RNA–Protein interactions for RNA: ENST00000558958.1

CLPX-203, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 1,493 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-203ENST00000558958 CNNM2Q9H8M5 875 aa21.41■■□□□ 1.02
CLPX-203ENST00000558958 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.41■■□□□ 1.02
CLPX-203ENST00000558958 NEDD4P46934 1319 aa21.41■■□□□ 1.02
CLPX-203ENST00000558958 SCN4AP35499 1836 aa21.41■■□□□ 1.02
CLPX-203ENST00000558958 HMGB1P09429 215 aaKnown RBP21.4■■□□□ 1.02
CLPX-203ENST00000558958 CPA1P15085 419 aa21.4■■□□□ 1.02
CLPX-203ENST00000558958 PDE4BQ07343 736 aa21.4■■□□□ 1.02
CLPX-203ENST00000558958 TRDNQ13061 729 aa21.4■■□□□ 1.02
CLPX-203ENST00000558958 BLOC1S2Q6QNY1 142 aa21.4■■□□□ 1.02
CLPX-203ENST00000558958 RUFY3Q7L099 469 aa21.4■■□□□ 1.02
CLPX-203ENST00000558958 ZSCAN29Q8IWY8 852 aaPredicted RBP21.4■■□□□ 1.02
CLPX-203ENST00000558958 EHD4Q9H223 541 aa21.4■■□□□ 1.02
CLPX-203ENST00000558958 TAF1DQ9H5J8 278 aaPredicted RBP21.4■■□□□ 1.02
CLPX-203ENST00000558958 PI4KBQ9UBF8 816 aa21.4■■□□□ 1.02
CLPX-203ENST00000558958 CYP46A1Q9Y6A2 500 aa21.4■■□□□ 1.02
CLPX-203ENST00000558958 ORC4O43929 436 aa21.39■■□□□ 1.02
CLPX-203ENST00000558958 NEK4P51957 841 aa21.39■■□□□ 1.02
CLPX-203ENST00000558958 GABPAQ06546 454 aa21.39■■□□□ 1.02
CLPX-203ENST00000558958 RASA3Q14644 834 aa21.39■■□□□ 1.02
CLPX-203ENST00000558958 C16orf86Q6ZW13 317 aa21.39■■□□□ 1.02
CLPX-203ENST00000558958 RALYLQ86SE5 291 aaKnown RBP21.39■■□□□ 1.02
CLPX-203ENST00000558958 APOBEC3FQ8IUX4 373 aaKnown RBP21.39■■□□□ 1.02
CLPX-203ENST00000558958 MB21D2Q8IYB1 491 aaPredicted RBP21.39■■□□□ 1.02
CLPX-203ENST00000558958 KRT23Q9C075 422 aa21.39■■□□□ 1.02
CLPX-203ENST00000558958 TMEM39BQ9GZU3 492 aa21.39■■□□□ 1.02
CLPX-203ENST00000558958 GGA3Q9NZ52 723 aa21.39■■□□□ 1.02
CLPX-203ENST00000558958 PGAP2Q9UHJ9 254 aa21.39■■□□□ 1.02
CLPX-203ENST00000558958 SERPINB13Q9UIV8 391 aa21.39■■□□□ 1.02
CLPX-203ENST00000558958 RPS6KB1P23443 525 aa21.39■■□□□ 1.01
CLPX-203ENST00000558958 DHX32Q7L7V1 743 aaKnown RBP21.39■■□□□ 1.01
CLPX-203ENST00000558958 IL27Q8NEV9 243 aa21.39■■□□□ 1.01
CLPX-203ENST00000558958 SCAF8Q9UPN6 1271 aaKnown RBP21.39■■□□□ 1.01
CLPX-203ENST00000558958 PITPNM2Q9BZ72 1349 aa21.39■■□□□ 1.01
CLPX-203ENST00000558958 B4E1Z4 1266 aa21.38■■□□□ 1.01
CLPX-203ENST00000558958 CDK8P49336 464 aa21.38■■□□□ 1.01
CLPX-203ENST00000558958 METTL16Q86W50 562 aaKnown RBP21.38■■□□□ 1.01
CLPX-203ENST00000558958 FOXP4Q8IVH2 680 aaPredicted RBP21.38■■□□□ 1.01
CLPX-203ENST00000558958 SLC44A5Q8NCS7 719 aa21.38■■□□□ 1.01
CLPX-203ENST00000558958 NKX2-3Q8TAU0 364 aa21.38■■□□□ 1.01
CLPX-203ENST00000558958 CSRNP1Q96S65 589 aa21.38■■□□□ 1.01
CLPX-203ENST00000558958 DEFB129Q9H1M3 183 aa21.38■■□□□ 1.01
CLPX-203ENST00000558958 TOMM22Q9NS69 142 aa21.38■■□□□ 1.01
CLPX-203ENST00000558958 TAOK2Q9UL54 1235 aa21.38■■□□□ 1.01
CLPX-203ENST00000558958 PRDM1O75626 825 aa21.37■■□□□ 1.01
CLPX-203ENST00000558958 EXOSC10Q01780 885 aaKnown RBP21.37■■□□□ 1.01
CLPX-203ENST00000558958 RRP12Q5JTH9 1297 aaKnown RBP21.37■■□□□ 1.01
CLPX-203ENST00000558958 ZC3H15Q8WU90 426 aaKnown RBP21.37■■□□□ 1.01
CLPX-203ENST00000558958 TTC14Q96N46 770 aa21.37■■□□□ 1.01
CLPX-203ENST00000558958 ZNF287Q9HBT7 754 aa21.37■■□□□ 1.01
CLPX-203ENST00000558958 KDM4AO75164 1064 aa21.36■■□□□ 1.01
CLPX-203ENST00000558958 MCM5P33992 734 aa21.36■■□□□ 1.01
CLPX-203ENST00000558958 PNMA8AQ86V59 439 aaPredicted RBP21.36■■□□□ 1.01
CLPX-203ENST00000558958 CDAN1Q8IWY9 1227 aa21.36■■□□□ 1.01
CLPX-203ENST00000558958 ESR2Q92731 530 aa21.36■■□□□ 1.01
CLPX-203ENST00000558958 TEPSINQ96N21 525 aa21.36■■□□□ 1.01
CLPX-203ENST00000558958 MKNK2Q9HBH9 465 aa21.36■■□□□ 1.01
CLPX-203ENST00000558958 SWAP70Q9UH65 585 aa21.36■■□□□ 1.01
CLPX-203ENST00000558958 SIPA1L1O43166 1804 aa21.35■■□□□ 1.01
CLPX-203ENST00000558958 ST18O60284 1047 aa21.35■■□□□ 1.01
CLPX-203ENST00000558958 NT5C2P49902 561 aa21.35■■□□□ 1.01
CLPX-203ENST00000558958 ANTXR2P58335 489 aa21.35■■□□□ 1.01
CLPX-203ENST00000558958 CYB5R4Q7L1T6 521 aa21.35■■□□□ 1.01
CLPX-203ENST00000558958 DNAJC18Q9H819 358 aa21.35■■□□□ 1.01
CLPX-203ENST00000558958 PDRG1Q9NUG6 133 aa21.35■■□□□ 1.01
CLPX-203ENST00000558958 ZSWIM5Q9P217 1185 aa21.35■■□□□ 1.01
CLPX-203ENST00000558958 WDR19Q8NEZ3 1342 aa21.34■■□□□ 1.01
CLPX-203ENST00000558958 RANBP6O60518 1105 aaKnown RBP21.34■■□□□ 1.01
CLPX-203ENST00000558958 VEGFAP15692 232 aaPredicted RBP21.34■■□□□ 1.01
CLPX-203ENST00000558958 RASA1P20936 1047 aa21.34■■□□□ 1.01
CLPX-203ENST00000558958 ANP32AP39687 249 aaKnown RBP21.34■■□□□ 1.01
CLPX-203ENST00000558958 CRACR2BQ8N4Y2 399 aaPredicted RBP21.34■■□□□ 1.01
CLPX-203ENST00000558958 DCPSQ96C86 337 aaKnown RBP21.34■■□□□ 1.01
CLPX-203ENST00000558958 TCEANC2Q96MN5 208 aa21.34■■□□□ 1.01
CLPX-203ENST00000558958 ALDH8A1Q9H2A2 487 aaPredicted RBP21.34■■□□□ 1.01
CLPX-203ENST00000558958 RRAGCQ9HB90 399 aa21.34■■□□□ 1.01
CLPX-203ENST00000558958 PPP2R3BQ9Y5P8 575 aa21.34■■□□□ 1.01
CLPX-203ENST00000558958 PRC1O43663 620 aa21.33■■□□□ 1.01
CLPX-203ENST00000558958 SLURP2P0DP57 97 aa21.33■■□□□ 1.01
CLPX-203ENST00000558958 SHMT1P34896 483 aa21.33■■□□□ 1.01
CLPX-203ENST00000558958 EAPPQ56P03 285 aaPredicted RBP21.33■■□□□ 1.01
CLPX-203ENST00000558958 CHST3Q7LGC8 479 aa21.33■■□□□ 1.01
CLPX-203ENST00000558958 HERC5Q9UII4 1024 aaKnown RBP21.33■■□□□ 1.01
CLPX-203ENST00000558958 TBC1D12O60347 775 aa21.32■■□□□ 1
CLPX-203ENST00000558958 CD2BP2O95400 341 aaKnown RBP21.32■■□□□ 1
CLPX-203ENST00000558958 ZNF444Q8N0Y2 327 aaPredicted RBP21.32■■□□□ 1
CLPX-203ENST00000558958 SNX21Q969T3 373 aa21.32■■□□□ 1
CLPX-203ENST00000558958 TRIM34Q9BYJ4 488 aa21.32■■□□□ 1
CLPX-203ENST00000558958 FAM196BA6NMK8 535 aa21.32■■□□□ 1
CLPX-203ENST00000558958 MAP3K10Q02779 954 aa21.32■■□□□ 1
CLPX-203ENST00000558958 FAM47AQ5JRC9 791 aa21.32■■□□□ 1
CLPX-203ENST00000558958 TATDN1Q6P1N9 297 aa21.32■■□□□ 1
CLPX-203ENST00000558958 FBXL16Q8N461 479 aa21.32■■□□□ 1
CLPX-203ENST00000558958 LRRC2Q9BYS8 371 aa21.32■■□□□ 1
CLPX-203ENST00000558958 AK2P54819 239 aa21.31■■□□□ 1
CLPX-203ENST00000558958 TFAP4Q01664 338 aa21.31■■□□□ 1
CLPX-203ENST00000558958 Q6ZUG5 572 aa21.31■■□□□ 1
CLPX-203ENST00000558958 SULF1Q8IWU6 871 aa21.31■■□□□ 1
CLPX-203ENST00000558958 MTA3Q9BTC8 594 aa21.31■■□□□ 1
CLPX-203ENST00000558958 AGXT2Q9BYV1 514 aa21.31■■□□□ 1
CLPX-203ENST00000558958 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 519.3 ms