RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.08□□□□□ -0.32
TPM1-217ENST00000559108 KLRG1Q96E93 195 aa13.08□□□□□ -0.32
TPM1-217ENST00000559108 MCM9Q9NXL9 1143 aa13.08□□□□□ -0.32
TPM1-217ENST00000559108 SHMT1P34896 483 aa13.07□□□□□ -0.32
TPM1-217ENST00000559108 SUPT20HL1Q3ZLR7 823 aa13.07□□□□□ -0.32
TPM1-217ENST00000559108 C12orf60Q5U649 245 aa13.07□□□□□ -0.32
TPM1-217ENST00000559108 CCDC84Q86UT8 332 aaPredicted RBP13.07□□□□□ -0.32
TPM1-217ENST00000559108 TICAM2Q86XR7 235 aa13.07□□□□□ -0.32
TPM1-217ENST00000559108 CERS3Q8IU89 383 aa13.07□□□□□ -0.32
TPM1-217ENST00000559108 ZSCAN29Q8IWY8 852 aaPredicted RBP13.07□□□□□ -0.32
TPM1-217ENST00000559108 ZKSCAN4Q969J2 545 aaPredicted RBP13.07□□□□□ -0.32
TPM1-217ENST00000559108 ZIC5Q96T25 663 aa13.07□□□□□ -0.32
TPM1-217ENST00000559108 INCENPQ9NQS7 918 aa13.07□□□□□ -0.32
TPM1-217ENST00000559108 CREBZFQ9NS37 354 aa13.07□□□□□ -0.32
TPM1-217ENST00000559108 ATP8A2Q9NTI2 1148 aa13.07□□□□□ -0.32
TPM1-217ENST00000559108 ZNF112Q9UJU3 913 aa13.07□□□□□ -0.32
TPM1-217ENST00000559108 SNCAIPQ9Y6H5 919 aa13.07□□□□□ -0.32
TPM1-217ENST00000559108 TAF6LQ9Y6J9 622 aa13.07□□□□□ -0.32
TPM1-217ENST00000559108 ROBO3Q96MS0 1386 aa13.07□□□□□ -0.32
TPM1-217ENST00000559108 PATL2C9JE40 543 aaKnown RBP13.06□□□□□ -0.32
TPM1-217ENST00000559108 GJA5P36382 358 aa13.06□□□□□ -0.32
TPM1-217ENST00000559108 HUNKP57058 714 aa13.06□□□□□ -0.32
TPM1-217ENST00000559108 VGLL4Q14135 290 aa13.06□□□□□ -0.32
TPM1-217ENST00000559108 LRRFIP1Q32MZ4 808 aaKnown RBP13.06□□□□□ -0.32
TPM1-217ENST00000559108 ESYT1Q9BSJ8 1104 aa13.06□□□□□ -0.32
TPM1-217ENST00000559108 RASSF10A6NK89 507 aa13.05□□□□□ -0.32
TPM1-217ENST00000559108 FAM155AB1AL88 458 aaPredicted RBP13.05□□□□□ -0.32
TPM1-217ENST00000559108 TBC1D12O60347 775 aa13.05□□□□□ -0.32
TPM1-217ENST00000559108 FGAP02671 866 aa13.05□□□□□ -0.32
TPM1-217ENST00000559108 COL9A3Q14050 684 aaPredicted RBP13.05□□□□□ -0.32
TPM1-217ENST00000559108 TTLL12Q14166 644 aaPredicted RBP13.05□□□□□ -0.32
TPM1-217ENST00000559108 SBK1Q52WX2 424 aa13.05□□□□□ -0.32
TPM1-217ENST00000559108 RASAL3Q86YV0 1011 aa13.05□□□□□ -0.32
TPM1-217ENST00000559108 STK11IPQ8N1F8 1099 aa13.05□□□□□ -0.32
TPM1-217ENST00000559108 WRNIP1Q96S55 665 aa13.05□□□□□ -0.32
TPM1-217ENST00000559108 EHD4Q9H223 541 aa13.05□□□□□ -0.32
TPM1-217ENST00000559108 DHX36Q9H2U1 1008 aaKnown RBP13.05□□□□□ -0.32
TPM1-217ENST00000559108 PI4KBQ9UBF8 816 aa13.05□□□□□ -0.32
TPM1-217ENST00000559108 ABT1Q9ULW3 272 aaKnown RBP13.05□□□□□ -0.32
TPM1-217ENST00000559108 RAD50Q92878 1312 aa13.05□□□□□ -0.32
TPM1-217ENST00000559108 HIP1O00291 1037 aa13.04□□□□□ -0.32
TPM1-217ENST00000559108 CDC45O75419 566 aa13.04□□□□□ -0.32
TPM1-217ENST00000559108 APPP05067 770 aa13.04□□□□□ -0.32
TPM1-217ENST00000559108 POLR3DP05423 398 aaPredicted RBP13.04□□□□□ -0.32
TPM1-217ENST00000559108 GNAT2P19087 354 aa13.04□□□□□ -0.32
TPM1-217ENST00000559108 TDO2P48775 406 aa13.04□□□□□ -0.32
TPM1-217ENST00000559108 FKBP1BP68106 108 aa13.04□□□□□ -0.32
TPM1-217ENST00000559108 CTDSPL2Q05D32 466 aa13.04□□□□□ -0.32
TPM1-217ENST00000559108 ALX1Q15699 326 aa13.04□□□□□ -0.32
TPM1-217ENST00000559108 CYP4F22Q6NT55 531 aa13.04□□□□□ -0.32
TPM1-217ENST00000559108 TATDN1Q6P1N9 297 aa13.04□□□□□ -0.32
TPM1-217ENST00000559108 GIMAP6Q6P9H5 292 aa13.04□□□□□ -0.32
TPM1-217ENST00000559108 CLEC10AQ8IUN9 316 aa13.04□□□□□ -0.32
TPM1-217ENST00000559108 TBC1D10CQ8IV04 446 aa13.04□□□□□ -0.32
TPM1-217ENST00000559108 DNAJC5GQ8N7S2 189 aa13.04□□□□□ -0.32
TPM1-217ENST00000559108 C2orf69Q8N8R5 385 aa13.04□□□□□ -0.32
TPM1-217ENST00000559108 ZNF341Q9BYN7 854 aa13.04□□□□□ -0.32
TPM1-217ENST00000559108 LSG1Q9H089 658 aaKnown RBP13.04□□□□□ -0.32
TPM1-217ENST00000559108 ELP3Q9H9T3 547 aa13.04□□□□□ -0.32
TPM1-217ENST00000559108 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.04□□□□□ -0.32
TPM1-217ENST00000559108 SERPINB13Q9UIV8 391 aa13.04□□□□□ -0.32
TPM1-217ENST00000559108 LOC285556D6RIA3 1793 aa13.04□□□□□ -0.32
TPM1-217ENST00000559108 MINDY4BA8MYZ0 360 aa13.03□□□□□ -0.32
TPM1-217ENST00000559108 GDF11O95390 407 aa13.03□□□□□ -0.32
TPM1-217ENST00000559108 GUCY1A2P33402 732 aa13.03□□□□□ -0.32
TPM1-217ENST00000559108 NF2P35240 595 aa13.03□□□□□ -0.32
TPM1-217ENST00000559108 HAND2P61296 217 aa13.03□□□□□ -0.32
TPM1-217ENST00000559108 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.03□□□□□ -0.32
TPM1-217ENST00000559108 ARPP21Q9UBL0 812 aaPredicted RBP13.03□□□□□ -0.32
TPM1-217ENST00000559108 ZMYM6O95789 1325 aa13.03□□□□□ -0.32
TPM1-217ENST00000559108 PPP1R12BO60237 982 aaPredicted RBP13.02□□□□□ -0.33
TPM1-217ENST00000559108 AOC2O75106 756 aa13.02□□□□□ -0.33
TPM1-217ENST00000559108 HLA-DOAP06340 250 aa13.02□□□□□ -0.33
TPM1-217ENST00000559108 SLC10A3P09131 477 aa13.02□□□□□ -0.33
TPM1-217ENST00000559108 CDK8P49336 464 aa13.02□□□□□ -0.33
TPM1-217ENST00000559108 VEGFBP49765 207 aa13.02□□□□□ -0.33
TPM1-217ENST00000559108 MAP3K9P80192 1104 aa13.02□□□□□ -0.33
TPM1-217ENST00000559108 PPARAQ07869 468 aa13.02□□□□□ -0.33
TPM1-217ENST00000559108 MKRN3Q13064 507 aaKnown RBP13.02□□□□□ -0.33
TPM1-217ENST00000559108 NOL9Q5SY16 702 aaKnown RBP13.02□□□□□ -0.33
TPM1-217ENST00000559108 DCAF15Q66K64 600 aa13.02□□□□□ -0.33
TPM1-217ENST00000559108 RGMBQ6NW40 437 aa13.02□□□□□ -0.33
TPM1-217ENST00000559108 C16orf86Q6ZW13 317 aa13.02□□□□□ -0.33
TPM1-217ENST00000559108 ARMC9Q7Z3E5 817 aa13.02□□□□□ -0.33
TPM1-217ENST00000559108 TTC6Q86TZ1 520 aa13.02□□□□□ -0.33
TPM1-217ENST00000559108 FOXP4Q8IVH2 680 aaPredicted RBP13.02□□□□□ -0.33
TPM1-217ENST00000559108 DSCC1Q9BVC3 393 aa13.02□□□□□ -0.33
TPM1-217ENST00000559108 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.02□□□□□ -0.33
TPM1-217ENST00000559108 NAPBQ9H115 298 aa13.02□□□□□ -0.33
TPM1-217ENST00000559108 HERC5Q9UII4 1024 aaKnown RBP13.02□□□□□ -0.33
TPM1-217ENST00000559108 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.02□□□□□ -0.33
TPM1-217ENST00000559108 MYH4Q9Y623 1939 aa13.01□□□□□ -0.33
TPM1-217ENST00000559108 PRDM1O75626 825 aa13.01□□□□□ -0.33
TPM1-217ENST00000559108 AKR1B1P15121 316 aa13.01□□□□□ -0.33
TPM1-217ENST00000559108 RASA1P20936 1047 aa13.01□□□□□ -0.33
TPM1-217ENST00000559108 CAP2P40123 477 aa13.01□□□□□ -0.33
TPM1-217ENST00000559108 IREB2P48200 963 aaKnown RBP13.01□□□□□ -0.33
TPM1-217ENST00000559108 DGKZQ13574 1117 aa13.01□□□□□ -0.33
TPM1-217ENST00000559108 STOX1Q6ZVD7 989 aa13.01□□□□□ -0.33
TPM1-217ENST00000559108 ANKRD13AQ8IZ07 590 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms