RNA–Protein interactions for RNA: ENST00000559179.1

TRPM1-210, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

TSL 1 (best) BASIC

Gene TRPM1, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-210ENST00000559179 MAP3K10Q02779 954 aa15.2■□□□□ 0.02
TRPM1-210ENST00000559179 NECAB2Q7Z6G3 386 aa15.2■□□□□ 0.02
TRPM1-210ENST00000559179 CCAR1Q8IX12 1150 aaKnown RBP15.2■□□□□ 0.02
TRPM1-210ENST00000559179 PROCA1Q8NCQ7 364 aaPredicted RBP15.2■□□□□ 0.02
TRPM1-210ENST00000559179 PAWRQ96IZ0 340 aaKnown RBP15.2■□□□□ 0.02
TRPM1-210ENST00000559179 HMG20BQ9P0W2 317 aa15.2■□□□□ 0.02
TRPM1-210ENST00000559179 MKI67P46013 3256 aaKnown RBP15.2■□□□□ 0.02
TRPM1-210ENST00000559179 IRX3P78415 501 aaPredicted RBP15.19■□□□□ 0.02
TRPM1-210ENST00000559179 OS9Q13438 667 aaPredicted RBP15.19■□□□□ 0.02
TRPM1-210ENST00000559179 FAM110CQ1W6H9 321 aa15.19■□□□□ 0.02
TRPM1-210ENST00000559179 UBE2Q1Q7Z7E8 422 aa15.19■□□□□ 0.02
TRPM1-210ENST00000559179 CRACR2BQ8N4Y2 399 aaPredicted RBP15.19■□□□□ 0.02
TRPM1-210ENST00000559179 TBC1D2Q9BYX2 928 aa15.19■□□□□ 0.02
TRPM1-210ENST00000559179 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.19■□□□□ 0.02
TRPM1-210ENST00000559179 TMOD4Q9NZQ9 345 aa15.19■□□□□ 0.02
TRPM1-210ENST00000559179 IPO8O15397 1037 aaKnown RBP15.18■□□□□ 0.02
TRPM1-210ENST00000559179 BAG3O95817 575 aa15.18■□□□□ 0.02
TRPM1-210ENST00000559179 MAP4K4O95819 1239 aaPredicted RBP15.18■□□□□ 0.02
TRPM1-210ENST00000559179 UQCRFS1P1P0C7P4 283 aa15.18■□□□□ 0.02
TRPM1-210ENST00000559179 RHBDL3P58872 404 aa15.18■□□□□ 0.02
TRPM1-210ENST00000559179 PI16Q6UXB8 463 aa15.18■□□□□ 0.02
TRPM1-210ENST00000559179 FRAT1Q92837 279 aaPredicted RBP15.18■□□□□ 0.02
TRPM1-210ENST00000559179 NSUN4Q96CB9 384 aaKnown RBP15.18■□□□□ 0.02
TRPM1-210ENST00000559179 CWC22Q9HCG8 908 aaKnown RBP15.18■□□□□ 0.02
TRPM1-210ENST00000559179 HMX1Q9NP08 348 aaPredicted RBP15.18■□□□□ 0.02
TRPM1-210ENST00000559179 STAP2Q9UGK3 403 aa15.18■□□□□ 0.02
TRPM1-210ENST00000559179 RFX7Q2KHR2 1363 aa15.17■□□□□ 0.02
TRPM1-210ENST00000559179 NPM3O75607 178 aaKnown RBP15.17■□□□□ 0.02
TRPM1-210ENST00000559179 HMGCRP04035 888 aa15.17■□□□□ 0.02
TRPM1-210ENST00000559179 GNAI2P04899 355 aa15.17■□□□□ 0.02
TRPM1-210ENST00000559179 CAP2P40123 477 aa15.17■□□□□ 0.02
TRPM1-210ENST00000559179 TTC39AQ5SRH9 613 aa15.17■□□□□ 0.02
TRPM1-210ENST00000559179 NAA16Q6N069 864 aaPredicted RBP15.17■□□□□ 0.02
TRPM1-210ENST00000559179 C7orf61Q8IZ16 206 aa15.17■□□□□ 0.02
TRPM1-210ENST00000559179 ASCC2Q9H1I8 757 aaPredicted RBP15.17■□□□□ 0.02
TRPM1-210ENST00000559179 PI4KBQ9UBF8 816 aa15.17■□□□□ 0.02
TRPM1-210ENST00000559179 HERC5Q9UII4 1024 aaKnown RBP15.17■□□□□ 0.02
TRPM1-210ENST00000559179 PTPRFP10586 1907 aa15.17■□□□□ 0.02
TRPM1-210ENST00000559179 PHIPQ8WWQ0 1821 aa15.17■□□□□ 0.02
TRPM1-210ENST00000559179 ZBTB22O15209 634 aa15.16■□□□□ 0.02
TRPM1-210ENST00000559179 CYP2B6P20813 491 aa15.16■□□□□ 0.02
TRPM1-210ENST00000559179 CCDC158Q5M9N0 1113 aa15.16■□□□□ 0.02
TRPM1-210ENST00000559179 SLC17A8Q8NDX2 589 aa15.16■□□□□ 0.02
TRPM1-210ENST00000559179 SH3RF3Q8TEJ3 882 aaPredicted RBP15.16■□□□□ 0.02
TRPM1-210ENST00000559179 PAK6Q9NQU5 681 aaPredicted RBP15.16■□□□□ 0.02
TRPM1-210ENST00000559179 SNRKQ9NRH2 765 aa15.16■□□□□ 0.02
TRPM1-210ENST00000559179 AATFQ9NY61 560 aaKnown RBP eCLIP15.16■□□□□ 0.02
TRPM1-210ENST00000559179 PLCG2P16885 1265 aa15.15■□□□□ 0.02
TRPM1-210ENST00000559179 RARSP54136 660 aaKnown RBP15.15■□□□□ 0.02
TRPM1-210ENST00000559179 MTMR2Q13614 643 aa15.15■□□□□ 0.02
TRPM1-210ENST00000559179 PDE3AQ14432 1141 aa15.15■□□□□ 0.02
TRPM1-210ENST00000559179 MAPKAPK5Q8IW41 473 aa15.15■□□□□ 0.02
TRPM1-210ENST00000559179 TRMT2AQ8IZ69 625 aaKnown RBP15.15■□□□□ 0.02
TRPM1-210ENST00000559179 DIS3LQ8TF46 1054 aaKnown RBP15.15■□□□□ 0.02
TRPM1-210ENST00000559179 ARHGAP45Q92619 1136 aa15.15■□□□□ 0.02
TRPM1-210ENST00000559179 CLUAP1Q96AJ1 413 aa15.15■□□□□ 0.02
TRPM1-210ENST00000559179 NBPF3Q9H094 633 aa15.15■□□□□ 0.02
TRPM1-210ENST00000559179 DHX36Q9H2U1 1008 aaKnown RBP15.15■□□□□ 0.02
TRPM1-210ENST00000559179 ZMYND8Q9ULU4 1186 aaPredicted RBP15.15■□□□□ 0.02
TRPM1-210ENST00000559179 ATAD5Q96QE3 1844 aa15.15■□□□□ 0.02
TRPM1-210ENST00000559179 RPTORQ8N122 1335 aa15.15■□□□□ 0.02
TRPM1-210ENST00000559179 A0A1W2PPC1 479 aa15.14■□□□□ 0.01
TRPM1-210ENST00000559179 ASNSP08243 561 aa15.14■□□□□ 0.01
TRPM1-210ENST00000559179 ANKLE1Q8NAG6 615 aa15.14■□□□□ 0.01
TRPM1-210ENST00000559179 ZNF384Q8TF68 577 aa15.14■□□□□ 0.01
TRPM1-210ENST00000559179 TGFBRAP1Q8WUH2 860 aa15.14■□□□□ 0.01
TRPM1-210ENST00000559179 NUDT12Q9BQG2 462 aa15.14■□□□□ 0.01
TRPM1-210ENST00000559179 CRISPLD2Q9H0B8 497 aa15.14■□□□□ 0.01
TRPM1-210ENST00000559179 HLA-DOAP06340 250 aa15.13■□□□□ 0.01
TRPM1-210ENST00000559179 ARID4AP29374 1257 aaPredicted RBP15.13■□□□□ 0.01
TRPM1-210ENST00000559179 MCAMP43121 646 aa15.13■□□□□ 0.01
TRPM1-210ENST00000559179 TRIM32Q13049 653 aa15.13■□□□□ 0.01
TRPM1-210ENST00000559179 MTX1Q13505 466 aa15.13■□□□□ 0.01
TRPM1-210ENST00000559179 GPRC5AQ8NFJ5 357 aa15.13■□□□□ 0.01
TRPM1-210ENST00000559179 P2RX7Q99572 595 aaKnown RBP15.13■□□□□ 0.01
TRPM1-210ENST00000559179 C11orf49Q9H6J7 331 aa15.13■□□□□ 0.01
TRPM1-210ENST00000559179 SAP30BPQ9UHR5 308 aaKnown RBP15.13■□□□□ 0.01
TRPM1-210ENST00000559179 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.13■□□□□ 0.01
TRPM1-210ENST00000559179 BRCA2P51587 3418 aa15.13■□□□□ 0.01
TRPM1-210ENST00000559179 TRIOBPQ9H2D6 2365 aa15.12■□□□□ 0.01
TRPM1-210ENST00000559179 C19orf81C9J6K1 198 aa15.12■□□□□ 0.01
TRPM1-210ENST00000559179 USP17L10C9JJH3 530 aa15.12■□□□□ 0.01
TRPM1-210ENST00000559179 GDF11O95390 407 aa15.12■□□□□ 0.01
TRPM1-210ENST00000559179 SYN1P17600 705 aa15.12■□□□□ 0.01
TRPM1-210ENST00000559179 BACE1P56817 501 aa15.12■□□□□ 0.01
TRPM1-210ENST00000559179 RRP1BQ14684 758 aaKnown RBP15.12■□□□□ 0.01
TRPM1-210ENST00000559179 SH3D19Q5HYK7 790 aa15.12■□□□□ 0.01
TRPM1-210ENST00000559179 ATF7IPQ6VMQ6 1270 aa15.12■□□□□ 0.01
TRPM1-210ENST00000559179 FOXP4Q8IVH2 680 aaPredicted RBP15.12■□□□□ 0.01
TRPM1-210ENST00000559179 LRCH3Q96II8 777 aa15.12■□□□□ 0.01
TRPM1-210ENST00000559179 PAGR1Q9BTK6 254 aa15.12■□□□□ 0.01
TRPM1-210ENST00000559179 DOCK3Q8IZD9 2030 aa15.12■□□□□ 0.01
TRPM1-210ENST00000559179 CEP290O15078 2479 aa15.11■□□□□ 0.01
TRPM1-210ENST00000559179 PNMA6EA0A0J9YXQ4 647 aa15.11■□□□□ 0.01
TRPM1-210ENST00000559179 HERVK_113P62684 666 aa15.11■□□□□ 0.01
TRPM1-210ENST00000559179 WDR78Q5VTH9 848 aa15.11■□□□□ 0.01
TRPM1-210ENST00000559179 TRIB2Q92519 343 aa15.11■□□□□ 0.01
TRPM1-210ENST00000559179 FEZ1Q99689 392 aa15.11■□□□□ 0.01
TRPM1-210ENST00000559179 WDR18Q9BV38 432 aa15.11■□□□□ 0.01
TRPM1-210ENST00000559179 PRO3102Q9H379 93 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms