9 517 aa11.88□□□□□ -0.51
RMDN3-209ENST00000560588 KRBA2Q6ZNG9 492 aa11.88□□□□□ -0.51
RMDN3-209ENST00000560588 NBPF5PQ86XG9 351 aaPredicted RBP11.88□□□□□ -0.51
RMDN3-209ENST00000560588 C17orf53Q8N3J3 647 aaPredicted RBP11.88□□□□□ -0.51
RMDN3-209ENST00000560588 CACTINQ8WUQ7 758 aaKnown RBP11.88□□□□□ -0.51
RMDN3-209ENST00000560588 BRMS1Q9HCU9 246 aa11.88□□□□□ -0.51
RMDN3-209ENST00000560588 DACH1Q9UI36 760 aa11.88□□□□□ -0.51
RMDN3-209ENST00000560588 PAXBP1Q9Y5B6 917 aa11.88□□□□□ -0.51
RMDN3-209ENST00000560588 KIF2AO00139 706 aaPredicted RBP11.87□□□□□ -0.51
RMDN3-209ENST00000560588 FAM98CQ17RN3 349 aaKnown RBP11.87□□□□□ -0.51
RMDN3-209ENST00000560588 SBK1Q52WX2 424 aa11.87□□□□□ -0.51
RMDN3-209ENST00000560588 CT47A1Q5JQC4 288 aaPredicted RBP11.87□□□□□ -0.51
RMDN3-209ENST00000560588 IFIT1BQ5T764 474 aaKnown RBP11.87□□□□□ -0.51
RMDN3-209ENST00000560588 TBC1D9BQ66K14 1250 aa11.87□□□□□ -0.51
RMDN3-209ENST00000560588 ADGRA1Q86SQ6 560 aa11.87□□□□□ -0.51
RMDN3-209ENST00000560588 CNNM3Q8NE01 707 aa11.87□□□□□ -0.51
RMDN3-209ENST00000560588 NUP133Q8WUM0 1156 aa11.87□□□□□ -0.51
RMDN3-209ENST00000560588 KCNJ6P48051 423 aa11.87□□□□□ -0.51
RMDN3-209ENST00000560588 CCDC144BQ3MJ40 725 aa11.87□□□□□ -0.51
RMDN3-209ENST00000560588 GLIPR1L2Q4G1C9 344 aa11.87□□□□□ -0.51
RMDN3-209ENST00000560588 CCDC178Q5BJE1 867 aa11.87□□□□□ -0.51
RMDN3-209ENST00000560588 C3orf67Q6ZVT6 689 aa11.87□□□□□ -0.51
RMDN3-209ENST00000560588 NSUN4Q96CB9 384 aaKnown RBP11.87□□□□□ -0.51
RMDN3-209ENST00000560588 BCL2L12Q9HB09 334 aa11.87□□□□□ -0.51
RMDN3-209ENST00000560588 ARPP21Q9UBL0 812 aaPredicted RBP11.87□□□□□ -0.51
RMDN3-209ENST00000560588 SRPRBQ9Y5M8 271 aaKnown RBP11.87□□□□□ -0.51
RMDN3-209ENST00000560588 BTAF1O14981 1849 aa11.87□□□□□ -0.51
RMDN3-209ENST00000560588 COL4A1P02462 1669 aa11.86□□□□□ -0.51
RMDN3-209ENST00000560588 BTBD18B2RXH4 712 aa11.86□□□□□ -0.51
RMDN3-209ENST00000560588 TUBB4AP04350 444 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms