RNA–Protein interactions for RNA: ENST00000560369.5

LRRC49-223, Transcript of leucine rich repeat containing 49, human

APPRIS ALT1 TSL 2 BASIC

Gene LRRC49, Length 2,586 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LRRC49-223	ENST00000560369	BARGIN	Q6ZT62	677 aa		6.69	□□□□□ -1.34
LRRC49-223	ENST00000560369	NBPF11	Q86T75	865 aa		6.69	□□□□□ -1.34
LRRC49-223	ENST00000560369	ANKRD18A	Q8IVF6	992 aa		6.69	□□□□□ -1.34
LRRC49-223	ENST00000560369	DRC7	Q8IY82	874 aa		6.69	□□□□□ -1.34
LRRC49-223	ENST00000560369	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	6.69	□□□□□ -1.34
LRRC49-223	ENST00000560369	WDR19	Q8NEZ3	1342 aa		6.68	□□□□□ -1.34
LRRC49-223	ENST00000560369	USP27X	A6NNY8	438 aa		6.68	□□□□□ -1.34
LRRC49-223	ENST00000560369	GNPAT	O15228	680 aa		6.68	□□□□□ -1.34
LRRC49-223	ENST00000560369	ZNF202	O95125	648 aa		6.68	□□□□□ -1.34
LRRC49-223	ENST00000560369	CHAF1A	Q13111	956 aa	Predicted RBP	6.68	□□□□□ -1.34
LRRC49-223	ENST00000560369	USP49	Q70CQ1	688 aa		6.68	□□□□□ -1.34
LRRC49-223	ENST00000560369	SGMS1	Q86VZ5	419 aa		6.68	□□□□□ -1.34
LRRC49-223	ENST00000560369	FOXP4	Q8IVH2	680 aa	Predicted RBP	6.68	□□□□□ -1.34
LRRC49-223	ENST00000560369	AK7	Q96M32	723 aa		6.68	□□□□□ -1.34
LRRC49-223	ENST00000560369	SDF4	Q9BRK5	362 aa		6.68	□□□□□ -1.34
LRRC49-223	ENST00000560369	CDCA7	Q9BWT1	371 aa	Predicted RBP	6.68	□□□□□ -1.34
LRRC49-223	ENST00000560369	POLR3E	Q9NVU0	708 aa		6.68	□□□□□ -1.34
LRRC49-223	ENST00000560369	SLC12A7	Q9Y666	1083 aa		6.68	□□□□□ -1.34
LRRC49-223	ENST00000560369	DLEC1	Q9Y238	1755 aa		6.68	□□□□□ -1.34
LRRC49-223	ENST00000560369	RTL9	Q8NET4	1388 aa		6.68	□□□□□ -1.34
LRRC49-223	ENST00000560369	MAGEB6P1	A0A0J9YX57	407 aa		6.68	□□□□□ -1.34
LRRC49-223	ENST00000560369	CCDC69	A6NI79	296 aa		6.68	□□□□□ -1.34
LRRC49-223	ENST00000560369	RIOK3	O14730	519 aa	Known RBP	6.68	□□□□□ -1.34
LRRC49-223	ENST00000560369	DHX16	O60231	1041 aa	Known RBP	6.68	□□□□□ -1.34
LRRC49-223	ENST00000560369	PLEKHA8P1	O95397	391 aa		6.68	□□□□□ -1.34
LRRC49-223	ENST00000560369	GTF2E1	P29083	439 aa	Predicted RBP	6.68	□□□□□ -1.34
LRRC49-223	ENST00000560369	TM4SF1	P30408	202 aa		6.68	□□□□□ -1.34
LRRC49-223	ENST00000560369	PNOC	Q13519	176 aa		6.68	□□□□□ -1.34
LRRC49-223	ENST00000560369	SLC39A14	Q15043	492 aa		6.68	□□□□□ -1.34
LRRC49-223	ENST00000560369	SF3B3	Q15393	1217 aa	Known RBP	6.68	□□□□□ -1.34
LRRC49-223	ENST00000560369	SEC23A	Q15436	765 aa		6.68	□□□□□ -1.34
LRRC49-223	ENST00000560369	STX1A	Q16623	288 aa		6.68	□□□□□ -1.34
LRRC49-223	ENST00000560369	FAM47A	Q5JRC9	791 aa		6.68	□□□□□ -1.34
LRRC49-223	ENST00000560369	GRAMD1C	Q8IYS0	662 aa		6.68	□□□□□ -1.34
LRRC49-223	ENST00000560369	STAG1	Q8WVM7	1258 aa		6.68	□□□□□ -1.34
LRRC49-223	ENST00000560369	TMEM87B	Q96K49	555 aa		6.68	□□□□□ -1.34
LRRC49-223	ENST00000560369	PRIMPOL	Q96LW4	560 aa		6.68	□□□□□ -1.34
LRRC49-223	ENST00000560369	AATF	Q9NY61	560 aa	Known RBP eCLIP	6.68	□□□□□ -1.34
LRRC49-223	ENST00000560369	KIF3A	Q9Y496	699 aa		6.68	□□□□□ -1.34
LRRC49-223	ENST00000560369	DUOX1	Q9NRD9	1551 aa		6.68	□□□□□ -1.34
LRRC49-223	ENST00000560369	COL24A1	Q17RW2	1714 aa		6.68	□□□□□ -1.34
LRRC49-223	ENST00000560369	TNKS	O95271	1327 aa		6.68	□□□□□ -1.34
LRRC49-223	ENST00000560369	PNPLA7	Q6ZV29	1317 aa		6.68	□□□□□ -1.34
LRRC49-223	ENST00000560369	MECOM	Q03112	1051 aa		6.67	□□□□□ -1.34
LRRC49-223	ENST00000560369	DMTN	Q08495	405 aa		6.67	□□□□□ -1.34
LRRC49-223	ENST00000560369	WTAP	Q15007	396 aa		6.67	□□□□□ -1.34
LRRC49-223	ENST00000560369	LONRF3	Q496Y0	759 aa		6.67	□□□□□ -1.34
LRRC49-223	ENST00000560369	HSP90AA4P	Q58FG1	418 aa		6.67	□□□□□ -1.34
LRRC49-223	ENST00000560369	SYNE3	Q6ZMZ3	975 aa		6.67	□□□□□ -1.34
LRRC49-223	ENST00000560369	RASGRP2	Q7LDG7	609 aa		6.67	□□□□□ -1.34
LRRC49-223	ENST00000560369	ZNF654	Q8IZM8	581 aa		6.67	□□□□□ -1.34
LRRC49-223	ENST00000560369	ENAH	Q8N8S7	591 aa	Predicted RBP	6.67	□□□□□ -1.34
LRRC49-223	ENST00000560369	ARHGEF1	Q92888	912 aa	Known RBP	6.67	□□□□□ -1.34
LRRC49-223	ENST00000560369	HSD3B7	Q9H2F3	369 aa		6.67	□□□□□ -1.34
LRRC49-223	ENST00000560369	SPTLC3	Q9NUV7	552 aa		6.67	□□□□□ -1.34
LRRC49-223	ENST00000560369	BSDC1	Q9NW68	430 aa	Predicted RBP	6.67	□□□□□ -1.34
LRRC49-223	ENST00000560369	KIAA1468	Q9P260	1216 aa		6.67	□□□□□ -1.34
LRRC49-223	ENST00000560369	CLIP2	Q9UDT6	1046 aa		6.67	□□□□□ -1.34
LRRC49-223	ENST00000560369	PCDHB6	Q9Y5E3	794 aa		6.67	□□□□□ -1.34
LRRC49-223	ENST00000560369	LAMB1	P07942	1786 aa		6.67	□□□□□ -1.34
LRRC49-223	ENST00000560369	KIAA1551	Q9HCM1	1747 aa		6.67	□□□□□ -1.34
LRRC49-223	ENST00000560369		A0A0U1RQG5	324 aa	Predicted RBP	6.67	□□□□□ -1.34
LRRC49-223	ENST00000560369		A0A1W2PQ27	194 aa		6.67	□□□□□ -1.34
LRRC49-223	ENST00000560369		A0A1W2PQ64	194 aa		6.67	□□□□□ -1.34
LRRC49-223	ENST00000560369		A0A1W2PQD8	194 aa		6.67	□□□□□ -1.34
LRRC49-223	ENST00000560369	USP17L12	C9JPN9	530 aa		6.67	□□□□□ -1.34
LRRC49-223	ENST00000560369	USP17L21	D6R901	530 aa		6.67	□□□□□ -1.34
LRRC49-223	ENST00000560369	FMNL1	O95466	1100 aa	Predicted RBP	6.67	□□□□□ -1.34
LRRC49-223	ENST00000560369	YEATS4	O95619	227 aa		6.67	□□□□□ -1.34
LRRC49-223	ENST00000560369	MYCN	P04198	464 aa	Predicted RBP	6.67	□□□□□ -1.34
LRRC49-223	ENST00000560369	ATP1A3	P13637	1013 aa		6.67	□□□□□ -1.34
LRRC49-223	ENST00000560369	BMP6	P22004	513 aa		6.67	□□□□□ -1.34
LRRC49-223	ENST00000560369	U2AF2	P26368	475 aa	Known RBP eCLIP	6.67	□□□□□ -1.34
LRRC49-223	ENST00000560369	LIFR	P42702	1097 aa		6.67	□□□□□ -1.34
LRRC49-223	ENST00000560369	SSRP1	Q08945	709 aa	Known RBP	6.67	□□□□□ -1.34
LRRC49-223	ENST00000560369	GOLGA8F	Q08AF8	430 aa		6.67	□□□□□ -1.34
LRRC49-223	ENST00000560369	GOLGA8DP	Q0D2H9	430 aa		6.67	□□□□□ -1.34
LRRC49-223	ENST00000560369	NFIX	Q14938	502 aa		6.67	□□□□□ -1.34
LRRC49-223	ENST00000560369	CTR9	Q6PD62	1173 aa		6.67	□□□□□ -1.34
LRRC49-223	ENST00000560369	BRAP	Q7Z569	592 aa		6.67	□□□□□ -1.34
LRRC49-223	ENST00000560369	FILIP1	Q7Z7B0	1213 aa		6.67	□□□□□ -1.34
LRRC49-223	ENST00000560369	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	6.67	□□□□□ -1.34
LRRC49-223	ENST00000560369	CDC5L	Q99459	802 aa	Known RBP	6.67	□□□□□ -1.34
LRRC49-223	ENST00000560369	VPS54	Q9P1Q0	977 aa		6.67	□□□□□ -1.34
LRRC49-223	ENST00000560369	PRR29	P0C7W0	189 aa		6.66	□□□□□ -1.34
LRRC49-223	ENST00000560369	CASP1	P29466	404 aa		6.66	□□□□□ -1.34
LRRC49-223	ENST00000560369	GTF2F1	P35269	517 aa	Known RBP eCLIP	6.66	□□□□□ -1.34
LRRC49-223	ENST00000560369	RPS8	P62241	208 aa	Known RBP	6.66	□□□□□ -1.34
LRRC49-223	ENST00000560369	PDE4B	Q07343	736 aa		6.66	□□□□□ -1.34
LRRC49-223	ENST00000560369	NCAPH	Q15003	741 aa		6.66	□□□□□ -1.34
LRRC49-223	ENST00000560369	PKN1	Q16512	942 aa		6.66	□□□□□ -1.34
LRRC49-223	ENST00000560369	RTN1	Q16799	776 aa		6.66	□□□□□ -1.34
LRRC49-223	ENST00000560369	FBXO33	Q7Z6M2	555 aa		6.66	□□□□□ -1.34
LRRC49-223	ENST00000560369	METTL16	Q86W50	562 aa	Known RBP	6.66	□□□□□ -1.34
LRRC49-223	ENST00000560369	NBPF5P	Q86XG9	351 aa	Predicted RBP	6.66	□□□□□ -1.34
LRRC49-223	ENST00000560369	DIS3L2	Q8IYB7	885 aa	Known RBP	6.66	□□□□□ -1.34
LRRC49-223	ENST00000560369	FANCB	Q8NB91	859 aa		6.66	□□□□□ -1.34
LRRC49-223	ENST00000560369	DPF2	Q92785	391 aa		6.66	□□□□□ -1.34
LRRC49-223	ENST00000560369	NSUN4	Q96CB9	384 aa	Known RBP	6.66	□□□□□ -1.34
LRRC49-223	ENST00000560369	LRRC4B	Q9NT99	713 aa		6.66	□□□□□ -1.34

Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms