RNA–Protein interactions for RNA: ENST00000559347.1

SPG11-216, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 716 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-216ENST00000559347 DCTPP1Q9H773 170 aa13.32□□□□□ -0.28
SPG11-216ENST00000559347 KCNH4Q9UQ05 1017 aa13.32□□□□□ -0.28
SPG11-216ENST00000559347 PCDHB15Q9Y5E8 787 aa13.32□□□□□ -0.28
SPG11-216ENST00000559347 MGAMO43451 1857 aa13.31□□□□□ -0.28
SPG11-216ENST00000559347 GOLIM4O00461 696 aa13.31□□□□□ -0.28
SPG11-216ENST00000559347 TBC1D12O60347 775 aa13.31□□□□□ -0.28
SPG11-216ENST00000559347 FKTNO75072 461 aa13.31□□□□□ -0.28
SPG11-216ENST00000559347 CETPP11597 493 aa13.31□□□□□ -0.28
SPG11-216ENST00000559347 ATP5JP18859 108 aa13.31□□□□□ -0.28
SPG11-216ENST00000559347 CERS3Q8IU89 383 aa13.31□□□□□ -0.28
SPG11-216ENST00000559347 MAPKAPK5Q8IW41 473 aa13.31□□□□□ -0.28
SPG11-216ENST00000559347 FAM43AQ8N2R8 423 aa13.31□□□□□ -0.28
SPG11-216ENST00000559347 MIGA1Q8NAN2 632 aa13.31□□□□□ -0.28
SPG11-216ENST00000559347 TGFBRAP1Q8WUH2 860 aa13.31□□□□□ -0.28
SPG11-216ENST00000559347 EDC3Q96F86 508 aaKnown RBP13.31□□□□□ -0.28
SPG11-216ENST00000559347 BTBD19C9JJ37 291 aa13.3□□□□□ -0.28
SPG11-216ENST00000559347 PDE6AP16499 860 aa13.3□□□□□ -0.28
SPG11-216ENST00000559347 TAF1CQ15572 869 aaPredicted RBP13.3□□□□□ -0.28
SPG11-216ENST00000559347 RIOK1Q9BRS2 568 aaKnown RBP13.3□□□□□ -0.28
SPG11-216ENST00000559347 DHX36Q9H2U1 1008 aaKnown RBP13.3□□□□□ -0.28
SPG11-216ENST00000559347 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.3□□□□□ -0.28
SPG11-216ENST00000559347 ZCCHC17Q9NP64 241 aaKnown RBP13.3□□□□□ -0.28
SPG11-216ENST00000559347 PAG1Q9NWQ8 432 aa13.3□□□□□ -0.28
SPG11-216ENST00000559347 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.3□□□□□ -0.28
SPG11-216ENST00000559347 HERC5Q9UII4 1024 aaKnown RBP13.3□□□□□ -0.28
SPG11-216ENST00000559347 RBBP6Q7Z6E9 1792 aaKnown RBP13.3□□□□□ -0.28
SPG11-216ENST00000559347 TCRBV5S4A2TA0A5A2 114 aa13.29□□□□□ -0.28
SPG11-216ENST00000559347 CTNND1O60716 968 aaKnown RBP13.29□□□□□ -0.28
SPG11-216ENST00000559347 PTPRAP18433 802 aa13.29□□□□□ -0.28
SPG11-216ENST00000559347 MOGSQ13724 837 aa13.29□□□□□ -0.28
SPG11-216ENST00000559347 SLC9C2Q5TAH2 1124 aa13.29□□□□□ -0.28
SPG11-216ENST00000559347 HAUS7Q99871 368 aa13.29□□□□□ -0.28
SPG11-216ENST00000559347 BOLA2Q9H3K6 86 aa13.29□□□□□ -0.28
SPG11-216ENST00000559347 DNAJC18Q9H819 358 aa13.29□□□□□ -0.28
SPG11-216ENST00000559347 PICK1Q9NRD5 415 aa13.29□□□□□ -0.28
SPG11-216ENST00000559347 ZNF532Q9HCE3 1301 aa13.29□□□□□ -0.28
SPG11-216ENST00000559347 TNRC18O15417 2968 aaPredicted RBP13.29□□□□□ -0.28
SPG11-216ENST00000559347 METTL16Q86W50 562 aaKnown RBP13.28□□□□□ -0.28
SPG11-216ENST00000559347 PI4KBQ9UBF8 816 aa13.28□□□□□ -0.28
SPG11-216ENST00000559347 PALD1Q9ULE6 856 aa13.28□□□□□ -0.28
SPG11-216ENST00000559347 BRCA2P51587 3418 aa13.27□□□□□ -0.28
SPG11-216ENST00000559347 A0A0G2JLL6 359 aaPredicted RBP13.27□□□□□ -0.29
SPG11-216ENST00000559347 MAGEB6P1A0A0J9YX57 407 aa13.27□□□□□ -0.29
SPG11-216ENST00000559347 CXCL11O14625 94 aa13.27□□□□□ -0.29
SPG11-216ENST00000559347 RRP1BQ14684 758 aaKnown RBP13.27□□□□□ -0.29
SPG11-216ENST00000559347 PRRT2Q7Z6L0 340 aaPredicted RBP13.27□□□□□ -0.29
SPG11-216ENST00000559347 ANKRD23Q86SG2 305 aa13.27□□□□□ -0.29
SPG11-216ENST00000559347 CCDC84Q86UT8 332 aaPredicted RBP13.27□□□□□ -0.29
SPG11-216ENST00000559347 ZFYVE28Q9HCC9 887 aa13.27□□□□□ -0.29
SPG11-216ENST00000559347 ECHDC1Q9NTX5 307 aa13.27□□□□□ -0.29
SPG11-216ENST00000559347 SAP30BPQ9UHR5 308 aaKnown RBP13.27□□□□□ -0.29
SPG11-216ENST00000559347 AFG3L2Q9Y4W6 797 aa13.27□□□□□ -0.29
SPG11-216ENST00000559347 ZHX2Q9Y6X8 837 aa13.27□□□□□ -0.29
SPG11-216ENST00000559347 ADGRA2Q96PE1 1338 aa13.27□□□□□ -0.29
SPG11-216ENST00000559347 HLA-DOAP06340 250 aa13.26□□□□□ -0.29
SPG11-216ENST00000559347 ADD2P35612 726 aa13.26□□□□□ -0.29
SPG11-216ENST00000559347 CAP2P40123 477 aa13.26□□□□□ -0.29
SPG11-216ENST00000559347 USP5P45974 858 aa13.26□□□□□ -0.29
SPG11-216ENST00000559347 SLC4A8Q2Y0W8 1093 aa13.26□□□□□ -0.29
SPG11-216ENST00000559347 TSHZ3Q63HK5 1081 aa13.26□□□□□ -0.29
SPG11-216ENST00000559347 CD99L2Q8TCZ2 262 aa13.26□□□□□ -0.29
SPG11-216ENST00000559347 GPATCH3Q96I76 525 aa13.26□□□□□ -0.29
SPG11-216ENST00000559347 TRIM75PA6NK02 468 aa13.25□□□□□ -0.29
SPG11-216ENST00000559347 PDHXO00330 501 aa13.25□□□□□ -0.29
SPG11-216ENST00000559347 TLR2O60603 784 aa13.25□□□□□ -0.29
SPG11-216ENST00000559347 CAP1Q01518 475 aa13.25□□□□□ -0.29
SPG11-216ENST00000559347 SP3Q02447 781 aa13.25□□□□□ -0.29
SPG11-216ENST00000559347 PKN2Q16513 984 aaKnown RBP13.25□□□□□ -0.29
SPG11-216ENST00000559347 GPAT2Q6NUI2 795 aa13.25□□□□□ -0.29
SPG11-216ENST00000559347 OTOP1Q7RTM1 612 aa13.25□□□□□ -0.29
SPG11-216ENST00000559347 LCORLQ8N3X6 602 aa13.25□□□□□ -0.29
SPG11-216ENST00000559347 CRACR2BQ8N4Y2 399 aaPredicted RBP13.25□□□□□ -0.29
SPG11-216ENST00000559347 ERO1AQ96HE7 468 aa13.25□□□□□ -0.29
SPG11-216ENST00000559347 CRNKL1Q9BZJ0 848 aaKnown RBP13.25□□□□□ -0.29
SPG11-216ENST00000559347 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.25□□□□□ -0.296e-6■■■□□ 19.2
SPG11-216ENST00000559347 EHD4Q9H223 541 aa13.25□□□□□ -0.29
SPG11-216ENST00000559347 TTC41PQ6P2S7 1318 aa13.24□□□□□ -0.29
SPG11-216ENST00000559347 SALL3Q9BXA9 1300 aa13.24□□□□□ -0.29
SPG11-216ENST00000559347 GREB1LQ9C091 1923 aaPredicted RBP13.24□□□□□ -0.29
SPG11-216ENST00000559347 CCDC85CA6NKD9 419 aa13.24□□□□□ -0.29
SPG11-216ENST00000559347 CHGBP05060 677 aa13.24□□□□□ -0.29
SPG11-216ENST00000559347 SHROOM1Q2M3G4 852 aaPredicted RBP13.24□□□□□ -0.29
SPG11-216ENST00000559347 SLFNL1Q499Z3 407 aa13.24□□□□□ -0.29
SPG11-216ENST00000559347 FBXO46Q6PJ61 603 aaPredicted RBP13.24□□□□□ -0.29
SPG11-216ENST00000559347 TRIM34Q9BYJ4 488 aa13.24□□□□□ -0.29
SPG11-216ENST00000559347 TBC1D2Q9BYX2 928 aa13.24□□□□□ -0.29
SPG11-216ENST00000559347 ARMT1Q9H993 441 aa13.24□□□□□ -0.29
SPG11-216ENST00000559347 HPS5Q9UPZ3 1129 aa13.24□□□□□ -0.29
SPG11-216ENST00000559347 TRIM17Q9Y577 477 aa13.24□□□□□ -0.29
SPG11-216ENST00000559347 MBD4O95243 580 aa13.23□□□□□ -0.29
SPG11-216ENST00000559347 GDF11O95390 407 aa13.23□□□□□ -0.29
SPG11-216ENST00000559347 ASNSP08243 561 aa13.23□□□□□ -0.29
SPG11-216ENST00000559347 JAG1P78504 1218 aa13.23□□□□□ -0.29
SPG11-216ENST00000559347 HDAC1Q13547 482 aaPredicted RBP13.23□□□□□ -0.29
SPG11-216ENST00000559347 AAMPQ13685 434 aa13.23□□□□□ -0.29
SPG11-216ENST00000559347 UBE3CQ15386 1083 aa13.23□□□□□ -0.29
SPG11-216ENST00000559347 GADL1Q6ZQY3 521 aa13.23□□□□□ -0.29
SPG11-216ENST00000559347 FASTKD5Q7L8L6 764 aaKnown RBP13.23□□□□□ -0.29
SPG11-216ENST00000559347 FOXP4Q8IVH2 680 aaPredicted RBP13.23□□□□□ -0.29
SPG11-216ENST00000559347 OTUD7AQ8TE49 926 aaPredicted RBP13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms