RNA–Protein interactions for RNA: ENST00000560532.1

SLTM-223, Transcript of SAFB like transcription modulator, human

TSL 4

Gene SLTM, Length 559 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SLTM-223	ENST00000560532	CARNS1	A5YM72	827 aa		7.58	□□□□□ -1.2
SLTM-223	ENST00000560532	FCGRT	P55899	365 aa		7.58	□□□□□ -1.2
SLTM-223	ENST00000560532	KCNA10	Q16322	511 aa		7.58	□□□□□ -1.2
SLTM-223	ENST00000560532	GPBAR1	Q8TDU6	330 aa		7.58	□□□□□ -1.2
SLTM-223	ENST00000560532	PICK1	Q9NRD5	415 aa		7.58	□□□□□ -1.2
SLTM-223	ENST00000560532		H3BRB1	525 aa		7.57	□□□□□ -1.2
SLTM-223	ENST00000560532	EIF1AY	O14602	144 aa	Known RBP	7.57	□□□□□ -1.2
SLTM-223	ENST00000560532	CIAPIN1	Q6FI81	312 aa		7.57	□□□□□ -1.2
SLTM-223	ENST00000560532	ATG14	Q6ZNE5	492 aa		7.57	□□□□□ -1.2
SLTM-223	ENST00000560532	AMIGO3	Q86WK7	504 aa		7.57	□□□□□ -1.2
SLTM-223	ENST00000560532	HSPA12B	Q96MM6	686 aa		7.57	□□□□□ -1.2
SLTM-223	ENST00000560532	FOXQ1	Q9C009	403 aa		7.57	□□□□□ -1.2
SLTM-223	ENST00000560532	TUT1	Q9H6E5	874 aa	Known RBP	7.57	□□□□□ -1.2
SLTM-223	ENST00000560532	CD320	Q9NPF0	282 aa		7.57	□□□□□ -1.2
SLTM-223	ENST00000560532	PRDM5	Q9NQX1	630 aa	Predicted RBP	7.57	□□□□□ -1.2
SLTM-223	ENST00000560532	TCAF2	A6NFQ2	919 aa		7.56	□□□□□ -1.2
SLTM-223	ENST00000560532	NDUFB5	O43674	189 aa		7.56	□□□□□ -1.2
SLTM-223	ENST00000560532	EOMES	O95936	686 aa		7.56	□□□□□ -1.2
SLTM-223	ENST00000560532	GDNF	P39905	211 aa		7.56	□□□□□ -1.2
SLTM-223	ENST00000560532	EPB41L4B	Q9H329	900 aa		7.56	□□□□□ -1.2
SLTM-223	ENST00000560532	DCP1A	Q9NPI6	582 aa	Predicted RBP	7.56	□□□□□ -1.2
SLTM-223	ENST00000560532	DCDC2C	A8MYV0	355 aa		7.55	□□□□□ -1.2
SLTM-223	ENST00000560532	ICMT	O60725	284 aa		7.55	□□□□□ -1.2
SLTM-223	ENST00000560532	ARNT	P27540	789 aa		7.55	□□□□□ -1.2
SLTM-223	ENST00000560532	NTF4	P34130	210 aa		7.55	□□□□□ -1.2
SLTM-223	ENST00000560532	PDE3B	Q13370	1112 aa		7.55	□□□□□ -1.2
SLTM-223	ENST00000560532	CDKAL1	Q5VV42	579 aa		7.55	□□□□□ -1.2
SLTM-223	ENST00000560532	MPRIP	Q6WCQ1	1025 aa		7.55	□□□□□ -1.2
SLTM-223	ENST00000560532	GLYCTK	Q8IVS8	523 aa		7.55	□□□□□ -1.2
SLTM-223	ENST00000560532	EPS8L3	Q8TE67	593 aa	Known RBP	7.55	□□□□□ -1.2
SLTM-223	ENST00000560532	FAM129B	Q96TA1	746 aa		7.55	□□□□□ -1.2
SLTM-223	ENST00000560532	CBX8	Q9HC52	389 aa		7.55	□□□□□ -1.2
SLTM-223	ENST00000560532	SEMA3G	Q9NS98	782 aa		7.55	□□□□□ -1.2
SLTM-223	ENST00000560532	PRR33	A8MZF0	331 aa		7.54	□□□□□ -1.2
SLTM-223	ENST00000560532	FAM155A	B1AL88	458 aa	Predicted RBP	7.54	□□□□□ -1.2
SLTM-223	ENST00000560532		H3BS24	57 aa		7.54	□□□□□ -1.2
SLTM-223	ENST00000560532	NIF3L1	Q9GZT8	377 aa		7.54	□□□□□ -1.2
SLTM-223	ENST00000560532	MAPK8IP1	Q9UQF2	711 aa		7.54	□□□□□ -1.2
SLTM-223	ENST00000560532	ETV2	O00321	342 aa	Predicted RBP	7.53	□□□□□ -1.2
SLTM-223	ENST00000560532	GPR182	O15218	404 aa		7.53	□□□□□ -1.2
SLTM-223	ENST00000560532	NUAK1	O60285	661 aa		7.53	□□□□□ -1.2
SLTM-223	ENST00000560532	HOXA5	P20719	270 aa		7.53	□□□□□ -1.2
SLTM-223	ENST00000560532	C12orf40	Q86WS4	652 aa		7.53	□□□□□ -1.2
SLTM-223	ENST00000560532	NPAS4	Q8IUM7	802 aa		7.53	□□□□□ -1.2
SLTM-223	ENST00000560532	KRTAP17-1	Q9BYP8	105 aa		7.53	□□□□□ -1.2
SLTM-223	ENST00000560532	DNAJC25	Q9H1X3	360 aa		7.53	□□□□□ -1.2
SLTM-223	ENST00000560532	NME2	P22392	152 aa		7.52	□□□□□ -1.21
SLTM-223	ENST00000560532	CDC37L1	Q7L3B6	337 aa		7.52	□□□□□ -1.21
SLTM-223	ENST00000560532	ARMCX6	Q7L4S7	300 aa		7.52	□□□□□ -1.21
SLTM-223	ENST00000560532	TMC1	Q8TDI8	760 aa		7.52	□□□□□ -1.21
SLTM-223	ENST00000560532	C20orf173	Q96LM9	149 aa		7.52	□□□□□ -1.21
SLTM-223	ENST00000560532	EGFL7	Q9UHF1	273 aa		7.52	□□□□□ -1.21
SLTM-223	ENST00000560532	SMG5	Q9UPR3	1016 aa	Known RBP	7.52	□□□□□ -1.21
SLTM-223	ENST00000560532	AKAP2	Q9Y2D5	859 aa		7.52	□□□□□ -1.21
SLTM-223	ENST00000560532	MED14OS	P0DP75	135 aa		7.51	□□□□□ -1.21
SLTM-223	ENST00000560532	SERPINB4	P48594	390 aa		7.51	□□□□□ -1.21
SLTM-223	ENST00000560532	ZNF252P-AS1	Q0IIN9	211 aa		7.51	□□□□□ -1.21
SLTM-223	ENST00000560532	PI16	Q6UXB8	463 aa		7.51	□□□□□ -1.21
SLTM-223	ENST00000560532	ABHD4	Q8TB40	342 aa		7.51	□□□□□ -1.21
SLTM-223	ENST00000560532	EMILIN2	Q9BXX0	1053 aa		7.51	□□□□□ -1.21
SLTM-223	ENST00000560532	SLAMF8	Q9P0V8	285 aa		7.51	□□□□□ -1.21
SLTM-223	ENST00000560532	TPX2	Q9ULW0	747 aa	Known RBP	7.51	□□□□□ -1.21
SLTM-223	ENST00000560532	JAG2	Q9Y219	1238 aa		7.51	□□□□□ -1.21
SLTM-223	ENST00000560532	LINC00310	P59036	64 aa		7.5	□□□□□ -1.21
SLTM-223	ENST00000560532	ARHGAP4	P98171	946 aa		7.5	□□□□□ -1.21
SLTM-223	ENST00000560532	FGD1	P98174	961 aa		7.5	□□□□□ -1.21
SLTM-223	ENST00000560532	MFSD4A	Q8N468	514 aa		7.5	□□□□□ -1.21
SLTM-223	ENST00000560532	ALPK1	Q96QP1	1244 aa		7.5	□□□□□ -1.21
SLTM-223	ENST00000560532	CNTNAP4	Q9C0A0	1308 aa		7.5	□□□□□ -1.21
SLTM-223	ENST00000560532	ARID3C	A6NKF2	412 aa		7.49	□□□□□ -1.21
SLTM-223	ENST00000560532	SLITRK5	O94991	958 aa		7.49	□□□□□ -1.21
SLTM-223	ENST00000560532	GLDC	P23378	1020 aa		7.49	□□□□□ -1.21
SLTM-223	ENST00000560532	ZBTB37	Q5TC79	503 aa		7.49	□□□□□ -1.21
SLTM-223	ENST00000560532	TTC6	Q86TZ1	520 aa		7.49	□□□□□ -1.21
SLTM-223	ENST00000560532	GRIN3A	Q8TCU5	1115 aa		7.49	□□□□□ -1.21
SLTM-223	ENST00000560532	KCNN1	Q92952	543 aa		7.49	□□□□□ -1.21
SLTM-223	ENST00000560532	CSRNP1	Q96S65	589 aa		7.49	□□□□□ -1.21
SLTM-223	ENST00000560532	IRF2BPL	Q9H1B7	796 aa		7.49	□□□□□ -1.21
SLTM-223	ENST00000560532	FANCG	O15287	622 aa		7.48	□□□□□ -1.21
SLTM-223	ENST00000560532	RAC2	P15153	192 aa		7.48	□□□□□ -1.21
SLTM-223	ENST00000560532	SFRP5	Q5T4F7	317 aa		7.48	□□□□□ -1.21
SLTM-223	ENST00000560532	CCDC120	Q96HB5	630 aa		7.48	□□□□□ -1.21
SLTM-223	ENST00000560532	PPP4R2	Q9NY27	417 aa		7.48	□□□□□ -1.21
SLTM-223	ENST00000560532	RBAK-RBAKDN	I3L0D1	243 aa		7.47	□□□□□ -1.21
SLTM-223	ENST00000560532	LRIG2	O94898	1065 aa		7.47	□□□□□ -1.21
SLTM-223	ENST00000560532	IGHA2	P01877	340 aa		7.47	□□□□□ -1.21
SLTM-223	ENST00000560532	XRCC5	P13010	732 aa	Known RBP	7.47	□□□□□ -1.21
SLTM-223	ENST00000560532	ERVFC1	P60507	584 aa		7.47	□□□□□ -1.21
SLTM-223	ENST00000560532	RING1	Q06587	406 aa		7.47	□□□□□ -1.21
SLTM-223	ENST00000560532	RELT	Q969Z4	430 aa		7.47	□□□□□ -1.21
SLTM-223	ENST00000560532	MIPEP	Q99797	713 aa		7.47	□□□□□ -1.21
SLTM-223	ENST00000560532	BCO2	Q9BYV7	579 aa		7.47	□□□□□ -1.21
SLTM-223	ENST00000560532	NLRP2	Q9NX02	1062 aa		7.47	□□□□□ -1.21
SLTM-223	ENST00000560532	CACNA2D2	Q9NY47	1150 aa		7.47	□□□□□ -1.21
SLTM-223	ENST00000560532	ST14	Q9Y5Y6	855 aa		7.47	□□□□□ -1.21
SLTM-223	ENST00000560532	DNAJC25-GNG10	A0A024R161	153 aa		7.46	□□□□□ -1.22
SLTM-223	ENST00000560532	UBE2F	Q969M7	185 aa		7.46	□□□□□ -1.22
SLTM-223	ENST00000560532	SLC26A8	Q96RN1	970 aa		7.46	□□□□□ -1.22
SLTM-223	ENST00000560532	CAPN6	Q9Y6Q1	641 aa		7.46	□□□□□ -1.22
SLTM-223	ENST00000560532	CBX7	O95931	251 aa		7.45	□□□□□ -1.22

Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms