RNA–Protein interactions for RNA: ENST00000559043.1

CDC42BPB-204, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 5

Gene CDC42BPB, Length 1,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-204ENST00000559043 TACC3Q9Y6A5 838 aa18.74■□□□□ 0.59
CDC42BPB-204ENST00000559043 RPAP1Q9BWH6 1393 aaPredicted RBP18.74■□□□□ 0.59
CDC42BPB-204ENST00000559043 NPM3O75607 178 aaKnown RBP18.73■□□□□ 0.59
CDC42BPB-204ENST00000559043 XRCC6P12956 609 aaKnown RBP eCLIP18.73■□□□□ 0.59
CDC42BPB-204ENST00000559043 RASA3Q14644 834 aa18.73■□□□□ 0.59
CDC42BPB-204ENST00000559043 PRAMEF18Q5VWM3 479 aa18.73■□□□□ 0.59
CDC42BPB-204ENST00000559043 GIMAP6Q6P9H5 292 aa18.73■□□□□ 0.59
CDC42BPB-204ENST00000559043 RASEFQ8IZ41 740 aa18.73■□□□□ 0.59
CDC42BPB-204ENST00000559043 ENTPD3O75355 529 aa18.73■□□□□ 0.59
CDC42BPB-204ENST00000559043 TEPSINQ96N21 525 aa18.73■□□□□ 0.59
CDC42BPB-204ENST00000559043 NAPBQ9H115 298 aa18.73■□□□□ 0.59
CDC42BPB-204ENST00000559043 INCENPQ9NQS7 918 aa18.73■□□□□ 0.59
CDC42BPB-204ENST00000559043 TDO2P48775 406 aa18.72■□□□□ 0.59
CDC42BPB-204ENST00000559043 HAND2P61296 217 aa18.72■□□□□ 0.59
CDC42BPB-204ENST00000559043 PNMA8AQ86V59 439 aaPredicted RBP18.72■□□□□ 0.59
CDC42BPB-204ENST00000559043 FAM151AQ8WW52 585 aa18.72■□□□□ 0.59
CDC42BPB-204ENST00000559043 DEFB129Q9H1M3 183 aa18.72■□□□□ 0.59
CDC42BPB-204ENST00000559043 TMOD2Q9NZR1 351 aa18.72■□□□□ 0.59
CDC42BPB-204ENST00000559043 BRD1O95696 1058 aa18.72■□□□□ 0.59
CDC42BPB-204ENST00000559043 CYP21A2P08686 494 aa18.72■□□□□ 0.59
CDC42BPB-204ENST00000559043 MRE11P49959 708 aa18.72■□□□□ 0.59
CDC42BPB-204ENST00000559043 C12orf60Q5U649 245 aa18.72■□□□□ 0.59
CDC42BPB-204ENST00000559043 MCTP1Q6DN14 999 aa18.72■□□□□ 0.59
CDC42BPB-204ENST00000559043 FAM83AQ86UY5 434 aa18.72■□□□□ 0.59
CDC42BPB-204ENST00000559043 ZC3H15Q8WU90 426 aaKnown RBP18.72■□□□□ 0.59
CDC42BPB-204ENST00000559043 NACAP1Q9BZK3 213 aa18.72■□□□□ 0.59
CDC42BPB-204ENST00000559043 LMBRD1Q9NUN5 540 aa18.72■□□□□ 0.59
CDC42BPB-204ENST00000559043 U3KPZ7 1027 aaPredicted RBP18.72■□□□□ 0.59
CDC42BPB-204ENST00000559043 MYH1P12882 1939 aa18.71■□□□□ 0.59
CDC42BPB-204ENST00000559043 DDX60LQ5H9U9 1706 aaKnown RBP18.71■□□□□ 0.59
CDC42BPB-204ENST00000559043 MINDY4BA8MYZ0 360 aa18.71■□□□□ 0.59
CDC42BPB-204ENST00000559043 COL9A3Q14050 684 aaPredicted RBP18.71■□□□□ 0.59
CDC42BPB-204ENST00000559043 SBK1Q52WX2 424 aa18.71■□□□□ 0.59
CDC42BPB-204ENST00000559043 STK11IPQ8N1F8 1099 aa18.71■□□□□ 0.59
CDC42BPB-204ENST00000559043 NKX2-3Q8TAU0 364 aa18.71■□□□□ 0.59
CDC42BPB-204ENST00000559043 SLC27A2O14975 620 aa18.7■□□□□ 0.58
CDC42BPB-204ENST00000559043 CTDSPL2Q05D32 466 aa18.7■□□□□ 0.58
CDC42BPB-204ENST00000559043 CREB3L3Q68CJ9 461 aa18.7■□□□□ 0.58
CDC42BPB-204ENST00000559043 ZMYM6O95789 1325 aa18.7■□□□□ 0.58
CDC42BPB-204ENST00000559043 NAV1Q8NEY1 1877 aa18.7■□□□□ 0.58
CDC42BPB-204ENST00000559043 ADM5C9JUS6 153 aa18.7■□□□□ 0.58
CDC42BPB-204ENST00000559043 DYNLL2Q96FJ2 89 aa18.7■□□□□ 0.58
CDC42BPB-204ENST00000559043 TM6SF1Q9BZW5 370 aa18.7■□□□□ 0.58
CDC42BPB-204ENST00000559043 CLEC11AQ9Y240 323 aa18.7■□□□□ 0.58
CDC42BPB-204ENST00000559043 PITPNM2Q9BZ72 1349 aa18.69■□□□□ 0.58
CDC42BPB-204ENST00000559043 PPARAQ07869 468 aa18.69■□□□□ 0.58
CDC42BPB-204ENST00000559043 MAP1SQ66K74 1059 aaPredicted RBP18.69■□□□□ 0.58
CDC42BPB-204ENST00000559043 APOBEC3FQ8IUX4 373 aaKnown RBP18.69■□□□□ 0.58
CDC42BPB-204ENST00000559043 ZSCAN29Q8IWY8 852 aaPredicted RBP18.69■□□□□ 0.58
CDC42BPB-204ENST00000559043 DCPSQ96C86 337 aaKnown RBP18.69■□□□□ 0.58
CDC42BPB-204ENST00000559043 DDX49Q9Y6V7 483 aaKnown RBP18.69■□□□□ 0.58
CDC42BPB-204ENST00000559043 ATRNL1Q5VV63 1379 aa18.68■□□□□ 0.58
CDC42BPB-204ENST00000559043 KIF3CO14782 793 aa18.68■□□□□ 0.58
CDC42BPB-204ENST00000559043 POLR3DP05423 398 aaPredicted RBP18.68■□□□□ 0.58
CDC42BPB-204ENST00000559043 FMR1Q06787 632 aaKnown RBP eCLIP18.68■□□□□ 0.58
CDC42BPB-204ENST00000559043 NBPF12Q5TAG4 269 aaPredicted RBP18.68■□□□□ 0.58
CDC42BPB-204ENST00000559043 NOL8Q76FK4 1167 aaKnown RBP18.68■□□□□ 0.58
CDC42BPB-204ENST00000559043 USP48Q86UV5 1035 aa18.68■□□□□ 0.58
CDC42BPB-204ENST00000559043 TBC1D10CQ8IV04 446 aa18.68■□□□□ 0.58
CDC42BPB-204ENST00000559043 GLIS2Q9BZE0 524 aaPredicted RBP18.68■□□□□ 0.58
CDC42BPB-204ENST00000559043 GPBP1L1Q9HC44 474 aaPredicted RBP18.68■□□□□ 0.58
CDC42BPB-204ENST00000559043 CTNNA3Q9UI47 895 aa18.68■□□□□ 0.58
CDC42BPB-204ENST00000559043 SIPA1L1O43166 1804 aa18.68■□□□□ 0.58
CDC42BPB-204ENST00000559043 FAM196BA6NMK8 535 aa18.68■□□□□ 0.58
CDC42BPB-204ENST00000559043 ZNF213O14771 459 aa18.68■□□□□ 0.58
CDC42BPB-204ENST00000559043 YY1P25490 414 aa18.68■□□□□ 0.58
CDC42BPB-204ENST00000559043 AK2P54819 239 aa18.68■□□□□ 0.58
CDC42BPB-204ENST00000559043 STOX1Q6ZVD7 989 aa18.68■□□□□ 0.58
CDC42BPB-204ENST00000559043 KRT26Q7Z3Y9 468 aa18.68■□□□□ 0.58
CDC42BPB-204ENST00000559043 SLC44A5Q8NCS7 719 aa18.68■□□□□ 0.58
CDC42BPB-204ENST00000559043 GRPEL1Q9HAV7 217 aa18.68■□□□□ 0.58
CDC42BPB-204ENST00000559043 ARPP21Q9UBL0 812 aaPredicted RBP18.68■□□□□ 0.58
CDC42BPB-204ENST00000559043 ANAPC4Q9UJX5 808 aa18.68■□□□□ 0.58
CDC42BPB-204ENST00000559043 GABPAQ06546 454 aa18.67■□□□□ 0.58
CDC42BPB-204ENST00000559043 TNFAIP1Q13829 316 aa18.67■□□□□ 0.58
CDC42BPB-204ENST00000559043 DNAJC18Q9H819 358 aa18.67■□□□□ 0.58
CDC42BPB-204ENST00000559043 ZSWIM6Q9HCJ5 1215 aa18.67■□□□□ 0.58
CDC42BPB-204ENST00000559043 LIMCH1Q9UPQ0 1083 aa18.67■□□□□ 0.58
CDC42BPB-204ENST00000559043 TNNI2P48788 182 aa18.66■□□□□ 0.58
CDC42BPB-204ENST00000559043 RUFY3Q7L099 469 aa18.66■□□□□ 0.58
CDC42BPB-204ENST00000559043 CSRNP1Q96S65 589 aa18.66■□□□□ 0.58
CDC42BPB-204ENST00000559043 DHX36Q9H2U1 1008 aaKnown RBP18.66■□□□□ 0.58
CDC42BPB-204ENST00000559043 CASTP20810 708 aaKnown RBP18.66■□□□□ 0.58
CDC42BPB-204ENST00000559043 IMMTQ16891 758 aaKnown RBP18.66■□□□□ 0.58
CDC42BPB-204ENST00000559043 ADCK5Q3MIX3 580 aa18.66■□□□□ 0.58
CDC42BPB-204ENST00000559043 TTC6Q86TZ1 520 aa18.66■□□□□ 0.58
CDC42BPB-204ENST00000559043 LDHDQ86WU2 507 aa18.66■□□□□ 0.58
CDC42BPB-204ENST00000559043 GAS2L3Q86XJ1 694 aa18.66■□□□□ 0.58
CDC42BPB-204ENST00000559043 SULF1Q8IWU6 871 aa18.66■□□□□ 0.58
CDC42BPB-204ENST00000559043 PI4KBQ9UBF8 816 aa18.66■□□□□ 0.58
CDC42BPB-204ENST00000559043 FZD1Q9UP38 647 aa18.66■□□□□ 0.58
CDC42BPB-204ENST00000559043 COL2A1P02458 1487 aaPredicted RBP18.66■□□□□ 0.58
CDC42BPB-204ENST00000559043 TRAF5O00463 557 aa18.65■□□□□ 0.58
CDC42BPB-204ENST00000559043 MIGA2Q7L4E1 593 aa18.65■□□□□ 0.58
CDC42BPB-204ENST00000559043 METTL16Q86W50 562 aaKnown RBP18.65■□□□□ 0.58
CDC42BPB-204ENST00000559043 ZNF784Q8NCA9 323 aaPredicted RBP18.65■□□□□ 0.58
CDC42BPB-204ENST00000559043 RRP1BQ14684 758 aaKnown RBP18.64■□□□□ 0.58
CDC42BPB-204ENST00000559043 TSGA10IPQ3SY00 556 aa18.64■□□□□ 0.58
CDC42BPB-204ENST00000559043 CDC37L1Q7L3B6 337 aa18.64■□□□□ 0.58
CDC42BPB-204ENST00000559043 E7EWF7 191 aa18.64■□□□□ 0.57
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