RNA–Protein interactions for RNA: ENST00000558989.1

SPG11-214, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 1,816 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-214ENST00000558989 DCTPP1Q9H773 170 aa11.73□□□□□ -0.53
SPG11-214ENST00000558989 CSADQ9Y600 493 aa11.73□□□□□ -0.53
SPG11-214ENST00000558989 ATAD5Q96QE3 1844 aa11.72□□□□□ -0.53
SPG11-214ENST00000558989 INPP5BP32019 993 aa11.72□□□□□ -0.53
SPG11-214ENST00000558989 GJA5P36382 358 aa11.72□□□□□ -0.53
SPG11-214ENST00000558989 MAP3K9P80192 1104 aa11.72□□□□□ -0.53
SPG11-214ENST00000558989 SLFNL1Q499Z3 407 aa11.72□□□□□ -0.53
SPG11-214ENST00000558989 FKBP1CQ5VVH2 108 aa11.72□□□□□ -0.53
SPG11-214ENST00000558989 DCAF15Q66K64 600 aa11.72□□□□□ -0.53
SPG11-214ENST00000558989 SH3BP5LQ7L8J4 393 aa11.72□□□□□ -0.53
SPG11-214ENST00000558989 MAPKAPK5Q8IW41 473 aa11.72□□□□□ -0.53
SPG11-214ENST00000558989 TGFBRAP1Q8WUH2 860 aa11.72□□□□□ -0.53
SPG11-214ENST00000558989 OTUD5Q96G74 571 aa11.72□□□□□ -0.53
SPG11-214ENST00000558989 FAM163AQ96GL9 167 aaPredicted RBP11.72□□□□□ -0.53
SPG11-214ENST00000558989 RNF186Q9NXI6 227 aa11.72□□□□□ -0.53
SPG11-214ENST00000558989 TBC1D8O95759 1140 aa11.72□□□□□ -0.53
SPG11-214ENST00000558989 MAP4K4O95819 1239 aaPredicted RBP11.72□□□□□ -0.53
SPG11-214ENST00000558989 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.72□□□□□ -0.53
SPG11-214ENST00000558989 IDI2Q9BXS1 227 aa11.72□□□□□ -0.53
SPG11-214ENST00000558989 ZNF341Q9BYN7 854 aa11.72□□□□□ -0.53
SPG11-214ENST00000558989 BAZ2AQ9UIF9 1905 aaKnown RBP11.71□□□□□ -0.53
SPG11-214ENST00000558989 BAG3O95817 575 aa11.71□□□□□ -0.54
SPG11-214ENST00000558989 MAP3K12Q12852 859 aa11.71□□□□□ -0.54
SPG11-214ENST00000558989 PAG1Q9NWQ8 432 aa11.71□□□□□ -0.54
SPG11-214ENST00000558989 SAP30BPQ9UHR5 308 aaKnown RBP11.71□□□□□ -0.54
SPG11-214ENST00000558989 ARIH1Q9Y4X5 557 aaPredicted RBP11.71□□□□□ -0.54
SPG11-214ENST00000558989 RPAP1Q9BWH6 1393 aaPredicted RBP11.71□□□□□ -0.54
SPG11-214ENST00000558989 ENTPD3O75355 529 aa11.7□□□□□ -0.54
SPG11-214ENST00000558989 CAPN15O75808 1086 aa11.7□□□□□ -0.54
SPG11-214ENST00000558989 CHGBP05060 677 aa11.7□□□□□ -0.54
SPG11-214ENST00000558989 KCNA1Q09470 495 aa11.7□□□□□ -0.54
SPG11-214ENST00000558989 SLC9C2Q5TAH2 1124 aa11.7□□□□□ -0.54
SPG11-214ENST00000558989 ANKRD45Q5TZF3 282 aa11.7□□□□□ -0.54
SPG11-214ENST00000558989 TNS4Q8IZW8 715 aa11.7□□□□□ -0.54
SPG11-214ENST00000558989 OTUD7AQ8TE49 926 aaPredicted RBP11.7□□□□□ -0.54
SPG11-214ENST00000558989 HOOK2Q96ED9 719 aa11.7□□□□□ -0.54
SPG11-214ENST00000558989 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.7□□□□□ -0.54
SPG11-214ENST00000558989 SNCAIPQ9Y6H5 919 aa11.7□□□□□ -0.54
SPG11-214ENST00000558989 RFX7Q2KHR2 1363 aa11.7□□□□□ -0.54
SPG11-214ENST00000558989 SIPA1L1O43166 1804 aa11.7□□□□□ -0.54
SPG11-214ENST00000558989 DOCK1Q14185 1865 aa11.7□□□□□ -0.54
SPG11-214ENST00000558989 NAV1Q8NEY1 1877 aa11.7□□□□□ -0.54
SPG11-214ENST00000558989 TTF1Q15361 905 aaPredicted RBP11.7□□□□□ -0.54
SPG11-214ENST00000558989 B4GALNT3Q6L9W6 998 aa11.7□□□□□ -0.54
SPG11-214ENST00000558989 OSBPL5Q9H0X9 879 aaPredicted RBP11.7□□□□□ -0.54
SPG11-214ENST00000558989 IGSF5Q9NSI5 407 aa11.7□□□□□ -0.54
SPG11-214ENST00000558989 ZNF532Q9HCE3 1301 aa11.69□□□□□ -0.54
SPG11-214ENST00000558989 CHRM1P11229 460 aaPredicted RBP11.69□□□□□ -0.54
SPG11-214ENST00000558989 PDE6AP16499 860 aa11.69□□□□□ -0.54
SPG11-214ENST00000558989 ATP5JP18859 108 aa11.69□□□□□ -0.54
SPG11-214ENST00000558989 USP5P45974 858 aa11.69□□□□□ -0.54
SPG11-214ENST00000558989 SREBF2Q12772 1141 aa11.69□□□□□ -0.54
SPG11-214ENST00000558989 CCDC84Q86UT8 332 aaPredicted RBP11.69□□□□□ -0.54
SPG11-214ENST00000558989 PLSCR2Q9NRY7 297 aa11.69□□□□□ -0.54
SPG11-214ENST00000558989 PALD1Q9ULE6 856 aa11.69□□□□□ -0.54
SPG11-214ENST00000558989 MYH8P13535 1937 aa11.68□□□□□ -0.54
SPG11-214ENST00000558989 IGF2BP3O00425 579 aaKnown RBP eCLIP11.68□□□□□ -0.54
SPG11-214ENST00000558989 ZBTB48P10074 688 aaPredicted RBP11.68□□□□□ -0.54
SPG11-214ENST00000558989 R3HDMLQ9H3Y0 253 aa11.68□□□□□ -0.54
SPG11-214ENST00000558989 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.68□□□□□ -0.54
SPG11-214ENST00000558989 ECHDC1Q9NTX5 307 aa11.68□□□□□ -0.54
SPG11-214ENST00000558989 LAMB1P07942 1786 aa11.68□□□□□ -0.54
SPG11-214ENST00000558989 FLT1P17948 1338 aa11.68□□□□□ -0.54
SPG11-214ENST00000558989 CCL15-CCL14A0A0B4J2E2 113 aa11.67□□□□□ -0.54
SPG11-214ENST00000558989 MAGEB6P1A0A0J9YX57 407 aa11.67□□□□□ -0.54
SPG11-214ENST00000558989 MANSC4A6NHS7 340 aaPredicted RBP11.67□□□□□ -0.54
SPG11-214ENST00000558989 CA12O43570 354 aa11.67□□□□□ -0.54
SPG11-214ENST00000558989 PLCG2P16885 1265 aa11.67□□□□□ -0.54
SPG11-214ENST00000558989 NUBP1P53384 320 aa11.67□□□□□ -0.54
SPG11-214ENST00000558989 CCL15Q16663 113 aa11.67□□□□□ -0.54
SPG11-214ENST00000558989 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.67□□□□□ -0.54
SPG11-214ENST00000558989 HAUS7Q99871 368 aa11.67□□□□□ -0.54
SPG11-214ENST00000558989 PRDM10Q9NQV6 1147 aa11.67□□□□□ -0.54
SPG11-214ENST00000558989 PHIPQ8WWQ0 1821 aa11.67□□□□□ -0.54
SPG11-214ENST00000558989 IRF6O14896 467 aa11.67□□□□□ -0.54
SPG11-214ENST00000558989 TM4SF4P48230 202 aa11.67□□□□□ -0.54
SPG11-214ENST00000558989 PPP4CP60510 307 aa11.67□□□□□ -0.54
SPG11-214ENST00000558989 IFNL1Q8IU54 200 aa11.67□□□□□ -0.54
SPG11-214ENST00000558989 GPATCH3Q96I76 525 aa11.67□□□□□ -0.54
SPG11-214ENST00000558989 TRIM34Q9BYJ4 488 aa11.67□□□□□ -0.54
SPG11-214ENST00000558989 ARMT1Q9H993 441 aa11.67□□□□□ -0.54
SPG11-214ENST00000558989 PTPRFP10586 1907 aa11.67□□□□□ -0.54
SPG11-214ENST00000558989 ATRNL1Q5VV63 1379 aa11.66□□□□□ -0.54
SPG11-214ENST00000558989 SPDYE5A6NIY4 337 aa11.66□□□□□ -0.54
SPG11-214ENST00000558989 IGHDP01880 384 aa11.66□□□□□ -0.54
SPG11-214ENST00000558989 ERO1BQ86YB8 467 aa11.66□□□□□ -0.54
SPG11-214ENST00000558989 REM2Q8IYK8 340 aaPredicted RBP11.66□□□□□ -0.54
SPG11-214ENST00000558989 LCORLQ8N3X6 602 aa11.66□□□□□ -0.54
SPG11-214ENST00000558989 CRACR2BQ8N4Y2 399 aaPredicted RBP11.66□□□□□ -0.54
SPG11-214ENST00000558989 PTPN18Q99952 460 aa11.66□□□□□ -0.54
SPG11-214ENST00000558989 PHF20L1A8MW92 1017 aa11.65□□□□□ -0.54
SPG11-214ENST00000558989 SDR42E1Q8WUS8 393 aa11.65□□□□□ -0.54
SPG11-214ENST00000558989 BRI3BPQ8WY22 251 aa11.65□□□□□ -0.54
SPG11-214ENST00000558989 LNPKQ9C0E8 428 aa11.65□□□□□ -0.54
SPG11-214ENST00000558989 PICK1Q9NRD5 415 aa11.65□□□□□ -0.54
SPG11-214ENST00000558989 SAGE1Q9NXZ1 904 aa11.65□□□□□ -0.54
SPG11-214ENST00000558989 ZNF112Q9UJU3 913 aa11.65□□□□□ -0.54
SPG11-214ENST00000558989 UNCXA6NJT0 531 aa11.65□□□□□ -0.55
SPG11-214ENST00000558989 PRKAB2O43741 272 aa11.65□□□□□ -0.55
SPG11-214ENST00000558989 MBD4O95243 580 aa11.65□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms