RNA–Protein interactions for RNA: ENST00000558855.5

VPS18-203, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS18, Length 1,050 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-203ENST00000558855 LRP2BPQ9P2M1 347 aa16.66■□□□□ 0.26
VPS18-203ENST00000558855 TRIM75PA6NK02 468 aa16.65■□□□□ 0.26
VPS18-203ENST00000558855 CXCL11O14625 94 aa16.65■□□□□ 0.26
VPS18-203ENST00000558855 NPM3O75607 178 aaKnown RBP16.65■□□□□ 0.26
VPS18-203ENST00000558855 OSBPP22059 807 aa16.65■□□□□ 0.26
VPS18-203ENST00000558855 TREML2Q5T2D2 321 aa16.65■□□□□ 0.26
VPS18-203ENST00000558855 ANTXR1Q9H6X2 564 aa16.65■□□□□ 0.26
VPS18-203ENST00000558855 TBC1D12O60347 775 aa16.64■□□□□ 0.25
VPS18-203ENST00000558855 CTNND1O60716 968 aaKnown RBP16.64■□□□□ 0.25
VPS18-203ENST00000558855 LDHCP07864 332 aa16.64■□□□□ 0.25
VPS18-203ENST00000558855 PSMC4P43686 418 aa16.64■□□□□ 0.25
VPS18-203ENST00000558855 GSTO1P78417 241 aa16.64■□□□□ 0.25
VPS18-203ENST00000558855 SLC4A8Q2Y0W8 1093 aa16.64■□□□□ 0.25
VPS18-203ENST00000558855 SLC9C1Q4G0N8 1177 aa16.64■□□□□ 0.25
VPS18-203ENST00000558855 PRPF38BQ5VTL8 546 aaKnown RBP16.64■□□□□ 0.25
VPS18-203ENST00000558855 NAA16Q6N069 864 aaPredicted RBP16.64■□□□□ 0.25
VPS18-203ENST00000558855 MAPKAPK5Q8IW41 473 aa16.64■□□□□ 0.25
VPS18-203ENST00000558855 SIRT2Q8IXJ6 389 aa16.64■□□□□ 0.25
VPS18-203ENST00000558855 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.64■□□□□ 0.25
VPS18-203ENST00000558855 PICK1Q9NRD5 415 aa16.64■□□□□ 0.25
VPS18-203ENST00000558855 GABRQQ9UN88 632 aa16.64■□□□□ 0.25
VPS18-203ENST00000558855 MTFR1Q15390 333 aa16.63■□□□□ 0.25
VPS18-203ENST00000558855 TGFBRAP1Q8WUH2 860 aa16.63■□□□□ 0.25
VPS18-203ENST00000558855 ZNF512BQ96KM6 892 aaPredicted RBP16.63■□□□□ 0.25
VPS18-203ENST00000558855 FLT1P17948 1338 aa16.63■□□□□ 0.25
VPS18-203ENST00000558855 MYH7P12883 1935 aa16.62■□□□□ 0.25
VPS18-203ENST00000558855 CCDC158Q5M9N0 1113 aa16.62■□□□□ 0.25
VPS18-203ENST00000558855 SHISA4Q96DD7 197 aa16.62■□□□□ 0.25
VPS18-203ENST00000558855 IL1RAPL2Q9NP60 686 aa16.62■□□□□ 0.25
VPS18-203ENST00000558855 SRRDQ9UH36 339 aa16.62■□□□□ 0.25
VPS18-203ENST00000558855 PEX10O60683 326 aa16.61■□□□□ 0.25
VPS18-203ENST00000558855 CAP2P40123 477 aa16.61■□□□□ 0.25
VPS18-203ENST00000558855 PPP4CP60510 307 aa16.61■□□□□ 0.25
VPS18-203ENST00000558855 EVX2Q03828 476 aa16.61■□□□□ 0.25
VPS18-203ENST00000558855 PRKCZQ05513 592 aa16.61■□□□□ 0.25
VPS18-203ENST00000558855 PARK7Q99497 189 aaKnown RBP16.61■□□□□ 0.25
VPS18-203ENST00000558855 SAP30BPQ9UHR5 308 aaKnown RBP16.61■□□□□ 0.25
VPS18-203ENST00000558855 PALD1Q9ULE6 856 aa16.61■□□□□ 0.25
VPS18-203ENST00000558855 COG6Q9Y2V7 657 aa16.61■□□□□ 0.25
VPS18-203ENST00000558855 ALPK3Q96L96 1907 aa16.6■□□□□ 0.25
VPS18-203ENST00000558855 FMNL1O95466 1100 aaPredicted RBP16.6■□□□□ 0.25
VPS18-203ENST00000558855 SPP2Q13103 211 aa16.6■□□□□ 0.25
VPS18-203ENST00000558855 KIF22Q14807 665 aa16.6■□□□□ 0.25
VPS18-203ENST00000558855 C20orf194Q5TEA3 1177 aa16.6■□□□□ 0.25
VPS18-203ENST00000558855 AACSQ86V21 672 aa16.6■□□□□ 0.25
VPS18-203ENST00000558855 MIGA1Q8NAN2 632 aa16.6■□□□□ 0.25
VPS18-203ENST00000558855 AGTPBP1Q9UPW5 1226 aa16.6■□□□□ 0.25
VPS18-203ENST00000558855 MYPNQ86TC9 1320 aa16.6■□□□□ 0.25
VPS18-203ENST00000558855 BAZ2AQ9UIF9 1905 aaKnown RBP16.6■□□□□ 0.25
VPS18-203ENST00000558855 GDF11O95390 407 aa16.59■□□□□ 0.25
VPS18-203ENST00000558855 MAP4K4O95819 1239 aaPredicted RBP16.59■□□□□ 0.25
VPS18-203ENST00000558855 CYP7A1P22680 504 aa16.59■□□□□ 0.25
VPS18-203ENST00000558855 HMGCS2P54868 508 aa16.59■□□□□ 0.25
VPS18-203ENST00000558855 FASTKD5Q7L8L6 764 aaKnown RBP16.59■□□□□ 0.25
VPS18-203ENST00000558855 APBB1O00213 710 aa16.58■□□□□ 0.24
VPS18-203ENST00000558855 IDH1O75874 414 aaKnown RBP16.58■□□□□ 0.24
VPS18-203ENST00000558855 SLFNL1Q499Z3 407 aa16.58■□□□□ 0.24
VPS18-203ENST00000558855 METTL16Q86W50 562 aaKnown RBP16.58■□□□□ 0.24
VPS18-203ENST00000558855 MAGEB6Q8N7X4 407 aa16.58■□□□□ 0.24
VPS18-203ENST00000558855 RHPN1Q8TCX5 695 aa16.58■□□□□ 0.24
VPS18-203ENST00000558855 EDC3Q96F86 508 aaKnown RBP16.58■□□□□ 0.24
VPS18-203ENST00000558855 SLC45A1Q9Y2W3 748 aa16.58■□□□□ 0.24
VPS18-203ENST00000558855 MYH8P13535 1937 aa16.58■□□□□ 0.24
VPS18-203ENST00000558855 ARHGEF6Q15052 776 aa16.57■□□□□ 0.24
VPS18-203ENST00000558855 POTEEQ6S8J3 1075 aa16.57■□□□□ 0.24
VPS18-203ENST00000558855 ANKRD13CQ8N6S4 541 aa16.57■□□□□ 0.24
VPS18-203ENST00000558855 ZNF280CQ8ND82 737 aa16.57■□□□□ 0.24
VPS18-203ENST00000558855 ZBTB40Q9NUA8 1239 aa16.57■□□□□ 0.24
VPS18-203ENST00000558855 HERC5Q9UII4 1024 aaKnown RBP16.57■□□□□ 0.24
VPS18-203ENST00000558855 USP17L5A8MUK1 530 aa16.56■□□□□ 0.24
VPS18-203ENST00000558855 GNRH1P01148 92 aa16.56■□□□□ 0.24
VPS18-203ENST00000558855 CHGBP05060 677 aa16.56■□□□□ 0.24
VPS18-203ENST00000558855 ELNP15502 786 aa16.56■□□□□ 0.24
VPS18-203ENST00000558855 GRK4P32298 578 aa16.56■□□□□ 0.24
VPS18-203ENST00000558855 PRMT2P55345 433 aa16.56■□□□□ 0.24
VPS18-203ENST00000558855 NOL10Q9BSC4 688 aaKnown RBP16.56■□□□□ 0.24
VPS18-203ENST00000558855 TMEM106CQ9BVX2 250 aa16.56■□□□□ 0.24
VPS18-203ENST00000558855 PI4KBQ9UBF8 816 aa16.56■□□□□ 0.24
VPS18-203ENST00000558855 BAG3O95817 575 aa16.55■□□□□ 0.24
VPS18-203ENST00000558855 FLT3LGP49771 235 aa16.55■□□□□ 0.24
VPS18-203ENST00000558855 FCGRTP55899 365 aa16.55■□□□□ 0.24
VPS18-203ENST00000558855 MTMR2Q13614 643 aa16.55■□□□□ 0.24
VPS18-203ENST00000558855 SH3D19Q5HYK7 790 aa16.55■□□□□ 0.24
VPS18-203ENST00000558855 NBPF11Q86T75 865 aa16.55■□□□□ 0.24
VPS18-203ENST00000558855 PROCA1Q8NCQ7 364 aaPredicted RBP16.55■□□□□ 0.24
VPS18-203ENST00000558855 RAET1EQ8TD07 263 aa16.55■□□□□ 0.24
VPS18-203ENST00000558855 RIOK1Q9BRS2 568 aaKnown RBP16.55■□□□□ 0.24
VPS18-203ENST00000558855 ASCC2Q9H1I8 757 aaPredicted RBP16.55■□□□□ 0.24
VPS18-203ENST00000558855 CCL5P13501 91 aa16.54■□□□□ 0.24
VPS18-203ENST00000558855 PLCG2P16885 1265 aa16.54■□□□□ 0.24
VPS18-203ENST00000558855 SMCR8Q8TEV9 937 aaPredicted RBP16.54■□□□□ 0.24
VPS18-203ENST00000558855 BCL11AQ9H165 835 aa16.54■□□□□ 0.24
VPS18-203ENST00000558855 UNC93B1Q9H1C4 597 aa16.54■□□□□ 0.24
VPS18-203ENST00000558855 DHX36Q9H2U1 1008 aaKnown RBP16.54■□□□□ 0.24
VPS18-203ENST00000558855 ZBTB21Q9ULJ3 1066 aa16.54■□□□□ 0.24
VPS18-203ENST00000558855 RLFQ13129 1914 aa16.54■□□□□ 0.24
VPS18-203ENST00000558855 PARP14Q460N5 1801 aa16.54■□□□□ 0.24
VPS18-203ENST00000558855 TCRBV5S4A2TA0A5A2 114 aa16.53■□□□□ 0.24
VPS18-203ENST00000558855 SMIM22K7EJ46 135 aa16.53■□□□□ 0.24
VPS18-203ENST00000558855 WDR18Q9BV38 432 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms