RNA–Protein interactions for RNA: ENST00000559401.1

SNX1-207, Transcript of sorting nexin 1, humanhuman

TSL 2

Gene SNX1, Length 408 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-207ENST00000559401 DHX36Q9H2U1 1008 aaKnown RBP9.93□□□□□ -0.82
SNX1-207ENST00000559401 DCTPP1Q9H773 170 aa9.93□□□□□ -0.82
SNX1-207ENST00000559401 ZFYVE28Q9HCC9 887 aa9.93□□□□□ -0.82
SNX1-207ENST00000559401 PALD1Q9ULE6 856 aa9.93□□□□□ -0.82
SNX1-207ENST00000559401 PCDHB15Q9Y5E8 787 aa9.93□□□□□ -0.82
SNX1-207ENST00000559401 ZHX2Q9Y6X8 837 aa9.93□□□□□ -0.82
SNX1-207ENST00000559401 PTPRFP10586 1907 aa9.92□□□□□ -0.82
SNX1-207ENST00000559401 ZNF532Q9HCE3 1301 aa9.92□□□□□ -0.82
SNX1-207ENST00000559401 PHIPQ8WWQ0 1821 aa9.92□□□□□ -0.82
SNX1-207ENST00000559401 MAGEB6P1A0A0J9YX57 407 aa9.92□□□□□ -0.82
SNX1-207ENST00000559401 TRIM75PA6NK02 468 aa9.92□□□□□ -0.82
SNX1-207ENST00000559401 PHF20L1A8MW92 1017 aa9.92□□□□□ -0.82
SNX1-207ENST00000559401 BTBD19C9JJ37 291 aa9.92□□□□□ -0.82
SNX1-207ENST00000559401 PTPRAP18433 802 aa9.92□□□□□ -0.82
SNX1-207ENST00000559401 NOM1Q5C9Z4 860 aaKnown RBP9.92□□□□□ -0.82
SNX1-207ENST00000559401 GADL1Q6ZQY3 521 aa9.92□□□□□ -0.82
SNX1-207ENST00000559401 CCDC84Q86UT8 332 aaPredicted RBP9.92□□□□□ -0.82
SNX1-207ENST00000559401 HAUS7Q99871 368 aa9.92□□□□□ -0.82
SNX1-207ENST00000559401 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.92□□□□□ -0.823e-6■□□□□ 10
SNX1-207ENST00000559401 ECHDC1Q9NTX5 307 aa9.92□□□□□ -0.82
SNX1-207ENST00000559401 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.92□□□□□ -0.82
SNX1-207ENST00000559401 PI4KBQ9UBF8 816 aa9.92□□□□□ -0.82
SNX1-207ENST00000559401 HERC5Q9UII4 1024 aaKnown RBP9.92□□□□□ -0.82
SNX1-207ENST00000559401 TBC1D12O60347 775 aa9.91□□□□□ -0.82
SNX1-207ENST00000559401 ECM2O94769 699 aaPredicted RBP9.91□□□□□ -0.82
SNX1-207ENST00000559401 TSHZ3Q63HK5 1081 aa9.91□□□□□ -0.82
SNX1-207ENST00000559401 TMED8Q6PL24 325 aaPredicted RBP9.91□□□□□ -0.82
SNX1-207ENST00000559401 CD99L2Q8TCZ2 262 aa9.91□□□□□ -0.82
SNX1-207ENST00000559401 ERO1AQ96HE7 468 aa9.91□□□□□ -0.82
SNX1-207ENST00000559401 CRNKL1Q9BZJ0 848 aaKnown RBP9.91□□□□□ -0.82
SNX1-207ENST00000559401 KCNH4Q9UQ05 1017 aa9.91□□□□□ -0.82
SNX1-207ENST00000559401 TRIM17Q9Y577 477 aa9.91□□□□□ -0.82
SNX1-207ENST00000559401 DDX60LQ5H9U9 1706 aaKnown RBP9.9□□□□□ -0.82
SNX1-207ENST00000559401 MYH8P13535 1937 aa9.9□□□□□ -0.82
SNX1-207ENST00000559401 PDHXO00330 501 aa9.9□□□□□ -0.82
SNX1-207ENST00000559401 CXCL11O14625 94 aa9.9□□□□□ -0.82
SNX1-207ENST00000559401 GDF11O95390 407 aa9.9□□□□□ -0.82
SNX1-207ENST00000559401 POLR3DP05423 398 aaPredicted RBP9.9□□□□□ -0.82
SNX1-207ENST00000559401 CAP2P40123 477 aa9.9□□□□□ -0.82
SNX1-207ENST00000559401 SP3Q02447 781 aa9.9□□□□□ -0.82
SNX1-207ENST00000559401 MAP3K10Q02779 954 aa9.9□□□□□ -0.82
SNX1-207ENST00000559401 ZSCAN25Q6NSZ9 544 aa9.9□□□□□ -0.82
SNX1-207ENST00000559401 ANKRD23Q86SG2 305 aa9.9□□□□□ -0.82
SNX1-207ENST00000559401 TTC6Q86TZ1 520 aa9.9□□□□□ -0.82
SNX1-207ENST00000559401 LCORLQ8N3X6 602 aa9.9□□□□□ -0.82
SNX1-207ENST00000559401 ZCCHC17Q9NP64 241 aaKnown RBP9.9□□□□□ -0.82
SNX1-207ENST00000559401 ZSWIM8A7E2V4 1837 aa9.89□□□□□ -0.83
SNX1-207ENST00000559401 MBD4O95243 580 aa9.89□□□□□ -0.83
SNX1-207ENST00000559401 ADD2P35612 726 aa9.89□□□□□ -0.83
SNX1-207ENST00000559401 KIF22Q14807 665 aa9.89□□□□□ -0.83
SNX1-207ENST00000559401 PKN2Q16513 984 aaKnown RBP9.89□□□□□ -0.83
SNX1-207ENST00000559401 SLFNL1Q499Z3 407 aa9.89□□□□□ -0.83
SNX1-207ENST00000559401 ANKRD45Q5TZF3 282 aa9.89□□□□□ -0.83
SNX1-207ENST00000559401 FASTKD5Q7L8L6 764 aaKnown RBP9.89□□□□□ -0.83
SNX1-207ENST00000559401 FOXP4Q8IVH2 680 aaPredicted RBP9.89□□□□□ -0.83
SNX1-207ENST00000559401 SDR42E1Q8WUS8 393 aa9.89□□□□□ -0.83
SNX1-207ENST00000559401 PARK7Q99497 189 aaKnown RBP9.89□□□□□ -0.83
SNX1-207ENST00000559401 RIOK1Q9BRS2 568 aaKnown RBP9.89□□□□□ -0.83
SNX1-207ENST00000559401 ARMT1Q9H993 441 aa9.89□□□□□ -0.83
SNX1-207ENST00000559401 AS3MTQ9HBK9 375 aa9.89□□□□□ -0.83
SNX1-207ENST00000559401 MCM9Q9NXL9 1143 aa9.89□□□□□ -0.83
SNX1-207ENST00000559401 AFG3L2Q9Y4W6 797 aa9.89□□□□□ -0.83
SNX1-207ENST00000559401 BAZ2AQ9UIF9 1905 aaKnown RBP9.89□□□□□ -0.83
SNX1-207ENST00000559401 LOC285556D6RIA3 1793 aa9.88□□□□□ -0.83
SNX1-207ENST00000559401 A0A0G2JLL6 359 aaPredicted RBP9.88□□□□□ -0.83
SNX1-207ENST00000559401 TCRBV5S4A2TA0A5A2 114 aa9.88□□□□□ -0.83
SNX1-207ENST00000559401 USP17L5A8MUK1 530 aa9.88□□□□□ -0.83
SNX1-207ENST00000559401 ERC2O15083 957 aa9.88□□□□□ -0.83
SNX1-207ENST00000559401 TLR2O60603 784 aa9.88□□□□□ -0.83
SNX1-207ENST00000559401 ASNSP08243 561 aa9.88□□□□□ -0.83
SNX1-207ENST00000559401 SPP2Q13103 211 aa9.88□□□□□ -0.83
SNX1-207ENST00000559401 RRP1BQ14684 758 aaKnown RBP9.88□□□□□ -0.83
SNX1-207ENST00000559401 ARHGEF6Q15052 776 aa9.88□□□□□ -0.83
SNX1-207ENST00000559401 FBXO46Q6PJ61 603 aaPredicted RBP9.88□□□□□ -0.83
SNX1-207ENST00000559401 OTOP1Q7RTM1 612 aa9.88□□□□□ -0.83
SNX1-207ENST00000559401 PRRT2Q7Z6L0 340 aaPredicted RBP9.88□□□□□ -0.83
SNX1-207ENST00000559401 ZNF280CQ8ND82 737 aa9.88□□□□□ -0.83
SNX1-207ENST00000559401 DDRGK1Q96HY6 314 aa9.88□□□□□ -0.83
SNX1-207ENST00000559401 DNAJC18Q9H819 358 aa9.88□□□□□ -0.83
SNX1-207ENST00000559401 EFCC1Q9HA90 598 aa9.88□□□□□ -0.83
SNX1-207ENST00000559401 CPA4Q9UI42 421 aa9.88□□□□□ -0.83
SNX1-207ENST00000559401 SERPINB13Q9UIV8 391 aa9.88□□□□□ -0.83
SNX1-207ENST00000559401 HPS5Q9UPZ3 1129 aa9.88□□□□□ -0.83
SNX1-207ENST00000559401 SUPT16HQ9Y5B9 1047 aaKnown RBP9.88□□□□□ -0.83
SNX1-207ENST00000559401 TTC41PQ6P2S7 1318 aa9.87□□□□□ -0.83
SNX1-207ENST00000559401 CHGBP05060 677 aa9.87□□□□□ -0.83
SNX1-207ENST00000559401 CYP2C8P10632 490 aa9.87□□□□□ -0.83
SNX1-207ENST00000559401 MX1P20591 662 aa9.87□□□□□ -0.83
SNX1-207ENST00000559401 HMGCS2P54868 508 aa9.87□□□□□ -0.83
SNX1-207ENST00000559401 AAMPQ13685 434 aa9.87□□□□□ -0.83
SNX1-207ENST00000559401 MOGSQ13724 837 aa9.87□□□□□ -0.83
SNX1-207ENST00000559401 AMOTL1Q8IY63 956 aa9.87□□□□□ -0.83
SNX1-207ENST00000559401 KBTBD3Q8NAB2 608 aa9.87□□□□□ -0.83
SNX1-207ENST00000559401 EXOC6Q8TAG9 804 aa9.87□□□□□ -0.83
SNX1-207ENST00000559401 OTUD7AQ8TE49 926 aaPredicted RBP9.87□□□□□ -0.83
SNX1-207ENST00000559401 SMCR8Q8TEV9 937 aaPredicted RBP9.87□□□□□ -0.83
SNX1-207ENST00000559401 GCC1Q96CN9 775 aa9.87□□□□□ -0.83
SNX1-207ENST00000559401 FEZ1Q99689 392 aa9.87□□□□□ -0.83
SNX1-207ENST00000559401 TBC1D2Q9BYX2 928 aa9.87□□□□□ -0.83
SNX1-207ENST00000559401 ZBTB21Q9ULJ3 1066 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms