RNA–Protein interactions for RNA: ENST00000558790.5

SPG11-212, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 858 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-212ENST00000558790 COA1Q9GZY4 146 aa12.37□□□□□ -0.43
SPG11-212ENST00000558790 FKBPLQ9UIM3 349 aa12.37□□□□□ -0.43
SPG11-212ENST00000558790 NF2P35240 595 aa12.36□□□□□ -0.43
SPG11-212ENST00000558790 NEXNQ0ZGT2 675 aa12.36□□□□□ -0.43
SPG11-212ENST00000558790 LINC01559Q495D7 138 aa12.36□□□□□ -0.43
SPG11-212ENST00000558790 MYH13Q9UKX3 1938 aa12.36□□□□□ -0.43
SPG11-212ENST00000558790 ZNF804BA4D1E1 1349 aa12.36□□□□□ -0.43
SPG11-212ENST00000558790 IGHMBP2P38935 993 aaKnown RBP12.35□□□□□ -0.43
SPG11-212ENST00000558790 TM4SF4P48230 202 aa12.35□□□□□ -0.43
SPG11-212ENST00000558790 PRKG1Q13976 671 aa12.35□□□□□ -0.43
SPG11-212ENST00000558790 G2E3Q7L622 706 aa12.35□□□□□ -0.43
SPG11-212ENST00000558790 APOBEC3FQ8IUX4 373 aaKnown RBP12.35□□□□□ -0.43
SPG11-212ENST00000558790 KIAA0825Q8IV33 1275 aa12.35□□□□□ -0.43
SPG11-212ENST00000558790 STK31Q9BXU1 1019 aa12.35□□□□□ -0.43
SPG11-212ENST00000558790 FZD1Q9UP38 647 aa12.35□□□□□ -0.43
SPG11-212ENST00000558790 LAMA2P24043 3122 aaKnown RBP12.34□□□□□ -0.43
SPG11-212ENST00000558790 H7C1W4 665 aa12.34□□□□□ -0.43
SPG11-212ENST00000558790 ITGA6P23229 1130 aa12.34□□□□□ -0.43
SPG11-212ENST00000558790 PTPN12Q05209 780 aaKnown RBP12.34□□□□□ -0.43
SPG11-212ENST00000558790 SREBF2Q12772 1141 aa12.34□□□□□ -0.43
SPG11-212ENST00000558790 NOM1Q5C9Z4 860 aaKnown RBP12.34□□□□□ -0.43
SPG11-212ENST00000558790 TTLL5Q6EMB2 1281 aa12.34□□□□□ -0.43
SPG11-212ENST00000558790 ZBED3Q96IU2 234 aaPredicted RBP12.34□□□□□ -0.43
SPG11-212ENST00000558790 CHMP4AQ9BY43 222 aa12.34□□□□□ -0.43
SPG11-212ENST00000558790 LEMD3Q9Y2U8 911 aa12.34□□□□□ -0.43
SPG11-212ENST00000558790 PRUNE2Q8WUY3 3088 aa12.34□□□□□ -0.43
SPG11-212ENST00000558790 IRS2Q9Y4H2 1338 aa12.34□□□□□ -0.43
SPG11-212ENST00000558790 ZSWIM8A7E2V4 1837 aa12.33□□□□□ -0.44
SPG11-212ENST00000558790 CASP7P55210 303 aa12.33□□□□□ -0.44
SPG11-212ENST00000558790 GTF2IP78347 998 aa12.33□□□□□ -0.44
SPG11-212ENST00000558790 GCKRQ14397 625 aa12.33□□□□□ -0.44
SPG11-212ENST00000558790 SPRYD7Q5W111 196 aa12.33□□□□□ -0.44
SPG11-212ENST00000558790 ARMC9Q7Z3E5 817 aa12.33□□□□□ -0.44
SPG11-212ENST00000558790 BAP1Q92560 729 aa12.33□□□□□ -0.44
SPG11-212ENST00000558790 PLA2G12BQ9BX93 195 aa12.33□□□□□ -0.44
SPG11-212ENST00000558790 CFHR5Q9BXR6 569 aa12.33□□□□□ -0.44
SPG11-212ENST00000558790 ANGEL1Q9UNK9 670 aaKnown RBP12.33□□□□□ -0.44
SPG11-212ENST00000558790 SOX1O00570 391 aaPredicted RBP12.32□□□□□ -0.44
SPG11-212ENST00000558790 TRAK2O60296 914 aa12.32□□□□□ -0.44
SPG11-212ENST00000558790 FKTNO75072 461 aa12.32□□□□□ -0.44
SPG11-212ENST00000558790 CAP1Q01518 475 aa12.32□□□□□ -0.44
SPG11-212ENST00000558790 CHRNDQ07001 517 aa12.32□□□□□ -0.44
SPG11-212ENST00000558790 TWISTNBQ3B726 338 aaPredicted RBP12.32□□□□□ -0.44
SPG11-212ENST00000558790 LDLRAD1Q5T700 205 aa12.32□□□□□ -0.44
SPG11-212ENST00000558790 OTOP1Q7RTM1 612 aa12.32□□□□□ -0.44
SPG11-212ENST00000558790 CERS5Q8N5B7 392 aa12.32□□□□□ -0.44
SPG11-212ENST00000558790 PNMA1Q8ND90 353 aa12.32□□□□□ -0.44
SPG11-212ENST00000558790 EMID1Q96A84 441 aaPredicted RBP12.32□□□□□ -0.44
SPG11-212ENST00000558790 MPHOSPH8Q99549 860 aa12.32□□□□□ -0.44
SPG11-212ENST00000558790 ANKRD2Q9GZV1 360 aa12.32□□□□□ -0.44
SPG11-212ENST00000558790 PCDHAC2Q9Y5I4 1007 aa12.32□□□□□ -0.44
SPG11-212ENST00000558790 SNAP23O00161 211 aa12.31□□□□□ -0.44
SPG11-212ENST00000558790 ZBTB24O43167 697 aaPredicted RBP12.31□□□□□ -0.44
SPG11-212ENST00000558790 KCNJ4P48050 445 aa12.31□□□□□ -0.44
SPG11-212ENST00000558790 MMP14P50281 582 aa12.31□□□□□ -0.44
SPG11-212ENST00000558790 COL25A1Q9BXS0 654 aaPredicted RBP12.31□□□□□ -0.44
SPG11-212ENST00000558790 TRIM17Q9Y577 477 aa12.31□□□□□ -0.44
SPG11-212ENST00000558790 AOX1Q06278 1338 aa12.31□□□□□ -0.44
SPG11-212ENST00000558790 CSF1RP07333 972 aa12.3□□□□□ -0.44
SPG11-212ENST00000558790 VAC14Q08AM6 782 aa12.3□□□□□ -0.44
SPG11-212ENST00000558790 FKBP5Q13451 457 aaPredicted RBP12.3□□□□□ -0.44
SPG11-212ENST00000558790 LIAT1Q6ZQX7 453 aa12.3□□□□□ -0.44
SPG11-212ENST00000558790 ARMC2Q8NEN0 867 aa12.3□□□□□ -0.44
SPG11-212ENST00000558790 CLMNQ96JQ2 1002 aa12.3□□□□□ -0.44
SPG11-212ENST00000558790 DEFB129Q9H1M3 183 aa12.3□□□□□ -0.44
SPG11-212ENST00000558790 MYH16Q9H6N6 1097 aa12.3□□□□□ -0.44
SPG11-212ENST00000558790 CD209Q9NNX6 404 aa12.3□□□□□ -0.44
SPG11-212ENST00000558790 POM121CA8CG34 1229 aa12.29□□□□□ -0.44
SPG11-212ENST00000558790 IGF2BP3O00425 579 aaKnown RBP eCLIP12.29□□□□□ -0.44
SPG11-212ENST00000558790 TAF5LO75529 589 aa12.29□□□□□ -0.44
SPG11-212ENST00000558790 TRIM32Q13049 653 aa12.29□□□□□ -0.44
SPG11-212ENST00000558790 DLGAP5Q15398 846 aa12.29□□□□□ -0.44
SPG11-212ENST00000558790 MAP3K11Q16584 847 aa12.29□□□□□ -0.44
SPG11-212ENST00000558790 INTS3Q68E01 1043 aaKnown RBP12.29□□□□□ -0.44
SPG11-212ENST00000558790 WWC1Q8IX03 1113 aa12.29□□□□□ -0.44
SPG11-212ENST00000558790 DNAAF4Q8WXU2 420 aa12.29□□□□□ -0.44
SPG11-212ENST00000558790 WNK4Q96J92 1243 aa12.29□□□□□ -0.44
SPG11-212ENST00000558790 JAG2Q9Y219 1238 aa12.29□□□□□ -0.44
SPG11-212ENST00000558790 FANCIQ9NVI1 1328 aa12.29□□□□□ -0.44
SPG11-212ENST00000558790 CLRN2A0PK11 232 aa12.28□□□□□ -0.44
SPG11-212ENST00000558790 ANKRD18BA2A2Z9 1011 aa12.28□□□□□ -0.44
SPG11-212ENST00000558790 MANSC4A6NHS7 340 aaPredicted RBP12.28□□□□□ -0.44
SPG11-212ENST00000558790 F8W031 263 aaPredicted RBP12.28□□□□□ -0.44
SPG11-212ENST00000558790 ALDH1A1P00352 501 aa12.28□□□□□ -0.44
SPG11-212ENST00000558790 ZBTB48P10074 688 aaPredicted RBP12.28□□□□□ -0.44
SPG11-212ENST00000558790 CCDC27Q2M243 656 aa12.28□□□□□ -0.44
SPG11-212ENST00000558790 CFAP100Q494V2 611 aa12.28□□□□□ -0.44
SPG11-212ENST00000558790 CCDC184Q52MB2 194 aa12.28□□□□□ -0.44
SPG11-212ENST00000558790 C15orf52Q6ZUT6 534 aaKnown RBP12.28□□□□□ -0.44
SPG11-212ENST00000558790 LINS1Q8NG48 757 aa12.28□□□□□ -0.44
SPG11-212ENST00000558790 PRO3102Q9H379 93 aa12.28□□□□□ -0.44
SPG11-212ENST00000558790 PPP2R3BQ9Y5P8 575 aa12.28□□□□□ -0.44
SPG11-212ENST00000558790 AK9Q5TCS8 1911 aa12.27□□□□□ -0.44
SPG11-212ENST00000558790 MUC3AQ02505 3323 aa12.27□□□□□ -0.45
SPG11-212ENST00000558790 FBXO45P0C2W1 286 aa12.27□□□□□ -0.45
SPG11-212ENST00000558790 IL1R1P14778 569 aa12.27□□□□□ -0.45
SPG11-212ENST00000558790 ZNF804AQ7Z570 1209 aa12.27□□□□□ -0.45
SPG11-212ENST00000558790 ZNF511Q8NB15 262 aa12.27□□□□□ -0.45
SPG11-212ENST00000558790 FOXJ1Q92949 421 aa12.27□□□□□ -0.45
SPG11-212ENST00000558790 VEZTQ9HBM0 779 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms