RNA–Protein interactions for RNA: ENST00000560004.5

RORA-212, Transcript of RAR related orphan receptor A, humanhuman

TSL 4

Gene RORA, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RORA-212ENST00000560004 CSRNP1Q96S65 589 aa13.63□□□□□ -0.23
RORA-212ENST00000560004 USP26Q9BXU7 913 aa13.63□□□□□ -0.23
RORA-212ENST00000560004 BACH2Q9BYV9 841 aa13.63□□□□□ -0.23
RORA-212ENST00000560004 EHD4Q9H223 541 aa13.63□□□□□ -0.23
RORA-212ENST00000560004 DHX36Q9H2U1 1008 aaKnown RBP13.63□□□□□ -0.23
RORA-212ENST00000560004 ANAPC4Q9UJX5 808 aa13.63□□□□□ -0.23
RORA-212ENST00000560004 U3KPZ7 1027 aaPredicted RBP13.63□□□□□ -0.23
RORA-212ENST00000560004 FAM196BA6NMK8 535 aa13.62□□□□□ -0.23
RORA-212ENST00000560004 EPB41L2O43491 1005 aaKnown RBP13.62□□□□□ -0.23
RORA-212ENST00000560004 ITGBL1O95965 494 aaPredicted RBP13.62□□□□□ -0.23
RORA-212ENST00000560004 CYP21A2P08686 494 aa13.62□□□□□ -0.23
RORA-212ENST00000560004 HAND2P61296 217 aa13.62□□□□□ -0.23
RORA-212ENST00000560004 PPARAQ07869 468 aa13.62□□□□□ -0.23
RORA-212ENST00000560004 NECTIN1Q15223 517 aa13.62□□□□□ -0.23
RORA-212ENST00000560004 KIAA1211Q6ZU35 1233 aa13.62□□□□□ -0.23
RORA-212ENST00000560004 SLC44A5Q8NCS7 719 aa13.62□□□□□ -0.23
RORA-212ENST00000560004 NKX2-3Q8TAU0 364 aa13.62□□□□□ -0.23
RORA-212ENST00000560004 DYNLL2Q96FJ2 89 aa13.62□□□□□ -0.23
RORA-212ENST00000560004 SLC27A2O14975 620 aa13.61□□□□□ -0.23
RORA-212ENST00000560004 POLR3DP05423 398 aaPredicted RBP13.61□□□□□ -0.23
RORA-212ENST00000560004 HLA-DOAP06340 250 aa13.61□□□□□ -0.23
RORA-212ENST00000560004 HSPA4P34932 840 aa13.61□□□□□ -0.23
RORA-212ENST00000560004 MAP3K10Q02779 954 aa13.61□□□□□ -0.23
RORA-212ENST00000560004 CTDSPL2Q05D32 466 aa13.61□□□□□ -0.23
RORA-212ENST00000560004 CREB3L3Q68CJ9 461 aa13.61□□□□□ -0.23
RORA-212ENST00000560004 STOX1Q6ZVD7 989 aa13.61□□□□□ -0.23
RORA-212ENST00000560004 C16orf86Q6ZW13 317 aa13.61□□□□□ -0.23
RORA-212ENST00000560004 ZSCAN29Q8IWY8 852 aaPredicted RBP13.61□□□□□ -0.23
RORA-212ENST00000560004 RBM46Q8TBY0 533 aaKnown RBP13.61□□□□□ -0.23
RORA-212ENST00000560004 KCNB2Q92953 911 aa13.61□□□□□ -0.23
RORA-212ENST00000560004 DDRGK1Q96HY6 314 aa13.61□□□□□ -0.23
RORA-212ENST00000560004 FZD1Q9UP38 647 aa13.61□□□□□ -0.23
RORA-212ENST00000560004 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.61□□□□□ -0.23
RORA-212ENST00000560004 PHIPQ8WWQ0 1821 aa13.61□□□□□ -0.23
RORA-212ENST00000560004 NEDD4P46934 1319 aa13.61□□□□□ -0.23
RORA-212ENST00000560004 PASKQ96RG2 1323 aa13.61□□□□□ -0.23
RORA-212ENST00000560004 MINDY4BA8MYZ0 360 aa13.6□□□□□ -0.23
RORA-212ENST00000560004 SHMT1P34896 483 aa13.6□□□□□ -0.23
RORA-212ENST00000560004 COL9A3Q14050 684 aaPredicted RBP13.6□□□□□ -0.23
RORA-212ENST00000560004 TTC6Q86TZ1 520 aa13.6□□□□□ -0.23
RORA-212ENST00000560004 STAG1Q8WVM7 1258 aa13.6□□□□□ -0.23
RORA-212ENST00000560004 PI4KBQ9UBF8 816 aa13.6□□□□□ -0.23
RORA-212ENST00000560004 CTNNA3Q9UI47 895 aa13.6□□□□□ -0.23
RORA-212ENST00000560004 SERPINB13Q9UIV8 391 aa13.6□□□□□ -0.23
RORA-212ENST00000560004 TBC1D12O60347 775 aa13.59□□□□□ -0.23
RORA-212ENST00000560004 TOMM70O94826 608 aa13.59□□□□□ -0.23
RORA-212ENST00000560004 FGRP09769 529 aa13.59□□□□□ -0.23
RORA-212ENST00000560004 RRP1BQ14684 758 aaKnown RBP13.59□□□□□ -0.23
RORA-212ENST00000560004 IMMTQ16891 758 aaKnown RBP13.59□□□□□ -0.23
RORA-212ENST00000560004 RASEFQ8IZ41 740 aa13.59□□□□□ -0.23
RORA-212ENST00000560004 SMC1BQ8NDV3 1235 aa13.59□□□□□ -0.23
RORA-212ENST00000560004 INCENPQ9NQS7 918 aa13.59□□□□□ -0.23
RORA-212ENST00000560004 HERC5Q9UII4 1024 aaKnown RBP13.59□□□□□ -0.23
RORA-212ENST00000560004 PHF20L1A8MW92 1017 aa13.58□□□□□ -0.24
RORA-212ENST00000560004 ZNF213O14771 459 aa13.58□□□□□ -0.24
RORA-212ENST00000560004 CDK8P49336 464 aa13.58□□□□□ -0.24
RORA-212ENST00000560004 SHROOM1Q2M3G4 852 aaPredicted RBP13.58□□□□□ -0.24
RORA-212ENST00000560004 TATDN1Q6P1N9 297 aa13.58□□□□□ -0.24
RORA-212ENST00000560004 MIGA2Q7L4E1 593 aa13.58□□□□□ -0.24
RORA-212ENST00000560004 AMOTL1Q8IY63 956 aa13.58□□□□□ -0.24
RORA-212ENST00000560004 STK11IPQ8N1F8 1099 aa13.58□□□□□ -0.24
RORA-212ENST00000560004 PLIN4Q96Q06 1357 aa13.58□□□□□ -0.24
RORA-212ENST00000560004 E7EWF7 191 aa13.57□□□□□ -0.24
RORA-212ENST00000560004 PRDM1O75626 825 aa13.57□□□□□ -0.24
RORA-212ENST00000560004 RASA1P20936 1047 aa13.57□□□□□ -0.24
RORA-212ENST00000560004 JAG1P78504 1218 aa13.57□□□□□ -0.24
RORA-212ENST00000560004 SUPT20HL1Q3ZLR7 823 aa13.57□□□□□ -0.24
RORA-212ENST00000560004 AKNAD1Q5T1N1 836 aa13.57□□□□□ -0.24
RORA-212ENST00000560004 MOB2Q70IA6 237 aa13.57□□□□□ -0.24
RORA-212ENST00000560004 FOXP4Q8IVH2 680 aaPredicted RBP13.57□□□□□ -0.24
RORA-212ENST00000560004 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.57□□□□□ -0.24
RORA-212ENST00000560004 IL17RAQ96F46 866 aa13.57□□□□□ -0.24
RORA-212ENST00000560004 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.57□□□□□ -0.24
RORA-212ENST00000560004 SWAP70Q9UH65 585 aa13.57□□□□□ -0.24
RORA-212ENST00000560004 ZNF112Q9UJU3 913 aa13.57□□□□□ -0.24
RORA-212ENST00000560004 SNX14Q9Y5W7 946 aa13.57□□□□□ -0.24
RORA-212ENST00000560004 ORC4O43929 436 aa13.56□□□□□ -0.24
RORA-212ENST00000560004 USP2O75604 605 aaPredicted RBP13.56□□□□□ -0.24
RORA-212ENST00000560004 MAP3K11Q16584 847 aa13.56□□□□□ -0.24
RORA-212ENST00000560004 ADCK5Q3MIX3 580 aa13.56□□□□□ -0.24
RORA-212ENST00000560004 TSGA10IPQ3SY00 556 aa13.56□□□□□ -0.24
RORA-212ENST00000560004 CST9Q5W186 159 aa13.56□□□□□ -0.24
RORA-212ENST00000560004 DCAF15Q66K64 600 aa13.56□□□□□ -0.24
RORA-212ENST00000560004 CRACR2BQ8N4Y2 399 aaPredicted RBP13.56□□□□□ -0.24
RORA-212ENST00000560004 KLRG1Q96E93 195 aa13.56□□□□□ -0.24
RORA-212ENST00000560004 ZNF341Q9BYN7 854 aa13.56□□□□□ -0.24
RORA-212ENST00000560004 ZNF408Q9H9D4 720 aa13.56□□□□□ -0.24
RORA-212ENST00000560004 TAOK2Q9UL54 1235 aa13.56□□□□□ -0.24
RORA-212ENST00000560004 PTPRFP10586 1907 aa13.56□□□□□ -0.24
RORA-212ENST00000560004 EIF5BO60841 1220 aaKnown RBP13.55□□□□□ -0.24
RORA-212ENST00000560004 CELF2O95319 508 aaKnown RBP13.55□□□□□ -0.24
RORA-212ENST00000560004 GDF11O95390 407 aa13.55□□□□□ -0.24
RORA-212ENST00000560004 AKR1B1P15121 316 aa13.55□□□□□ -0.24
RORA-212ENST00000560004 INPP5BP32019 993 aa13.55□□□□□ -0.24
RORA-212ENST00000560004 RBM25P49756 843 aaKnown RBP13.55□□□□□ -0.24
RORA-212ENST00000560004 FSTL1Q12841 308 aa13.55□□□□□ -0.24
RORA-212ENST00000560004 PRKG1Q13976 671 aa13.55□□□□□ -0.24
RORA-212ENST00000560004 HOOK2Q96ED9 719 aa13.55□□□□□ -0.24
RORA-212ENST00000560004 TBC1D32Q96NH3 1257 aa13.55□□□□□ -0.24
RORA-212ENST00000560004 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms