RNA–Protein interactions for RNA: ENST00000558911.1

LRRC28-212, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 490 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-212ENST00000558911 NFIBO00712 420 aa5.03□□□□□ -1.6
LRRC28-212ENST00000558911 CPNE3O75131 537 aaKnown RBP5.03□□□□□ -1.6
LRRC28-212ENST00000558911 NEFLP07196 543 aa5.03□□□□□ -1.6
LRRC28-212ENST00000558911 C1QTNF9P0C862 333 aa5.03□□□□□ -1.6
LRRC28-212ENST00000558911 AFMP43652 599 aa5.03□□□□□ -1.6
LRRC28-212ENST00000558911 DTHD1Q6ZMT9 781 aa5.03□□□□□ -1.6
LRRC28-212ENST00000558911 C1QL4Q86Z23 238 aa5.03□□□□□ -1.6
LRRC28-212ENST00000558911 CILP2Q8IUL8 1156 aa5.03□□□□□ -1.6
LRRC28-212ENST00000558911 BHLHE22Q8NFJ8 381 aaPredicted RBP5.03□□□□□ -1.6
LRRC28-212ENST00000558911 TMC1Q8TDI8 760 aa5.03□□□□□ -1.6
LRRC28-212ENST00000558911 ACSBG1Q96GR2 724 aa5.03□□□□□ -1.6
LRRC28-212ENST00000558911 KIRREL1Q96J84 757 aa5.03□□□□□ -1.6
LRRC28-212ENST00000558911 KCNK12Q9HB15 430 aa5.03□□□□□ -1.6
LRRC28-212ENST00000558911 ABCB6Q9NP58 842 aa5.03□□□□□ -1.6
LRRC28-212ENST00000558911 GTF2IRD1Q9UHL9 959 aa5.03□□□□□ -1.6
LRRC28-212ENST00000558911 SNX11Q9Y5W9 270 aa5.03□□□□□ -1.6
LRRC28-212ENST00000558911 CEP350Q5VT06 3117 aa5.02□□□□□ -1.61
LRRC28-212ENST00000558911 RBM47A0AV96 593 aaKnown RBP5.02□□□□□ -1.61
LRRC28-212ENST00000558911 TMEM88BA6NKF7 163 aa5.02□□□□□ -1.61
LRRC28-212ENST00000558911 GNAT3A8MTJ3 354 aa5.02□□□□□ -1.61
LRRC28-212ENST00000558911 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.02□□□□□ -1.61
LRRC28-212ENST00000558911 PRRG2O14669 202 aa5.02□□□□□ -1.61
LRRC28-212ENST00000558911 TSPAN15O95858 294 aa5.02□□□□□ -1.61
LRRC28-212ENST00000558911 GLI1P08151 1106 aa5.02□□□□□ -1.61
LRRC28-212ENST00000558911 BUD31P41223 144 aaPredicted RBP5.02□□□□□ -1.61
LRRC28-212ENST00000558911 FCGRTP55899 365 aa5.02□□□□□ -1.61
LRRC28-212ENST00000558911 TMEM67Q5HYA8 995 aa5.02□□□□□ -1.61
LRRC28-212ENST00000558911 MAP1SQ66K74 1059 aaPredicted RBP5.02□□□□□ -1.61
LRRC28-212ENST00000558911 KRTAP4-5Q9BYR2 181 aa5.02□□□□□ -1.61
LRRC28-212ENST00000558911 NSUN3Q9H649 340 aaKnown RBP5.02□□□□□ -1.61
LRRC28-212ENST00000558911 CARS2Q9HA77 564 aaKnown RBP5.02□□□□□ -1.61
LRRC28-212ENST00000558911 CBX8Q9HC52 389 aa5.02□□□□□ -1.61
LRRC28-212ENST00000558911 PCDHGC5Q9Y5F6 944 aa5.02□□□□□ -1.61
LRRC28-212ENST00000558911 NCANO14594 1321 aa5.01□□□□□ -1.61
LRRC28-212ENST00000558911 NPIPB6E9PJ23 425 aa5.01□□□□□ -1.61
LRRC28-212ENST00000558911 H3BRB1 525 aa5.01□□□□□ -1.61
LRRC28-212ENST00000558911 PPP2R3AQ06190 1150 aa5.01□□□□□ -1.61
LRRC28-212ENST00000558911 PPM1JQ5JR12 505 aa5.01□□□□□ -1.61
LRRC28-212ENST00000558911 CYFIP1Q7L576 1253 aa5.01□□□□□ -1.61
LRRC28-212ENST00000558911 SPACA3Q8IXA5 215 aa5.01□□□□□ -1.61
LRRC28-212ENST00000558911 CCDC74AQ96AQ1 378 aa5.01□□□□□ -1.61
LRRC28-212ENST00000558911 TNKS2Q9H2K2 1166 aa5.01□□□□□ -1.61
LRRC28-212ENST00000558911 TUT1Q9H6E5 874 aaKnown RBP5.01□□□□□ -1.61
LRRC28-212ENST00000558911 PPM1GO15355 546 aaPredicted RBP5□□□□□ -1.61
LRRC28-212ENST00000558911 PTPN12Q05209 780 aaKnown RBP5□□□□□ -1.61
LRRC28-212ENST00000558911 GRM2Q14416 872 aa5□□□□□ -1.61
LRRC28-212ENST00000558911 NKPD1Q17RQ9 610 aa5□□□□□ -1.61
LRRC28-212ENST00000558911 RPS26P11Q5JNZ5 115 aaPredicted RBP5□□□□□ -1.61
LRRC28-212ENST00000558911 CDKAL1Q5VV42 579 aa5□□□□□ -1.61
LRRC28-212ENST00000558911 GLYCTKQ8IVS8 523 aa5□□□□□ -1.61
LRRC28-212ENST00000558911 SULF2Q8IWU5 870 aa5□□□□□ -1.61
LRRC28-212ENST00000558911 RNF214Q8ND24 703 aa5□□□□□ -1.61
LRRC28-212ENST00000558911 STK35Q8TDR2 534 aa5□□□□□ -1.61
LRRC28-212ENST00000558911 NIF3L1Q9GZT8 377 aa5□□□□□ -1.61
LRRC28-212ENST00000558911 PRDM10Q9NQV6 1147 aa5□□□□□ -1.61
LRRC28-212ENST00000558911 KRT82Q9NSB4 513 aa5□□□□□ -1.61
LRRC28-212ENST00000558911 TMEM39AQ9NV64 488 aa5□□□□□ -1.61
LRRC28-212ENST00000558911 KIAA1522Q9P206 1035 aaPredicted RBP5□□□□□ -1.61
LRRC28-212ENST00000558911 AKAP2Q9Y2D5 859 aa5□□□□□ -1.61
LRRC28-212ENST00000558911 DCDC2CA8MYV0 355 aa4.99□□□□□ -1.61
LRRC28-212ENST00000558911 EIF1AYO14602 144 aaKnown RBP4.99□□□□□ -1.61
LRRC28-212ENST00000558911 NDUFB5O43674 189 aa4.99□□□□□ -1.61
LRRC28-212ENST00000558911 TMEM253P0C7T8 217 aa4.99□□□□□ -1.61
LRRC28-212ENST00000558911 PHLDB3Q6NSJ2 640 aa4.99□□□□□ -1.61
LRRC28-212ENST00000558911 MPRIPQ6WCQ1 1025 aa4.99□□□□□ -1.61
LRRC28-212ENST00000558911 UBE3DQ7Z6J8 389 aa4.99□□□□□ -1.61
LRRC28-212ENST00000558911 FBXO15Q8NCQ5 510 aaPredicted RBP4.99□□□□□ -1.61
LRRC28-212ENST00000558911 GPBAR1Q8TDU6 330 aa4.99□□□□□ -1.61
LRRC28-212ENST00000558911 EPS8L3Q8TE67 593 aaKnown RBP4.99□□□□□ -1.61
LRRC28-212ENST00000558911 MRRFQ96E11 262 aaKnown RBP4.99□□□□□ -1.61
LRRC28-212ENST00000558911 TRAK1Q9UPV9 953 aa4.99□□□□□ -1.61
LRRC28-212ENST00000558911 FAM155AB1AL88 458 aaPredicted RBP4.98□□□□□ -1.61
LRRC28-212ENST00000558911 INHBBP09529 407 aa4.98□□□□□ -1.61
LRRC28-212ENST00000558911 ZC3H12AQ5D1E8 599 aaKnown RBP4.98□□□□□ -1.61
LRRC28-212ENST00000558911 LCE5AQ5TCM9 118 aa4.98□□□□□ -1.61
LRRC28-212ENST00000558911 PRPF40BQ6NWY9 871 aaKnown RBP4.98□□□□□ -1.61
LRRC28-212ENST00000558911 FAM214BQ7L5A3 538 aa4.98□□□□□ -1.61
LRRC28-212ENST00000558911 PDZD3Q86UT5 571 aa4.98□□□□□ -1.61
LRRC28-212ENST00000558911 C12orf40Q86WS4 652 aa4.98□□□□□ -1.61
LRRC28-212ENST00000558911 SIAH1Q8IUQ4 282 aa4.98□□□□□ -1.61
LRRC28-212ENST00000558911 ATP13A1Q9HD20 1204 aa4.98□□□□□ -1.61
LRRC28-212ENST00000558911 PITPNM2Q9BZ72 1349 aa4.97□□□□□ -1.61
LRRC28-212ENST00000558911 H3BS24 57 aa4.97□□□□□ -1.61
LRRC28-212ENST00000558911 ICMTO60725 284 aa4.97□□□□□ -1.61
LRRC28-212ENST00000558911 KRT1P04264 644 aa4.97□□□□□ -1.61
LRRC28-212ENST00000558911 ARNTP27540 789 aa4.97□□□□□ -1.61
LRRC28-212ENST00000558911 SERPINB4P48594 390 aa4.97□□□□□ -1.61
LRRC28-212ENST00000558911 ERVK-24P63145 666 aa4.97□□□□□ -1.61
LRRC28-212ENST00000558911 PDE3BQ13370 1112 aa4.97□□□□□ -1.61
LRRC28-212ENST00000558911 ATG14Q6ZNE5 492 aa4.97□□□□□ -1.61
LRRC28-212ENST00000558911 TTLL10Q6ZVT0 673 aa4.97□□□□□ -1.61
LRRC28-212ENST00000558911 CDC37L1Q7L3B6 337 aa4.97□□□□□ -1.61
LRRC28-212ENST00000558911 HSPA12BQ96MM6 686 aa4.97□□□□□ -1.61
LRRC28-212ENST00000558911 DCP1AQ9NPI6 582 aaPredicted RBP4.97□□□□□ -1.61
LRRC28-212ENST00000558911 PRDM5Q9NQX1 630 aaPredicted RBP4.97□□□□□ -1.61
LRRC28-212ENST00000558911 PPP4R2Q9NY27 417 aa4.97□□□□□ -1.61
LRRC28-212ENST00000558911 TPX2Q9ULW0 747 aaKnown RBP4.97□□□□□ -1.61
LRRC28-212ENST00000558911 TCAF2A6NFQ2 919 aa4.96□□□□□ -1.62
LRRC28-212ENST00000558911 IGF2BP3O00425 579 aaKnown RBP eCLIP4.96□□□□□ -1.62
LRRC28-212ENST00000558911 CLCN7P51798 805 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms