RNA–Protein interactions for RNA: ENST00000558894.5

SMAD3-209, Transcript of SMAD family member 3, humanhuman

TSL 5

Gene SMAD3, Length 797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-209ENST00000558894 CYP2C8P10632 490 aa6.83□□□□□ -1.32
SMAD3-209ENST00000558894 CCDC84Q86UT8 332 aaPredicted RBP6.83□□□□□ -1.32
SMAD3-209ENST00000558894 TRIM47Q96LD4 638 aa6.83□□□□□ -1.32
SMAD3-209ENST00000558894 DNAJC18Q9H819 358 aa6.83□□□□□ -1.32
SMAD3-209ENST00000558894 CPA4Q9UI42 421 aa6.83□□□□□ -1.32
SMAD3-209ENST00000558894 ZHX2Q9Y6X8 837 aa6.83□□□□□ -1.32
SMAD3-209ENST00000558894 BAZ2AQ9UIF9 1905 aaKnown RBP6.83□□□□□ -1.32
SMAD3-209ENST00000558894 LDHCP07864 332 aa6.82□□□□□ -1.32
SMAD3-209ENST00000558894 EN2P19622 333 aaPredicted RBP6.82□□□□□ -1.32
SMAD3-209ENST00000558894 ZAP70P43403 619 aa6.82□□□□□ -1.32
SMAD3-209ENST00000558894 SHROOM1Q2M3G4 852 aaPredicted RBP6.82□□□□□ -1.32
SMAD3-209ENST00000558894 TREML2Q5T2D2 321 aa6.82□□□□□ -1.32
SMAD3-209ENST00000558894 PRPF38BQ5VTL8 546 aaKnown RBP6.82□□□□□ -1.32
SMAD3-209ENST00000558894 ITPRIPQ8IWB1 547 aa6.82□□□□□ -1.32
SMAD3-209ENST00000558894 SLF2Q8IX21 1173 aa6.82□□□□□ -1.32
SMAD3-209ENST00000558894 CCDC8Q9H0W5 538 aaPredicted RBP6.82□□□□□ -1.32
SMAD3-209ENST00000558894 ANTXR1Q9H6X2 564 aa6.82□□□□□ -1.32
SMAD3-209ENST00000558894 RAI14Q9P0K7 980 aa6.82□□□□□ -1.32
SMAD3-209ENST00000558894 SLC45A1Q9Y2W3 748 aa6.82□□□□□ -1.32
SMAD3-209ENST00000558894 NDUFB9Q9Y6M9 179 aa6.82□□□□□ -1.32
SMAD3-209ENST00000558894 FRMPD3Q5JV73 1810 aa6.82□□□□□ -1.32
SMAD3-209ENST00000558894 FLT1P17948 1338 aa6.81□□□□□ -1.32
SMAD3-209ENST00000558894 IGSF3O75054 1194 aa6.81□□□□□ -1.32
SMAD3-209ENST00000558894 GNRH1P01148 92 aa6.81□□□□□ -1.32
SMAD3-209ENST00000558894 OSBPP22059 807 aa6.81□□□□□ -1.32
SMAD3-209ENST00000558894 CAP2P40123 477 aa6.81□□□□□ -1.32
SMAD3-209ENST00000558894 DYNLL1P63167 89 aaKnown RBP6.81□□□□□ -1.32
SMAD3-209ENST00000558894 GSTO1P78417 241 aa6.81□□□□□ -1.32
SMAD3-209ENST00000558894 CCDC158Q5M9N0 1113 aa6.81□□□□□ -1.32
SMAD3-209ENST00000558894 TTC39AQ5SRH9 613 aa6.81□□□□□ -1.32
SMAD3-209ENST00000558894 GORABQ5T7V8 394 aa6.81□□□□□ -1.32
SMAD3-209ENST00000558894 POTEEQ6S8J3 1075 aa6.81□□□□□ -1.32
SMAD3-209ENST00000558894 FTSJ3Q8IY81 847 aaKnown RBP6.81□□□□□ -1.32
SMAD3-209ENST00000558894 SH3TC2Q8TF17 1288 aa6.81□□□□□ -1.32
SMAD3-209ENST00000558894 ZBTB40Q9NUA8 1239 aa6.81□□□□□ -1.32
SMAD3-209ENST00000558894 RNF216Q9NWF9 866 aaPredicted RBP6.81□□□□□ -1.32
SMAD3-209ENST00000558894 AATFQ9NY61 560 aaKnown RBP eCLIP6.81□□□□□ -1.32
SMAD3-209ENST00000558894 LRP2BPQ9P2M1 347 aa6.81□□□□□ -1.32
SMAD3-209ENST00000558894 SRRDQ9UH36 339 aa6.81□□□□□ -1.32
SMAD3-209ENST00000558894 EXOC6BQ9Y2D4 811 aa6.81□□□□□ -1.32
SMAD3-209ENST00000558894 A0A0G2JMZ2 1700 aa6.81□□□□□ -1.32
SMAD3-209ENST00000558894 GREB1LQ9C091 1923 aaPredicted RBP6.8□□□□□ -1.32
SMAD3-209ENST00000558894 TRIM75PA6NK02 468 aa6.8□□□□□ -1.32
SMAD3-209ENST00000558894 HOXD11P31277 338 aaPredicted RBP6.8□□□□□ -1.32
SMAD3-209ENST00000558894 PSMC4P43686 418 aa6.8□□□□□ -1.32
SMAD3-209ENST00000558894 PRMT2P55345 433 aa6.8□□□□□ -1.32
SMAD3-209ENST00000558894 MTFR1Q15390 333 aa6.8□□□□□ -1.32
SMAD3-209ENST00000558894 SH3D19Q5HYK7 790 aa6.8□□□□□ -1.32
SMAD3-209ENST00000558894 C20orf194Q5TEA3 1177 aa6.8□□□□□ -1.32
SMAD3-209ENST00000558894 NAA16Q6N069 864 aaPredicted RBP6.8□□□□□ -1.32
SMAD3-209ENST00000558894 FASTKD5Q7L8L6 764 aaKnown RBP6.8□□□□□ -1.32
SMAD3-209ENST00000558894 UBE2Q1Q7Z7E8 422 aa6.8□□□□□ -1.32
SMAD3-209ENST00000558894 MAPKAPK5Q8IW41 473 aa6.8□□□□□ -1.32
SMAD3-209ENST00000558894 ZSCAN29Q8IWY8 852 aaPredicted RBP6.8□□□□□ -1.32
SMAD3-209ENST00000558894 TEX11Q8IYF3 940 aa6.8□□□□□ -1.32
SMAD3-209ENST00000558894 RHPN1Q8TCX5 695 aa6.8□□□□□ -1.32
SMAD3-209ENST00000558894 SHISA4Q96DD7 197 aa6.8□□□□□ -1.32
SMAD3-209ENST00000558894 RIOK1Q9BRS2 568 aaKnown RBP6.8□□□□□ -1.32
SMAD3-209ENST00000558894 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.8□□□□□ -1.321e-8■■■■□ 20.2
SMAD3-209ENST00000558894 PI4KBQ9UBF8 816 aa6.8□□□□□ -1.32
SMAD3-209ENST00000558894 PALD1Q9ULE6 856 aa6.8□□□□□ -1.32
SMAD3-209ENST00000558894 GABRQQ9UN88 632 aa6.8□□□□□ -1.32
SMAD3-209ENST00000558894 AGTPBP1Q9UPW5 1226 aa6.8□□□□□ -1.32
SMAD3-209ENST00000558894 COL11A1P12107 1806 aaPredicted RBP6.79□□□□□ -1.32
SMAD3-209ENST00000558894 TCRBV5S4A2TA0A5A2 114 aa6.79□□□□□ -1.32
SMAD3-209ENST00000558894 ECM2O94769 699 aaPredicted RBP6.79□□□□□ -1.32
SMAD3-209ENST00000558894 EVX2Q03828 476 aa6.79□□□□□ -1.32
SMAD3-209ENST00000558894 PRKCZQ05513 592 aa6.79□□□□□ -1.32
SMAD3-209ENST00000558894 SPP2Q13103 211 aa6.79□□□□□ -1.32
SMAD3-209ENST00000558894 SLC9C1Q4G0N8 1177 aa6.79□□□□□ -1.32
SMAD3-209ENST00000558894 TATDN1Q6P1N9 297 aa6.79□□□□□ -1.32
SMAD3-209ENST00000558894 FOXP4Q8IVH2 680 aaPredicted RBP6.79□□□□□ -1.32
SMAD3-209ENST00000558894 RPAP2Q8IXW5 612 aaPredicted RBP6.79□□□□□ -1.32
SMAD3-209ENST00000558894 PROCA1Q8NCQ7 364 aaPredicted RBP6.79□□□□□ -1.32
SMAD3-209ENST00000558894 ZNF280CQ8ND82 737 aa6.79□□□□□ -1.32
SMAD3-209ENST00000558894 TGFBRAP1Q8WUH2 860 aa6.79□□□□□ -1.32
SMAD3-209ENST00000558894 PARK7Q99497 189 aaKnown RBP6.79□□□□□ -1.32
SMAD3-209ENST00000558894 WDR18Q9BV38 432 aa6.79□□□□□ -1.32
SMAD3-209ENST00000558894 DHX36Q9H2U1 1008 aaKnown RBP6.79□□□□□ -1.32
SMAD3-209ENST00000558894 IL1RAPL2Q9NP60 686 aa6.79□□□□□ -1.32
SMAD3-209ENST00000558894 PICK1Q9NRD5 415 aa6.79□□□□□ -1.32
SMAD3-209ENST00000558894 HERC5Q9UII4 1024 aaKnown RBP6.79□□□□□ -1.32
SMAD3-209ENST00000558894 COG6Q9Y2V7 657 aa6.79□□□□□ -1.32
SMAD3-209ENST00000558894 MYPNQ86TC9 1320 aa6.78□□□□□ -1.32
SMAD3-209ENST00000558894 ZNFX1Q9P2E3 1918 aaKnown RBP6.78□□□□□ -1.32
SMAD3-209ENST00000558894 RANBP2P49792 3224 aaKnown RBP6.78□□□□□ -1.32
SMAD3-209ENST00000558894 USP17L5A8MUK1 530 aa6.78□□□□□ -1.32
SMAD3-209ENST00000558894 PEX10O60683 326 aa6.78□□□□□ -1.32
SMAD3-209ENST00000558894 BAG3O95817 575 aa6.78□□□□□ -1.32
SMAD3-209ENST00000558894 CHGBP05060 677 aa6.78□□□□□ -1.32
SMAD3-209ENST00000558894 CYP7A1P22680 504 aa6.78□□□□□ -1.32
SMAD3-209ENST00000558894 HMGCS2P54868 508 aa6.78□□□□□ -1.32
SMAD3-209ENST00000558894 OS9Q13438 667 aaPredicted RBP6.78□□□□□ -1.32
SMAD3-209ENST00000558894 ARHGEF6Q15052 776 aa6.78□□□□□ -1.32
SMAD3-209ENST00000558894 GADL1Q6ZQY3 521 aa6.78□□□□□ -1.32
SMAD3-209ENST00000558894 AACSQ86V21 672 aa6.78□□□□□ -1.32
SMAD3-209ENST00000558894 MAGEB6Q8N7X4 407 aa6.78□□□□□ -1.32
SMAD3-209ENST00000558894 MIGA1Q8NAN2 632 aa6.78□□□□□ -1.32
SMAD3-209ENST00000558894 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.78□□□□□ -1.32
SMAD3-209ENST00000558894 GJD2Q9UKL4 321 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms