RNA–Protein interactions for RNA: ENST00000559551.5

RABGGTA-209, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 2,060 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-209ENST00000559551 PKP1Q13835 747 aa16.85■□□□□ 0.29
RABGGTA-209ENST00000559551 CIAPIN1Q6FI81 312 aa16.85■□□□□ 0.29
RABGGTA-209ENST00000559551 RNF41Q9H4P4 317 aaPredicted RBP16.85■□□□□ 0.29
RABGGTA-209ENST00000559551 LY9Q9HBG7 655 aa16.85■□□□□ 0.29
RABGGTA-209ENST00000559551 TDRD3Q9H7E2 651 aaKnown RBP16.85■□□□□ 0.29
RABGGTA-209ENST00000559551 TOMM22Q9NS69 142 aa16.85■□□□□ 0.29
RABGGTA-209ENST00000559551 FAM198AQ9UFP1 575 aa16.85■□□□□ 0.29
RABGGTA-209ENST00000559551 HPS5Q9UPZ3 1129 aa16.85■□□□□ 0.29
RABGGTA-209ENST00000559551 ZNF541Q9H0D2 1346 aa16.85■□□□□ 0.29
RABGGTA-209ENST00000559551 SLURP2P0DP57 97 aa16.84■□□□□ 0.29
RABGGTA-209ENST00000559551 PRKCSHP14314 528 aaPredicted RBP16.84■□□□□ 0.29
RABGGTA-209ENST00000559551 PDIA3P30101 505 aaKnown RBP16.84■□□□□ 0.29
RABGGTA-209ENST00000559551 RBM5P52756 815 aaKnown RBP eCLIP16.84■□□□□ 0.29
RABGGTA-209ENST00000559551 SCRN1Q12765 414 aa16.84■□□□□ 0.29
RABGGTA-209ENST00000559551 AGBL3Q8NEM8 1001 aa16.84■□□□□ 0.29
RABGGTA-209ENST00000559551 GTF3C6Q969F1 213 aa16.84■□□□□ 0.29
RABGGTA-209ENST00000559551 PFKFB2O60825 505 aa16.84■□□□□ 0.29
RABGGTA-209ENST00000559551 SEC23AQ15436 765 aa16.84■□□□□ 0.29
RABGGTA-209ENST00000559551 ARHGAP27Q6ZUM4 889 aa16.84■□□□□ 0.29
RABGGTA-209ENST00000559551 RAB11FIP4Q86YS3 637 aa16.84■□□□□ 0.29
RABGGTA-209ENST00000559551 OSBPL5Q9H0X9 879 aaPredicted RBP16.84■□□□□ 0.29
RABGGTA-209ENST00000559551 ANGEL1Q9UNK9 670 aaKnown RBP16.84■□□□□ 0.29
RABGGTA-209ENST00000559551 SPDYE2BA6NHP3 402 aa16.83■□□□□ 0.28
RABGGTA-209ENST00000559551 POLR3DP05423 398 aaPredicted RBP16.83■□□□□ 0.28
RABGGTA-209ENST00000559551 SPDYE6P0CI01 402 aa16.83■□□□□ 0.28
RABGGTA-209ENST00000559551 FGD1P98174 961 aa16.83■□□□□ 0.28
RABGGTA-209ENST00000559551 SH3BP5LQ7L8J4 393 aa16.83■□□□□ 0.28
RABGGTA-209ENST00000559551 ZBED3Q96IU2 234 aaPredicted RBP16.83■□□□□ 0.28
RABGGTA-209ENST00000559551 TMEM87BQ96K49 555 aa16.83■□□□□ 0.28
RABGGTA-209ENST00000559551 IDI2Q9BXS1 227 aa16.83■□□□□ 0.28
RABGGTA-209ENST00000559551 CHMP5Q9NZZ3 219 aa16.83■□□□□ 0.28
RABGGTA-209ENST00000559551 CTDNEP1O95476 244 aa16.82■□□□□ 0.28
RABGGTA-209ENST00000559551 PCP11498 1178 aaKnown RBP16.82■□□□□ 0.28
RABGGTA-209ENST00000559551 FAM47AQ5JRC9 791 aa16.82■□□□□ 0.28
RABGGTA-209ENST00000559551 ZNF274Q96GC6 653 aaPredicted RBP16.82■□□□□ 0.28
RABGGTA-209ENST00000559551 NCOA5Q9HCD5 579 aaKnown RBP16.82■□□□□ 0.28
RABGGTA-209ENST00000559551 ZDHHC9Q9Y397 364 aa16.82■□□□□ 0.28
RABGGTA-209ENST00000559551 GREB1LQ9C091 1923 aaPredicted RBP16.82■□□□□ 0.28
RABGGTA-209ENST00000559551 KLF18A0A0U1RQI7 1052 aa16.82■□□□□ 0.28
RABGGTA-209ENST00000559551 RANBP6O60518 1105 aaKnown RBP16.82■□□□□ 0.28
RABGGTA-209ENST00000559551 NMT2O60551 498 aa16.82■□□□□ 0.28
RABGGTA-209ENST00000559551 EGFRP00533 1210 aa16.82■□□□□ 0.28
RABGGTA-209ENST00000559551 GABPAQ06546 454 aa16.82■□□□□ 0.28
RABGGTA-209ENST00000559551 C16orf86Q6ZW13 317 aa16.82■□□□□ 0.28
RABGGTA-209ENST00000559551 ESR2Q92731 530 aa16.82■□□□□ 0.28
RABGGTA-209ENST00000559551 IFIT3O14879 490 aaKnown RBP16.81■□□□□ 0.28
RABGGTA-209ENST00000559551 RASA1P20936 1047 aa16.81■□□□□ 0.28
RABGGTA-209ENST00000559551 CCT2P78371 535 aaKnown RBP16.81■□□□□ 0.28
RABGGTA-209ENST00000559551 TMEM67Q5HYA8 995 aa16.81■□□□□ 0.28
RABGGTA-209ENST00000559551 SGMS1Q86VZ5 419 aa16.81■□□□□ 0.28
RABGGTA-209ENST00000559551 DDTLA6NHG4 134 aaPredicted RBP16.81■□□□□ 0.28
RABGGTA-209ENST00000559551 LIFRP42702 1097 aa16.81■□□□□ 0.28
RABGGTA-209ENST00000559551 CDK8P49336 464 aa16.81■□□□□ 0.28
RABGGTA-209ENST00000559551 TCP10Q12799 353 aa16.81■□□□□ 0.28
RABGGTA-209ENST00000559551 ENAHQ8N8S7 591 aaPredicted RBP16.81■□□□□ 0.28
RABGGTA-209ENST00000559551 CWC22Q9HCG8 908 aaKnown RBP16.81■□□□□ 0.28
RABGGTA-209ENST00000559551 CIZ1Q9ULV3 898 aaPredicted RBP16.81■□□□□ 0.28
RABGGTA-209ENST00000559551 JAK2O60674 1132 aa16.8■□□□□ 0.28
RABGGTA-209ENST00000559551 RXRAP19793 462 aa16.8■□□□□ 0.28
RABGGTA-209ENST00000559551 PDE4BQ07343 736 aa16.8■□□□□ 0.28
RABGGTA-209ENST00000559551 TNIP1Q15025 636 aa16.8■□□□□ 0.28
RABGGTA-209ENST00000559551 APOA5Q6Q788 366 aa16.8■□□□□ 0.28
RABGGTA-209ENST00000559551 MTMR14Q8NCE2 650 aa16.8■□□□□ 0.28
RABGGTA-209ENST00000559551 MYL10Q9BUA6 226 aa16.8■□□□□ 0.28
RABGGTA-209ENST00000559551 IL17RBQ9NRM6 502 aa16.8■□□□□ 0.28
RABGGTA-209ENST00000559551 TNKSO95271 1327 aa16.8■□□□□ 0.28
RABGGTA-209ENST00000559551 TCHHQ07283 1943 aa16.8■□□□□ 0.28
RABGGTA-209ENST00000559551 LMNB1P20700 586 aa16.79■□□□□ 0.28
RABGGTA-209ENST00000559551 GMPSP49915 693 aaPredicted RBP16.79■□□□□ 0.28
RABGGTA-209ENST00000559551 MTA3Q9BTC8 594 aa16.79■□□□□ 0.28
RABGGTA-209ENST00000559551 DNAJC18Q9H819 358 aa16.79■□□□□ 0.28
RABGGTA-209ENST00000559551 CLRN2A0PK11 232 aa16.79■□□□□ 0.28
RABGGTA-209ENST00000559551 NPM3O75607 178 aaKnown RBP16.79■□□□□ 0.28
RABGGTA-209ENST00000559551 SLC3A2P08195 630 aaKnown RBP16.79■□□□□ 0.28
RABGGTA-209ENST00000559551 GJB2P29033 226 aa16.79■□□□□ 0.28
RABGGTA-209ENST00000559551 ZNF280AP59817 542 aaPredicted RBP16.79■□□□□ 0.28
RABGGTA-209ENST00000559551 GSE1Q14687 1217 aa16.79■□□□□ 0.28
RABGGTA-209ENST00000559551 RAB3GAP1Q15042 981 aa16.79■□□□□ 0.28
RABGGTA-209ENST00000559551 DLGAP5Q15398 846 aa16.79■□□□□ 0.28
RABGGTA-209ENST00000559551 NBPF9Q3BBW0 867 aa16.79■□□□□ 0.28
RABGGTA-209ENST00000559551 RCSD1Q6JBY9 416 aa16.79■□□□□ 0.28
RABGGTA-209ENST00000559551 ZSCAN10Q96SZ4 725 aaPredicted RBP16.79■□□□□ 0.28
RABGGTA-209ENST00000559551 FAM217BQ9NTX9 383 aaPredicted RBP16.79■□□□□ 0.28
RABGGTA-209ENST00000559551 ZNF70Q9UC06 446 aaPredicted RBP16.79■□□□□ 0.28
RABGGTA-209ENST00000559551 HDAC9Q9UKV0 1011 aa16.79■□□□□ 0.28
RABGGTA-209ENST00000559551 CNTNAP1P78357 1384 aa16.79■□□□□ 0.28
RABGGTA-209ENST00000559551 POLR2AP24928 1970 aaKnown RBP16.78■□□□□ 0.28
RABGGTA-209ENST00000559551 GOLGA8BA8MQT2 603 aa16.78■□□□□ 0.28
RABGGTA-209ENST00000559551 TFAP4Q01664 338 aa16.78■□□□□ 0.28
RABGGTA-209ENST00000559551 SPDYE2Q495Y8 402 aa16.78■□□□□ 0.28
RABGGTA-209ENST00000559551 OGFOD1Q8N543 542 aa16.78■□□□□ 0.28
RABGGTA-209ENST00000559551 NSUN7Q8NE18 718 aaKnown RBP16.78■□□□□ 0.28
RABGGTA-209ENST00000559551 NAP1L2Q9ULW6 460 aaPredicted RBP16.78■□□□□ 0.28
RABGGTA-209ENST00000559551 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.78■□□□□ 0.28
RABGGTA-209ENST00000559551 GJA3Q9Y6H8 435 aa16.78■□□□□ 0.28
RABGGTA-209ENST00000559551 MYH6P13533 1939 aa16.78■□□□□ 0.28
RABGGTA-209ENST00000559551 WNT10BO00744 389 aa16.77■□□□□ 0.28
RABGGTA-209ENST00000559551 CDC27P30260 824 aa16.77■□□□□ 0.28
RABGGTA-209ENST00000559551 EIF6P56537 245 aaKnown RBP16.77■□□□□ 0.28
RABGGTA-209ENST00000559551 WTAPQ15007 396 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms