RNA–Protein interactions for RNA: ENST00000560463.5

TRAF3-209, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-209ENST00000560463 CYP2D7A0A087X1C5 515 aa10.13□□□□□ -0.79
TRAF3-209ENST00000560463 MYO1BO43795 1136 aa10.13□□□□□ -0.79
TRAF3-209ENST00000560463 ENTPD3O75355 529 aa10.13□□□□□ -0.79
TRAF3-209ENST00000560463 HLA-DOAP06340 250 aa10.13□□□□□ -0.79
TRAF3-209ENST00000560463 PDIA4P13667 645 aaKnown RBP10.13□□□□□ -0.79
TRAF3-209ENST00000560463 PRELPP51888 382 aa10.13□□□□□ -0.79
TRAF3-209ENST00000560463 COL9A3Q14050 684 aaPredicted RBP10.13□□□□□ -0.79
TRAF3-209ENST00000560463 ME3Q16798 604 aa10.13□□□□□ -0.79
TRAF3-209ENST00000560463 CCDC178Q5BJE1 867 aa10.13□□□□□ -0.79
TRAF3-209ENST00000560463 PPP4R3CPQ6ZMV5 832 aa10.13□□□□□ -0.79
TRAF3-209ENST00000560463 C16orf86Q6ZW13 317 aa10.13□□□□□ -0.79
TRAF3-209ENST00000560463 NOL8Q76FK4 1167 aaKnown RBP10.13□□□□□ -0.79
TRAF3-209ENST00000560463 CYB5R4Q7L1T6 521 aa10.13□□□□□ -0.79
TRAF3-209ENST00000560463 IQCA1Q86XH1 822 aa10.13□□□□□ -0.79
TRAF3-209ENST00000560463 GPC2Q8N158 579 aa10.13□□□□□ -0.79
TRAF3-209ENST00000560463 TCEANC2Q96MN5 208 aa10.13□□□□□ -0.79
TRAF3-209ENST00000560463 EHD4Q9H223 541 aa10.13□□□□□ -0.79
TRAF3-209ENST00000560463 MKNK2Q9HBH9 465 aa10.13□□□□□ -0.79
TRAF3-209ENST00000560463 SWAP70Q9UH65 585 aa10.13□□□□□ -0.79
TRAF3-209ENST00000560463 TPCN1Q9ULQ1 816 aa10.13□□□□□ -0.79
TRAF3-209ENST00000560463 ZBTB12Q9Y330 459 aaPredicted RBP10.13□□□□□ -0.79
TRAF3-209ENST00000560463 TACC3Q9Y6A5 838 aa10.13□□□□□ -0.79
TRAF3-209ENST00000560463 UTRNP46939 3433 aa10.13□□□□□ -0.79
TRAF3-209ENST00000560463 SH2B2O14492 632 aaPredicted RBP10.12□□□□□ -0.79
TRAF3-209ENST00000560463 SOCS7O14512 581 aa10.12□□□□□ -0.79
TRAF3-209ENST00000560463 IFIT3O14879 490 aaKnown RBP10.12□□□□□ -0.79
TRAF3-209ENST00000560463 PFKFB2O60825 505 aa10.12□□□□□ -0.79
TRAF3-209ENST00000560463 DDIT3P35638 169 aa10.12□□□□□ -0.79
TRAF3-209ENST00000560463 PLCD1P51178 756 aa10.12□□□□□ -0.79
TRAF3-209ENST00000560463 ZNF280AP59817 542 aaPredicted RBP10.12□□□□□ -0.79
TRAF3-209ENST00000560463 PICALMQ13492 652 aa10.12□□□□□ -0.79
TRAF3-209ENST00000560463 RRP12Q5JTH9 1297 aaKnown RBP10.12□□□□□ -0.79
TRAF3-209ENST00000560463 CHST3Q7LGC8 479 aa10.12□□□□□ -0.79
TRAF3-209ENST00000560463 SGMS1Q86VZ5 419 aa10.12□□□□□ -0.79
TRAF3-209ENST00000560463 SPRYD3Q8NCJ5 442 aa10.12□□□□□ -0.79
TRAF3-209ENST00000560463 IGDCC4Q8TDY8 1250 aa10.12□□□□□ -0.79
TRAF3-209ENST00000560463 ZBED3Q96IU2 234 aaPredicted RBP10.12□□□□□ -0.79
TRAF3-209ENST00000560463 PRMT6Q96LA8 375 aaPredicted RBP10.12□□□□□ -0.79
TRAF3-209ENST00000560463 UBAC1Q9BSL1 405 aa10.12□□□□□ -0.79
TRAF3-209ENST00000560463 LRRC2Q9BYS8 371 aa10.12□□□□□ -0.79
TRAF3-209ENST00000560463 TDRD3Q9H7E2 651 aaKnown RBP10.12□□□□□ -0.79
TRAF3-209ENST00000560463 MYOZ2Q9NPC6 264 aa10.12□□□□□ -0.79
TRAF3-209ENST00000560463 DDX4Q9NQI0 724 aaKnown RBP10.12□□□□□ -0.79
TRAF3-209ENST00000560463 CHMP5Q9NZZ3 219 aa10.12□□□□□ -0.79
TRAF3-209ENST00000560463 SAP30BPQ9UHR5 308 aaKnown RBP10.12□□□□□ -0.79
TRAF3-209ENST00000560463 DOCK1Q14185 1865 aa10.12□□□□□ -0.79
TRAF3-209ENST00000560463 ATRNL1Q5VV63 1379 aa10.12□□□□□ -0.79
TRAF3-209ENST00000560463 ZC3H4Q9UPT8 1303 aaKnown RBP10.11□□□□□ -0.79
TRAF3-209ENST00000560463 DHX16O60231 1041 aaKnown RBP10.11□□□□□ -0.79
TRAF3-209ENST00000560463 GRIN3BO60391 1043 aa10.11□□□□□ -0.79
TRAF3-209ENST00000560463 RANBP6O60518 1105 aaKnown RBP10.11□□□□□ -0.79
TRAF3-209ENST00000560463 LARGE1O95461 756 aa10.11□□□□□ -0.79
TRAF3-209ENST00000560463 CYP2D6P10635 497 aa10.11□□□□□ -0.79
TRAF3-209ENST00000560463 YBX3P16989 372 aaKnown RBP eCLIP10.11□□□□□ -0.79
TRAF3-209ENST00000560463 CDK8P49336 464 aa10.11□□□□□ -0.79
TRAF3-209ENST00000560463 RCAN1P53805 252 aa10.11□□□□□ -0.79
TRAF3-209ENST00000560463 APOBRQ0VD83 1088 aa10.11□□□□□ -0.79
TRAF3-209ENST00000560463 WTAPQ15007 396 aa10.11□□□□□ -0.79
TRAF3-209ENST00000560463 SPDYE2Q495Y8 402 aa10.11□□□□□ -0.79
TRAF3-209ENST00000560463 TMEM67Q5HYA8 995 aa10.11□□□□□ -0.79
TRAF3-209ENST00000560463 FAM83AQ86UY5 434 aa10.11□□□□□ -0.79
TRAF3-209ENST00000560463 ZNF444Q8N0Y2 327 aaPredicted RBP10.11□□□□□ -0.79
TRAF3-209ENST00000560463 GTF3C6Q969F1 213 aa10.11□□□□□ -0.79
TRAF3-209ENST00000560463 ZSCAN10Q96SZ4 725 aaPredicted RBP10.11□□□□□ -0.79
TRAF3-209ENST00000560463 LLPHQ9BRT6 129 aaKnown RBP10.11□□□□□ -0.79
TRAF3-209ENST00000560463 SLKQ9H2G2 1235 aaPredicted RBP10.11□□□□□ -0.79
TRAF3-209ENST00000560463 LY9Q9HBG7 655 aa10.11□□□□□ -0.79
TRAF3-209ENST00000560463 INCENPQ9NQS7 918 aa10.11□□□□□ -0.79
TRAF3-209ENST00000560463 TCP11L1Q9NUJ3 509 aa10.11□□□□□ -0.79
TRAF3-209ENST00000560463 FAM198AQ9UFP1 575 aa10.11□□□□□ -0.79
TRAF3-209ENST00000560463 SERPINB13Q9UIV8 391 aa10.11□□□□□ -0.79
TRAF3-209ENST00000560463 NID2Q14112 1375 aa10.11□□□□□ -0.79
TRAF3-209ENST00000560463 KLF18A0A0U1RQI7 1052 aa10.1□□□□□ -0.79
TRAF3-209ENST00000560463 CCDC69A6NI79 296 aa10.1□□□□□ -0.79
TRAF3-209ENST00000560463 TSPY2A6NKD2 308 aa10.1□□□□□ -0.79
TRAF3-209ENST00000560463 H7C1D1 291 aa10.1□□□□□ -0.79
TRAF3-209ENST00000560463 PRDM1O75626 825 aa10.1□□□□□ -0.79
TRAF3-209ENST00000560463 PDIA3P30101 505 aaKnown RBP10.1□□□□□ -0.79
TRAF3-209ENST00000560463 TNNI2P48788 182 aa10.1□□□□□ -0.79
TRAF3-209ENST00000560463 GMPSP49915 693 aaPredicted RBP10.1□□□□□ -0.79
TRAF3-209ENST00000560463 GABPAQ06546 454 aa10.1□□□□□ -0.79
TRAF3-209ENST00000560463 NFIAQ12857 509 aa10.1□□□□□ -0.79
TRAF3-209ENST00000560463 PPP2R5BQ15173 497 aa10.1□□□□□ -0.79
TRAF3-209ENST00000560463 SEC23AQ15436 765 aa10.1□□□□□ -0.79
TRAF3-209ENST00000560463 SYNE3Q6ZMZ3 975 aa10.1□□□□□ -0.79
TRAF3-209ENST00000560463 METTL16Q86W50 562 aaKnown RBP10.1□□□□□ -0.79
TRAF3-209ENST00000560463 FOXP4Q8IVH2 680 aaPredicted RBP10.1□□□□□ -0.79
TRAF3-209ENST00000560463 CCDC83Q8IWF9 413 aa10.1□□□□□ -0.79
TRAF3-209ENST00000560463 STK11IPQ8N1F8 1099 aa10.1□□□□□ -0.79
TRAF3-209ENST00000560463 FAM151AQ8WW52 585 aa10.1□□□□□ -0.79
TRAF3-209ENST00000560463 PI4KBQ9UBF8 816 aa10.1□□□□□ -0.79
TRAF3-209ENST00000560463 ZNF70Q9UC06 446 aaPredicted RBP10.1□□□□□ -0.79
TRAF3-209ENST00000560463 CNOT7Q9UIV1 285 aaKnown RBP10.1□□□□□ -0.79
TRAF3-209ENST00000560463 SMC3Q9UQE7 1217 aa10.1□□□□□ -0.79
TRAF3-209ENST00000560463 PCDHAC2Q9Y5I4 1007 aa10.1□□□□□ -0.79
TRAF3-209ENST00000560463 GJA3Q9Y6H8 435 aa10.1□□□□□ -0.79
TRAF3-209ENST00000560463 PLIN4Q96Q06 1357 aa10.1□□□□□ -0.79
TRAF3-209ENST00000560463 WDR90Q96KV7 1748 aa10.1□□□□□ -0.79
TRAF3-209ENST00000560463 PHIPQ8WWQ0 1821 aa10.1□□□□□ -0.79
TRAF3-209ENST00000560463 TNKSO95271 1327 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms