RNA–Protein interactions for RNA: ENST00000559850.5

RABGGTA-211, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-211ENST00000559850 GTF2A2P52657 109 aa17.98■□□□□ 0.47
RABGGTA-211ENST00000559850 INHBEP58166 350 aa17.98■□□□□ 0.47
RABGGTA-211ENST00000559850 SCYL3Q8IZE3 742 aa17.98■□□□□ 0.47
RABGGTA-211ENST00000559850 LCORLQ8N3X6 602 aa17.98■□□□□ 0.47
RABGGTA-211ENST00000559850 ARMT1Q9H993 441 aa17.98■□□□□ 0.47
RABGGTA-211ENST00000559850 PPATQ06203 517 aa17.97■□□□□ 0.47
RABGGTA-211ENST00000559850 SHROOM1Q2M3G4 852 aaPredicted RBP17.97■□□□□ 0.47
RABGGTA-211ENST00000559850 FAM43AQ8N2R8 423 aa17.97■□□□□ 0.47
RABGGTA-211ENST00000559850 GPATCH3Q96I76 525 aa17.97■□□□□ 0.47
RABGGTA-211ENST00000559850 GPR25O00155 361 aa17.96■□□□□ 0.47
RABGGTA-211ENST00000559850 TBC1D12O60347 775 aa17.96■□□□□ 0.47
RABGGTA-211ENST00000559850 EVX2Q03828 476 aa17.96■□□□□ 0.47
RABGGTA-211ENST00000559850 CRHR2Q13324 411 aa17.96■□□□□ 0.47
RABGGTA-211ENST00000559850 B4GALNT3Q6L9W6 998 aa17.96■□□□□ 0.47
RABGGTA-211ENST00000559850 SDR42E1Q8WUS8 393 aa17.96■□□□□ 0.47
RABGGTA-211ENST00000559850 ZNF296Q8WUU4 475 aaPredicted RBP17.96■□□□□ 0.47
RABGGTA-211ENST00000559850 DNAJC18Q9H819 358 aa17.96■□□□□ 0.47
RABGGTA-211ENST00000559850 PICK1Q9NRD5 415 aa17.96■□□□□ 0.47
RABGGTA-211ENST00000559850 PI4KBQ9UBF8 816 aa17.96■□□□□ 0.47
RABGGTA-211ENST00000559850 PRKAB2O43741 272 aa17.95■□□□□ 0.46
RABGGTA-211ENST00000559850 MBD4O95243 580 aa17.95■□□□□ 0.46
RABGGTA-211ENST00000559850 ALDH1A1P00352 501 aa17.95■□□□□ 0.46
RABGGTA-211ENST00000559850 PTPRAP18433 802 aa17.95■□□□□ 0.46
RABGGTA-211ENST00000559850 SNAPC2Q13487 334 aa17.95■□□□□ 0.46
RABGGTA-211ENST00000559850 IFFO2Q5TF58 517 aa17.95■□□□□ 0.46
RABGGTA-211ENST00000559850 CRACR2BQ8N4Y2 399 aaPredicted RBP17.95■□□□□ 0.46
RABGGTA-211ENST00000559850 PI4K2BQ8TCG2 481 aa17.95■□□□□ 0.46
RABGGTA-211ENST00000559850 GCC1Q96CN9 775 aa17.95■□□□□ 0.46
RABGGTA-211ENST00000559850 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.95■□□□□ 0.46
RABGGTA-211ENST00000559850 DHX36Q9H2U1 1008 aaKnown RBP17.95■□□□□ 0.46
RABGGTA-211ENST00000559850 ZHX2Q9Y6X8 837 aa17.95■□□□□ 0.46
RABGGTA-211ENST00000559850 ZSWIM8A7E2V4 1837 aa17.95■□□□□ 0.46
RABGGTA-211ENST00000559850 BTBD19C9JJ37 291 aa17.94■□□□□ 0.46
RABGGTA-211ENST00000559850 CTNND1O60716 968 aaKnown RBP17.94■□□□□ 0.46
RABGGTA-211ENST00000559850 CETPP11597 493 aa17.94■□□□□ 0.46
RABGGTA-211ENST00000559850 MX1P20591 662 aa17.94■□□□□ 0.46
RABGGTA-211ENST00000559850 JAG1P78504 1218 aa17.94■□□□□ 0.46
RABGGTA-211ENST00000559850 DGKZQ13574 1117 aa17.94■□□□□ 0.46
RABGGTA-211ENST00000559850 OTUD7BQ6GQQ9 843 aa17.94■□□□□ 0.46
RABGGTA-211ENST00000559850 CRNKL1Q9BZJ0 848 aaKnown RBP17.94■□□□□ 0.46
RABGGTA-211ENST00000559850 ZBTB47Q9UFB7 747 aaPredicted RBP17.94■□□□□ 0.46
RABGGTA-211ENST00000559850 SALL3Q9BXA9 1300 aa17.94■□□□□ 0.46
RABGGTA-211ENST00000559850 MYH8P13535 1937 aa17.94■□□□□ 0.46
RABGGTA-211ENST00000559850 GDF11O95390 407 aa17.93■□□□□ 0.46
RABGGTA-211ENST00000559850 CYP2D6P10635 497 aa17.93■□□□□ 0.46
RABGGTA-211ENST00000559850 AAMPQ13685 434 aa17.93■□□□□ 0.46
RABGGTA-211ENST00000559850 TMED8Q6PL24 325 aaPredicted RBP17.93■□□□□ 0.46
RABGGTA-211ENST00000559850 CFHR5Q9BXR6 569 aa17.93■□□□□ 0.46
RABGGTA-211ENST00000559850 TRIM34Q9BYJ4 488 aa17.93■□□□□ 0.46
RABGGTA-211ENST00000559850 LNPKQ9C0E8 428 aa17.93■□□□□ 0.46
RABGGTA-211ENST00000559850 MCOLN1Q9GZU1 580 aa17.93■□□□□ 0.46
RABGGTA-211ENST00000559850 RWDD1Q9H446 243 aaPredicted RBP17.93■□□□□ 0.46
RABGGTA-211ENST00000559850 HERC5Q9UII4 1024 aaKnown RBP17.93■□□□□ 0.46
RABGGTA-211ENST00000559850 KCNH4Q9UQ05 1017 aa17.93■□□□□ 0.46
RABGGTA-211ENST00000559850 TTC41PQ6P2S7 1318 aa17.93■□□□□ 0.46
RABGGTA-211ENST00000559850 TRIM75PA6NK02 468 aa17.92■□□□□ 0.46
RABGGTA-211ENST00000559850 HLA-DOAP06340 250 aa17.92■□□□□ 0.46
RABGGTA-211ENST00000559850 CAP2P40123 477 aa17.92■□□□□ 0.46
RABGGTA-211ENST00000559850 PLCD1P51178 756 aa17.92■□□□□ 0.46
RABGGTA-211ENST00000559850 MOGSQ13724 837 aa17.92■□□□□ 0.46
RABGGTA-211ENST00000559850 TAF1CQ15572 869 aaPredicted RBP17.92■□□□□ 0.46
RABGGTA-211ENST00000559850 CERS3Q8IU89 383 aa17.92■□□□□ 0.46
RABGGTA-211ENST00000559850 KBTBD3Q8NAB2 608 aa17.92■□□□□ 0.46
RABGGTA-211ENST00000559850 PUS7LQ9H0K6 701 aaKnown RBP17.92■□□□□ 0.46
RABGGTA-211ENST00000559850 AFG3L2Q9Y4W6 797 aa17.92■□□□□ 0.46
RABGGTA-211ENST00000559850 UBE3CQ15386 1083 aa17.91■□□□□ 0.46
RABGGTA-211ENST00000559850 GADL1Q6ZQY3 521 aa17.91■□□□□ 0.46
RABGGTA-211ENST00000559850 FOXP4Q8IVH2 680 aaPredicted RBP17.91■□□□□ 0.46
RABGGTA-211ENST00000559850 MCM9Q9NXL9 1143 aa17.91■□□□□ 0.46
RABGGTA-211ENST00000559850 LOC285556D6RIA3 1793 aa17.91■□□□□ 0.46
RABGGTA-211ENST00000559850 SMIM22K7EJ46 135 aa17.9■□□□□ 0.46
RABGGTA-211ENST00000559850 ERC2O15083 957 aa17.9■□□□□ 0.46
RABGGTA-211ENST00000559850 FKTNO75072 461 aa17.9■□□□□ 0.46
RABGGTA-211ENST00000559850 GLRX3O76003 335 aaKnown RBP17.9■□□□□ 0.46
RABGGTA-211ENST00000559850 POLR3DP05423 398 aaPredicted RBP17.9■□□□□ 0.46
RABGGTA-211ENST00000559850 ZSCAN25Q6NSZ9 544 aa17.9■□□□□ 0.46
RABGGTA-211ENST00000559850 METTL16Q86W50 562 aaKnown RBP17.9■□□□□ 0.46
RABGGTA-211ENST00000559850 SMC5Q8IY18 1101 aa17.9■□□□□ 0.46
RABGGTA-211ENST00000559850 ABHD8Q96I13 439 aa17.9■□□□□ 0.46
RABGGTA-211ENST00000559850 DCP1AQ9NPI6 582 aaPredicted RBP17.9■□□□□ 0.46
RABGGTA-211ENST00000559850 CYP2D7A0A087X1C5 515 aa17.89■□□□□ 0.45
RABGGTA-211ENST00000559850 PDHXO00330 501 aa17.89■□□□□ 0.45
RABGGTA-211ENST00000559850 CXCL11O14625 94 aa17.89■□□□□ 0.45
RABGGTA-211ENST00000559850 RNF113AO15541 343 aaKnown RBP17.89■□□□□ 0.45
RABGGTA-211ENST00000559850 ECM2O94769 699 aaPredicted RBP17.89■□□□□ 0.45
RABGGTA-211ENST00000559850 CAP1Q01518 475 aa17.89■□□□□ 0.45
RABGGTA-211ENST00000559850 SPP2Q13103 211 aa17.89■□□□□ 0.45
RABGGTA-211ENST00000559850 GPAT2Q6NUI2 795 aa17.89■□□□□ 0.45
RABGGTA-211ENST00000559850 CD99L2Q8TCZ2 262 aa17.89■□□□□ 0.45
RABGGTA-211ENST00000559850 ZFYVE28Q9HCC9 887 aa17.89■□□□□ 0.45
RABGGTA-211ENST00000559850 SLC4A4Q9Y6R1 1079 aa17.89■□□□□ 0.45
RABGGTA-211ENST00000559850 A0A0G2JLL6 359 aaPredicted RBP17.88■□□□□ 0.45
RABGGTA-211ENST00000559850 M0R2C6 588 aa17.88■□□□□ 0.45
RABGGTA-211ENST00000559850 PDE1AP54750 535 aa17.88■□□□□ 0.45
RABGGTA-211ENST00000559850 PRRT2Q7Z6L0 340 aaPredicted RBP17.88■□□□□ 0.45
RABGGTA-211ENST00000559850 CTU1Q7Z7A3 348 aaKnown RBP17.88■□□□□ 0.45
RABGGTA-211ENST00000559850 ANKRD23Q86SG2 305 aa17.88■□□□□ 0.45
RABGGTA-211ENST00000559850 TTC6Q86TZ1 520 aa17.88■□□□□ 0.45
RABGGTA-211ENST00000559850 SLC44A5Q8NCS7 719 aa17.88■□□□□ 0.45
RABGGTA-211ENST00000559850 OSBP2Q969R2 916 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms