RNA–Protein interactions for RNA: ENST00000558910.2

TPM1-216, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-216ENST00000558910 AK9Q5TCS8 1911 aa14.67□□□□□ -0.06
TPM1-216ENST00000558910 IDH1O75874 414 aaKnown RBP14.67□□□□□ -0.06
TPM1-216ENST00000558910 GSTO1P78417 241 aa14.67□□□□□ -0.06
TPM1-216ENST00000558910 MAP3K9P80192 1104 aa14.67□□□□□ -0.06
TPM1-216ENST00000558910 VGLL4Q14135 290 aa14.67□□□□□ -0.06
TPM1-216ENST00000558910 NAA16Q6N069 864 aaPredicted RBP14.67□□□□□ -0.06
TPM1-216ENST00000558910 FAM83AQ86UY5 434 aa14.67□□□□□ -0.06
TPM1-216ENST00000558910 CLASRPQ8N2M8 674 aaKnown RBP14.67□□□□□ -0.06
TPM1-216ENST00000558910 CRBNQ96SW2 442 aa14.67□□□□□ -0.06
TPM1-216ENST00000558910 NOL10Q9BSC4 688 aaKnown RBP14.67□□□□□ -0.06
TPM1-216ENST00000558910 ANTXR1Q9H6X2 564 aa14.67□□□□□ -0.06
TPM1-216ENST00000558910 DDX4Q9NQI0 724 aaKnown RBP14.67□□□□□ -0.06
TPM1-216ENST00000558910 AATFQ9NY61 560 aaKnown RBP eCLIP14.67□□□□□ -0.06
TPM1-216ENST00000558910 CSADQ9Y600 493 aa14.67□□□□□ -0.06
TPM1-216ENST00000558910 LDHCP07864 332 aa14.66□□□□□ -0.06
TPM1-216ENST00000558910 INPP5BP32019 993 aa14.66□□□□□ -0.06
TPM1-216ENST00000558910 MAP3K11Q16584 847 aa14.66□□□□□ -0.06
TPM1-216ENST00000558910 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.66□□□□□ -0.06
TPM1-216ENST00000558910 TEX11Q8IYF3 940 aa14.66□□□□□ -0.06
TPM1-216ENST00000558910 SH3RF3Q8TEJ3 882 aaPredicted RBP14.66□□□□□ -0.06
TPM1-216ENST00000558910 KIF1BPQ96EK5 621 aa14.66□□□□□ -0.06
TPM1-216ENST00000558910 PCDHGA4Q9Y5G9 962 aa14.66□□□□□ -0.06
TPM1-216ENST00000558910 MYH2Q9UKX2 1941 aa14.66□□□□□ -0.06
TPM1-216ENST00000558910 GAKO14976 1311 aa14.66□□□□□ -0.06
TPM1-216ENST00000558910 PDS5AQ29RF7 1337 aaKnown RBP14.66□□□□□ -0.06
TPM1-216ENST00000558910 FAM196BA6NMK8 535 aa14.65□□□□□ -0.06
TPM1-216ENST00000558910 CA12O43570 354 aa14.65□□□□□ -0.06
TPM1-216ENST00000558910 CYP7A1P22680 504 aa14.65□□□□□ -0.06
TPM1-216ENST00000558910 DYNLL1P63167 89 aaKnown RBP14.65□□□□□ -0.06
TPM1-216ENST00000558910 SREBF2Q12772 1141 aa14.65□□□□□ -0.06
TPM1-216ENST00000558910 VARS2Q5ST30 1063 aaKnown RBP14.65□□□□□ -0.06
TPM1-216ENST00000558910 DCAF15Q66K64 600 aa14.65□□□□□ -0.06
TPM1-216ENST00000558910 MIGA1Q8NAN2 632 aa14.65□□□□□ -0.06
TPM1-216ENST00000558910 EDC3Q96F86 508 aaKnown RBP14.65□□□□□ -0.06
TPM1-216ENST00000558910 ZNF341Q9BYN7 854 aa14.65□□□□□ -0.06
TPM1-216ENST00000558910 CASP8AP2Q9UKL3 1982 aa14.64□□□□□ -0.07
TPM1-216ENST00000558910 DDTLA6NHG4 134 aaPredicted RBP14.64□□□□□ -0.07
TPM1-216ENST00000558910 WDHD1O75717 1129 aaPredicted RBP14.64□□□□□ -0.07
TPM1-216ENST00000558910 FKBP1CQ5VVH2 108 aa14.64□□□□□ -0.07
TPM1-216ENST00000558910 SH3BP5LQ7L8J4 393 aa14.64□□□□□ -0.07
TPM1-216ENST00000558910 ADGRA1Q86SQ6 560 aa14.64□□□□□ -0.07
TPM1-216ENST00000558910 MAPKAPK5Q8IW41 473 aa14.64□□□□□ -0.07
TPM1-216ENST00000558910 MAGEB6Q8N7X4 407 aa14.64□□□□□ -0.07
TPM1-216ENST00000558910 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.64□□□□□ -0.07
TPM1-216ENST00000558910 BOLA2Q9H3K6 86 aa14.64□□□□□ -0.07
TPM1-216ENST00000558910 R3HDMLQ9H3Y0 253 aa14.64□□□□□ -0.07
TPM1-216ENST00000558910 GPR75-ASB3A0A0A6YYF3 556 aa14.63□□□□□ -0.07
TPM1-216ENST00000558910 GOLIM4O00461 696 aa14.63□□□□□ -0.07
TPM1-216ENST00000558910 RAB11FIP3O75154 756 aa14.63□□□□□ -0.07
TPM1-216ENST00000558910 NUDT7P0C024 238 aa14.63□□□□□ -0.07
TPM1-216ENST00000558910 RHBDL3P58872 404 aa14.63□□□□□ -0.07
TPM1-216ENST00000558910 DGKZQ13574 1117 aa14.63□□□□□ -0.07
TPM1-216ENST00000558910 TGFBRAP1Q8WUH2 860 aa14.63□□□□□ -0.07
TPM1-216ENST00000558910 HOOK2Q96ED9 719 aa14.63□□□□□ -0.07
TPM1-216ENST00000558910 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.63□□□□□ -0.07
TPM1-216ENST00000558910 SAP30BPQ9UHR5 308 aaKnown RBP14.63□□□□□ -0.07
TPM1-216ENST00000558910 CCL15-CCL14A0A0B4J2E2 113 aa14.62□□□□□ -0.07
TPM1-216ENST00000558910 MANSC4A6NHS7 340 aaPredicted RBP14.62□□□□□ -0.07
TPM1-216ENST00000558910 IGF2BP3O00425 579 aaKnown RBP eCLIP14.62□□□□□ -0.07
TPM1-216ENST00000558910 CCL15Q16663 113 aa14.62□□□□□ -0.07
TPM1-216ENST00000558910 TSHZ3Q63HK5 1081 aa14.62□□□□□ -0.07
TPM1-216ENST00000558910 CCDC84Q86UT8 332 aaPredicted RBP14.62□□□□□ -0.07
TPM1-216ENST00000558910 LRRCC1Q9C099 1032 aa14.62□□□□□ -0.07
TPM1-216ENST00000558910 PCDHB15Q9Y5E8 787 aa14.62□□□□□ -0.07
TPM1-216ENST00000558910 SNCAIPQ9Y6H5 919 aa14.62□□□□□ -0.07
TPM1-216ENST00000558910 BAG3O95817 575 aa14.61□□□□□ -0.07
TPM1-216ENST00000558910 ZBTB48P10074 688 aaPredicted RBP14.61□□□□□ -0.07
TPM1-216ENST00000558910 TM4SF4P48230 202 aa14.61□□□□□ -0.07
TPM1-216ENST00000558910 SLFNL1Q499Z3 407 aa14.61□□□□□ -0.07
TPM1-216ENST00000558910 IDI2Q9BXS1 227 aa14.61□□□□□ -0.07
TPM1-216ENST00000558910 SAGE1Q9NXZ1 904 aa14.61□□□□□ -0.07
TPM1-216ENST00000558910 AKAP11Q9UKA4 1901 aa14.6□□□□□ -0.07
TPM1-216ENST00000558910 OTOFQ9HC10 1997 aa14.6□□□□□ -0.07
TPM1-216ENST00000558910 ENTPD3O75355 529 aa14.6□□□□□ -0.07
TPM1-216ENST00000558910 PDE4AP27815 886 aa14.6□□□□□ -0.07
TPM1-216ENST00000558910 ZNF512BQ96KM6 892 aaPredicted RBP14.6□□□□□ -0.07
TPM1-216ENST00000558910 PTPN18Q99952 460 aa14.6□□□□□ -0.07
TPM1-216ENST00000558910 MCOLN1Q9GZU1 580 aa14.6□□□□□ -0.07
TPM1-216ENST00000558910 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.6□□□□□ -0.07
TPM1-216ENST00000558910 CCDC85CA6NKD9 419 aa14.59□□□□□ -0.07
TPM1-216ENST00000558910 IRF6O14896 467 aa14.59□□□□□ -0.07
TPM1-216ENST00000558910 MAP4K4O95819 1239 aaPredicted RBP14.59□□□□□ -0.07
TPM1-216ENST00000558910 USP5P45974 858 aa14.59□□□□□ -0.07
TPM1-216ENST00000558910 IRX6P78412 446 aaPredicted RBP14.59□□□□□ -0.07
TPM1-216ENST00000558910 MAP3K12Q12852 859 aa14.59□□□□□ -0.07
TPM1-216ENST00000558910 PPP1R15BQ5SWA1 713 aa14.59□□□□□ -0.07
TPM1-216ENST00000558910 ERO1BQ86YB8 467 aa14.59□□□□□ -0.07
TPM1-216ENST00000558910 ZNF296Q8WUU4 475 aaPredicted RBP14.59□□□□□ -0.07
TPM1-216ENST00000558910 BRI3BPQ8WY22 251 aa14.59□□□□□ -0.07
TPM1-216ENST00000558910 KRTAP3-3Q9BYR6 98 aa14.59□□□□□ -0.07
TPM1-216ENST00000558910 KRTAP3-2Q9BYR7 98 aa14.59□□□□□ -0.07
TPM1-216ENST00000558910 OSBPL5Q9H0X9 879 aaPredicted RBP14.59□□□□□ -0.07
TPM1-216ENST00000558910 RPAP1Q9BWH6 1393 aaPredicted RBP14.59□□□□□ -0.07
TPM1-216ENST00000558910 MYO5AQ9Y4I1 1855 aaKnown RBP14.59□□□□□ -0.07
TPM1-216ENST00000558910 SPDYE5A6NIY4 337 aa14.58□□□□□ -0.08
TPM1-216ENST00000558910 GPR25O00155 361 aa14.58□□□□□ -0.08
TPM1-216ENST00000558910 CHGBP05060 677 aa14.58□□□□□ -0.08
TPM1-216ENST00000558910 GTF2A2P52657 109 aa14.58□□□□□ -0.08
TPM1-216ENST00000558910 SLC9C2Q5TAH2 1124 aa14.58□□□□□ -0.08
TPM1-216ENST00000558910 ABHD8Q96I13 439 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms