RNA–Protein interactions for RNA: ENST00000559433.5

LRRC28-214, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-214ENST00000559433 TBC1D12O60347 775 aa15.29■□□□□ 0.04
LRRC28-214ENST00000559433 TAF1CQ15572 869 aaPredicted RBP15.29■□□□□ 0.04
LRRC28-214ENST00000559433 CERS3Q8IU89 383 aa15.29■□□□□ 0.04
LRRC28-214ENST00000559433 ERO1AQ96HE7 468 aa15.29■□□□□ 0.04
LRRC28-214ENST00000559433 CRBNQ96SW2 442 aa15.29■□□□□ 0.04
LRRC28-214ENST00000559433 DHX36Q9H2U1 1008 aaKnown RBP15.29■□□□□ 0.04
LRRC28-214ENST00000559433 DCTPP1Q9H773 170 aa15.29■□□□□ 0.04
LRRC28-214ENST00000559433 BTBD19C9JJ37 291 aa15.28■□□□□ 0.04
LRRC28-214ENST00000559433 CTNND1O60716 968 aaKnown RBP15.28■□□□□ 0.04
LRRC28-214ENST00000559433 PDE6AP16499 860 aa15.28■□□□□ 0.04
LRRC28-214ENST00000559433 PTPRAP18433 802 aa15.28■□□□□ 0.04
LRRC28-214ENST00000559433 ATP5JP18859 108 aa15.28■□□□□ 0.04
LRRC28-214ENST00000559433 SP3Q02447 781 aa15.28■□□□□ 0.04
LRRC28-214ENST00000559433 SLC9C2Q5TAH2 1124 aa15.28■□□□□ 0.04
LRRC28-214ENST00000559433 EDC3Q96F86 508 aaKnown RBP15.28■□□□□ 0.04
LRRC28-214ENST00000559433 BOLA2Q9H3K6 86 aa15.28■□□□□ 0.04
LRRC28-214ENST00000559433 PAG1Q9NWQ8 432 aa15.28■□□□□ 0.04
LRRC28-214ENST00000559433 PI4KBQ9UBF8 816 aa15.28■□□□□ 0.04
LRRC28-214ENST00000559433 SAP30BPQ9UHR5 308 aaKnown RBP15.28■□□□□ 0.04
LRRC28-214ENST00000559433 KCNH4Q9UQ05 1017 aa15.28■□□□□ 0.04
LRRC28-214ENST00000559433 PCDHB15Q9Y5E8 787 aa15.28■□□□□ 0.04
LRRC28-214ENST00000559433 DDX60LQ5H9U9 1706 aaKnown RBP15.27■□□□□ 0.04
LRRC28-214ENST00000559433 USP5P45974 858 aa15.27■□□□□ 0.04
LRRC28-214ENST00000559433 TRIM34Q9BYJ4 488 aa15.27■□□□□ 0.04
LRRC28-214ENST00000559433 ZCCHC17Q9NP64 241 aaKnown RBP15.27■□□□□ 0.04
LRRC28-214ENST00000559433 HERC5Q9UII4 1024 aaKnown RBP15.27■□□□□ 0.04
LRRC28-214ENST00000559433 PALD1Q9ULE6 856 aa15.27■□□□□ 0.04
LRRC28-214ENST00000559433 TRIM17Q9Y577 477 aa15.27■□□□□ 0.04
LRRC28-214ENST00000559433 ZHX2Q9Y6X8 837 aa15.27■□□□□ 0.04
LRRC28-214ENST00000559433 ZNF532Q9HCE3 1301 aa15.26■□□□□ 0.03
LRRC28-214ENST00000559433 MAGEB6P1A0A0J9YX57 407 aa15.26■□□□□ 0.03
LRRC28-214ENST00000559433 KIF22Q14807 665 aa15.26■□□□□ 0.03
LRRC28-214ENST00000559433 SLC4A8Q2Y0W8 1093 aa15.26■□□□□ 0.03
LRRC28-214ENST00000559433 FBXO46Q6PJ61 603 aaPredicted RBP15.26■□□□□ 0.03
LRRC28-214ENST00000559433 CRACR2BQ8N4Y2 399 aaPredicted RBP15.26■□□□□ 0.03
LRRC28-214ENST00000559433 HAUS7Q99871 368 aa15.26■□□□□ 0.03
LRRC28-214ENST00000559433 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.26■□□□□ 0.03
LRRC28-214ENST00000559433 CXCL11O14625 94 aa15.25■□□□□ 0.03
LRRC28-214ENST00000559433 HLA-DOAP06340 250 aa15.25■□□□□ 0.03
LRRC28-214ENST00000559433 ANKRD23Q86SG2 305 aa15.25■□□□□ 0.03
LRRC28-214ENST00000559433 GPATCH3Q96I76 525 aa15.25■□□□□ 0.03
LRRC28-214ENST00000559433 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.25■□□□□ 0.03
LRRC28-214ENST00000559433 EFCC1Q9HA90 598 aa15.25■□□□□ 0.03
LRRC28-214ENST00000559433 HPS5Q9UPZ3 1129 aa15.25■□□□□ 0.03
LRRC28-214ENST00000559433 AFG3L2Q9Y4W6 797 aa15.25■□□□□ 0.03
LRRC28-214ENST00000559433 LOC285556D6RIA3 1793 aa15.24■□□□□ 0.03
LRRC28-214ENST00000559433 TCRBV5S4A2TA0A5A2 114 aa15.24■□□□□ 0.03
LRRC28-214ENST00000559433 TRIM75PA6NK02 468 aa15.24■□□□□ 0.03
LRRC28-214ENST00000559433 PDHXO00330 501 aa15.24■□□□□ 0.03
LRRC28-214ENST00000559433 CAP2P40123 477 aa15.24■□□□□ 0.03
LRRC28-214ENST00000559433 MLLT1Q03111 559 aaPredicted RBP15.24■□□□□ 0.03
LRRC28-214ENST00000559433 MOGSQ13724 837 aa15.24■□□□□ 0.03
LRRC28-214ENST00000559433 FASTKD5Q7L8L6 764 aaKnown RBP15.24■□□□□ 0.03
LRRC28-214ENST00000559433 CCDC84Q86UT8 332 aaPredicted RBP15.24■□□□□ 0.03
LRRC28-214ENST00000559433 CD99L2Q8TCZ2 262 aa15.24■□□□□ 0.03
LRRC28-214ENST00000559433 RIOK1Q9BRS2 568 aaKnown RBP15.24■□□□□ 0.03
LRRC28-214ENST00000559433 ECHDC1Q9NTX5 307 aa15.24■□□□□ 0.03
LRRC28-214ENST00000559433 ZSWIM8A7E2V4 1837 aa15.24■□□□□ 0.03
LRRC28-214ENST00000559433 MYH8P13535 1937 aa15.23■□□□□ 0.03
LRRC28-214ENST00000559433 A0A0G2JLL6 359 aaPredicted RBP15.23■□□□□ 0.03
LRRC28-214ENST00000559433 RRP1BQ14684 758 aaKnown RBP15.23■□□□□ 0.03
LRRC28-214ENST00000559433 GADL1Q6ZQY3 521 aa15.23■□□□□ 0.03
LRRC28-214ENST00000559433 PRRT2Q7Z6L0 340 aaPredicted RBP15.23■□□□□ 0.03
LRRC28-214ENST00000559433 FOXP4Q8IVH2 680 aaPredicted RBP15.23■□□□□ 0.03
LRRC28-214ENST00000559433 CRNKL1Q9BZJ0 848 aaKnown RBP15.23■□□□□ 0.03
LRRC28-214ENST00000559433 DNAJC18Q9H819 358 aa15.23■□□□□ 0.03
LRRC28-214ENST00000559433 BAZ2AQ9UIF9 1905 aaKnown RBP15.23■□□□□ 0.03
LRRC28-214ENST00000559433 TLR2O60603 784 aa15.22■□□□□ 0.03
LRRC28-214ENST00000559433 ADD2P35612 726 aa15.22■□□□□ 0.03
LRRC28-214ENST00000559433 TSHZ3Q63HK5 1081 aa15.22■□□□□ 0.03
LRRC28-214ENST00000559433 OTOP1Q7RTM1 612 aa15.22■□□□□ 0.03
LRRC28-214ENST00000559433 METTL16Q86W50 562 aaKnown RBP15.22■□□□□ 0.03
LRRC28-214ENST00000559433 LCORLQ8N3X6 602 aa15.22■□□□□ 0.03
LRRC28-214ENST00000559433 USP17L5A8MUK1 530 aa15.21■□□□□ 0.03
LRRC28-214ENST00000559433 SLFNL1Q499Z3 407 aa15.21■□□□□ 0.03
LRRC28-214ENST00000559433 ZSCAN25Q6NSZ9 544 aa15.21■□□□□ 0.03
LRRC28-214ENST00000559433 GPAT2Q6NUI2 795 aa15.21■□□□□ 0.03
LRRC28-214ENST00000559433 PARK7Q99497 189 aaKnown RBP15.21■□□□□ 0.03
LRRC28-214ENST00000559433 TBC1D2Q9BYX2 928 aa15.21■□□□□ 0.03
LRRC28-214ENST00000559433 MBD4O95243 580 aa15.2■□□□□ 0.02
LRRC28-214ENST00000559433 GDF11O95390 407 aa15.2■□□□□ 0.02
LRRC28-214ENST00000559433 ASNSP08243 561 aa15.2■□□□□ 0.02
LRRC28-214ENST00000559433 SOX10P56693 466 aa15.2■□□□□ 0.02
LRRC28-214ENST00000559433 SPP2Q13103 211 aa15.2■□□□□ 0.02
LRRC28-214ENST00000559433 TTC6Q86TZ1 520 aa15.2■□□□□ 0.02
LRRC28-214ENST00000559433 ZNF280CQ8ND82 737 aa15.2■□□□□ 0.02
LRRC28-214ENST00000559433 EHD4Q9H223 541 aa15.2■□□□□ 0.02
LRRC28-214ENST00000559433 ARMT1Q9H993 441 aa15.2■□□□□ 0.02
LRRC28-214ENST00000559433 AS3MTQ9HBK9 375 aa15.2■□□□□ 0.02
LRRC28-214ENST00000559433 ZBTB47Q9UFB7 747 aaPredicted RBP15.2■□□□□ 0.02
LRRC28-214ENST00000559433 CPA4Q9UI42 421 aa15.2■□□□□ 0.02
LRRC28-214ENST00000559433 SERPINB13Q9UIV8 391 aa15.2■□□□□ 0.02
LRRC28-214ENST00000559433 PTPN22Q9Y2R2 807 aa15.2■□□□□ 0.02
LRRC28-214ENST00000559433 MGAMO43451 1857 aa15.2■□□□□ 0.02
LRRC28-214ENST00000559433 ADGRA2Q96PE1 1338 aa15.19■□□□□ 0.02
LRRC28-214ENST00000559433 CHGBP05060 677 aa15.19■□□□□ 0.02
LRRC28-214ENST00000559433 POLR3DP05423 398 aaPredicted RBP15.19■□□□□ 0.02
LRRC28-214ENST00000559433 CYP2C8P10632 490 aa15.19■□□□□ 0.02
LRRC28-214ENST00000559433 HOXD10P28358 340 aa15.19■□□□□ 0.02
LRRC28-214ENST00000559433 RGS19P49795 217 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms