RNA–Protein interactions for RNA: ENST00000558635.1

PSMA4-207, Transcript of proteasome subunit alpha 4, humanhuman

TSL 1 (best)

Gene PSMA4, Length 736 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-207ENST00000558635 DDX4Q9NQI0 724 aaKnown RBP12.51□□□□□ -0.41
PSMA4-207ENST00000558635 PASKQ96RG2 1323 aa12.51□□□□□ -0.41
PSMA4-207ENST00000558635 M0R2C6 588 aa12.5□□□□□ -0.41
PSMA4-207ENST00000558635 ENTPD3O75355 529 aa12.5□□□□□ -0.41
PSMA4-207ENST00000558635 HOXB1P14653 301 aaPredicted RBP12.5□□□□□ -0.41
PSMA4-207ENST00000558635 NMIQ13287 307 aaPredicted RBP12.5□□□□□ -0.41
PSMA4-207ENST00000558635 TGFBRAP1Q8WUH2 860 aa12.5□□□□□ -0.41
PSMA4-207ENST00000558635 FAM151AQ8WW52 585 aa12.5□□□□□ -0.41
PSMA4-207ENST00000558635 AIDAQ96BJ3 306 aa12.5□□□□□ -0.41
PSMA4-207ENST00000558635 CRNKL1Q9BZJ0 848 aaKnown RBP12.5□□□□□ -0.41
PSMA4-207ENST00000558635 PPP2R3BQ9Y5P8 575 aa12.5□□□□□ -0.41
PSMA4-207ENST00000558635 RFX7Q2KHR2 1363 aa12.5□□□□□ -0.41
PSMA4-207ENST00000558635 PRKAB2O43741 272 aa12.49□□□□□ -0.41
PSMA4-207ENST00000558635 USP5P45974 858 aa12.49□□□□□ -0.41
PSMA4-207ENST00000558635 C1QTNF8P60827 252 aa12.49□□□□□ -0.41
PSMA4-207ENST00000558635 BMP2KLQ5H9B9 411 aa12.49□□□□□ -0.41
PSMA4-207ENST00000558635 NBPF12Q5TAG4 269 aaPredicted RBP12.49□□□□□ -0.41
PSMA4-207ENST00000558635 MAPKAPK5Q8IW41 473 aa12.49□□□□□ -0.41
PSMA4-207ENST00000558635 FAM227BQ96M60 508 aa12.49□□□□□ -0.41
PSMA4-207ENST00000558635 TEPSINQ96N21 525 aa12.49□□□□□ -0.41
PSMA4-207ENST00000558635 STRBPQ96SI9 672 aaKnown RBP12.49□□□□□ -0.41
PSMA4-207ENST00000558635 ZNF408Q9H9D4 720 aa12.49□□□□□ -0.41
PSMA4-207ENST00000558635 A0A0D9SFI3 127 aa12.48□□□□□ -0.41
PSMA4-207ENST00000558635 C2orf72A6NCS6 295 aa12.48□□□□□ -0.41
PSMA4-207ENST00000558635 HIP1O00291 1037 aa12.48□□□□□ -0.41
PSMA4-207ENST00000558635 GPAA1O43292 621 aa12.48□□□□□ -0.41
PSMA4-207ENST00000558635 CELF2O95319 508 aaKnown RBP12.48□□□□□ -0.41
PSMA4-207ENST00000558635 CCDC129Q6ZRS4 1044 aa12.48□□□□□ -0.41
PSMA4-207ENST00000558635 SH3BP5LQ7L8J4 393 aa12.48□□□□□ -0.41
PSMA4-207ENST00000558635 OSBPL5Q9H0X9 879 aaPredicted RBP12.48□□□□□ -0.41
PSMA4-207ENST00000558635 HELLSQ9NRZ9 838 aa12.48□□□□□ -0.41
PSMA4-207ENST00000558635 DIAPH3Q9NSV4 1193 aa12.48□□□□□ -0.41
PSMA4-207ENST00000558635 SLC4A4Q9Y6R1 1079 aa12.48□□□□□ -0.41
PSMA4-207ENST00000558635 POLR2AP24928 1970 aaKnown RBP12.48□□□□□ -0.41
PSMA4-207ENST00000558635 ECM29Q5VYK3 1845 aa12.48□□□□□ -0.41
PSMA4-207ENST00000558635 FLT1P17948 1338 aa12.47□□□□□ -0.41
PSMA4-207ENST00000558635 FAM205CA6NFA0 338 aa12.47□□□□□ -0.41
PSMA4-207ENST00000558635 DDTLA6NHG4 134 aaPredicted RBP12.47□□□□□ -0.41
PSMA4-207ENST00000558635 SUPT20HL1Q3ZLR7 823 aa12.47□□□□□ -0.41
PSMA4-207ENST00000558635 MCMDC2Q4G0Z9 681 aa12.47□□□□□ -0.41
PSMA4-207ENST00000558635 CST9Q5W186 159 aa12.47□□□□□ -0.41
PSMA4-207ENST00000558635 CWC27Q6UX04 472 aaKnown RBP12.47□□□□□ -0.41
PSMA4-207ENST00000558635 ZSCAN29Q8IWY8 852 aaPredicted RBP12.47□□□□□ -0.41
PSMA4-207ENST00000558635 SDR42E1Q8WUS8 393 aa12.47□□□□□ -0.41
PSMA4-207ENST00000558635 ZSWIM6Q9HCJ5 1215 aa12.47□□□□□ -0.41
PSMA4-207ENST00000558635 RYDENQ9NUL5 291 aaKnown RBP12.47□□□□□ -0.41
PSMA4-207ENST00000558635 SAP30BPQ9UHR5 308 aaKnown RBP12.47□□□□□ -0.41
PSMA4-207ENST00000558635 CHMLP26374 656 aa12.46□□□□□ -0.41
PSMA4-207ENST00000558635 NF2P35240 595 aa12.46□□□□□ -0.41
PSMA4-207ENST00000558635 APLP1P51693 650 aa12.46□□□□□ -0.41
PSMA4-207ENST00000558635 PRKG1Q13976 671 aa12.46□□□□□ -0.41
PSMA4-207ENST00000558635 TMC2Q8TDI7 906 aa12.46□□□□□ -0.41
PSMA4-207ENST00000558635 DCP1AQ9NPI6 582 aaPredicted RBP12.46□□□□□ -0.41
PSMA4-207ENST00000558635 ATP8A2Q9NTI2 1148 aa12.46□□□□□ -0.41
PSMA4-207ENST00000558635 MKRN1Q9UHC7 482 aaKnown RBP12.46□□□□□ -0.41
PSMA4-207ENST00000558635 PALD1Q9ULE6 856 aa12.46□□□□□ -0.41
PSMA4-207ENST00000558635 MYH7P12883 1935 aa12.46□□□□□ -0.42
PSMA4-207ENST00000558635 RPAP1Q9BWH6 1393 aaPredicted RBP12.45□□□□□ -0.42
PSMA4-207ENST00000558635 GSG1L2A8MUP6 293 aa12.45□□□□□ -0.42
PSMA4-207ENST00000558635 GNAT2P19087 354 aa12.45□□□□□ -0.42
PSMA4-207ENST00000558635 SLC4A8Q2Y0W8 1093 aa12.45□□□□□ -0.42
PSMA4-207ENST00000558635 ZNF589Q86UQ0 364 aaPredicted RBP12.45□□□□□ -0.42
PSMA4-207ENST00000558635 HS3ST6Q96QI5 342 aa12.45□□□□□ -0.42
PSMA4-207ENST00000558635 CSRNP1Q96S65 589 aa12.45□□□□□ -0.42
PSMA4-207ENST00000558635 GBA2Q9HCG7 927 aaPredicted RBP12.45□□□□□ -0.42
PSMA4-207ENST00000558635 MCM9Q9NXL9 1143 aa12.45□□□□□ -0.42
PSMA4-207ENST00000558635 FZD1Q9UP38 647 aa12.45□□□□□ -0.42
PSMA4-207ENST00000558635 ATRNL1Q5VV63 1379 aa12.44□□□□□ -0.42
PSMA4-207ENST00000558635 SSC5DA1L4H1 1573 aa12.44□□□□□ -0.42
PSMA4-207ENST00000558635 TMEM88BA6NKF7 163 aa12.44□□□□□ -0.42
PSMA4-207ENST00000558635 PATL2C9JE40 543 aaKnown RBP12.44□□□□□ -0.42
PSMA4-207ENST00000558635 USP2O75604 605 aaPredicted RBP12.44□□□□□ -0.42
PSMA4-207ENST00000558635 APPP05067 770 aa12.44□□□□□ -0.42
PSMA4-207ENST00000558635 SLURP2P0DP57 97 aa12.44□□□□□ -0.42
PSMA4-207ENST00000558635 TTLL12Q14166 644 aaPredicted RBP12.44□□□□□ -0.42
PSMA4-207ENST00000558635 MOB2Q70IA6 237 aa12.44□□□□□ -0.42
PSMA4-207ENST00000558635 MIGA2Q7L4E1 593 aa12.44□□□□□ -0.42
PSMA4-207ENST00000558635 C2orf69Q8N8R5 385 aa12.44□□□□□ -0.42
PSMA4-207ENST00000558635 HOOK2Q96ED9 719 aa12.44□□□□□ -0.42
PSMA4-207ENST00000558635 DHX36Q9H2U1 1008 aaKnown RBP12.44□□□□□ -0.42
PSMA4-207ENST00000558635 CCDC171Q6TFL3 1326 aa12.43□□□□□ -0.42
PSMA4-207ENST00000558635 COL2A1P02458 1487 aaPredicted RBP12.43□□□□□ -0.42
PSMA4-207ENST00000558635 UBE2Q2LH0YL09 131 aa12.43□□□□□ -0.42
PSMA4-207ENST00000558635 FOXP2O15409 715 aa12.43□□□□□ -0.42
PSMA4-207ENST00000558635 PPP1R12BO60237 982 aaPredicted RBP12.43□□□□□ -0.42
PSMA4-207ENST00000558635 POLR3DP05423 398 aaPredicted RBP12.43□□□□□ -0.42
PSMA4-207ENST00000558635 CYP2D6P10635 497 aa12.43□□□□□ -0.42
PSMA4-207ENST00000558635 MFAP1P55081 439 aaKnown RBP12.43□□□□□ -0.42
PSMA4-207ENST00000558635 VPS53Q5VIR6 699 aa12.43□□□□□ -0.42
PSMA4-207ENST00000558635 DCAF15Q66K64 600 aa12.43□□□□□ -0.42
PSMA4-207ENST00000558635 GIMAP6Q6P9H5 292 aa12.43□□□□□ -0.42
PSMA4-207ENST00000558635 ARMC9Q7Z3E5 817 aa12.43□□□□□ -0.42
PSMA4-207ENST00000558635 IFNL3Q8IZI9 196 aa12.43□□□□□ -0.42
PSMA4-207ENST00000558635 RUFY2Q8WXA3 655 aa12.43□□□□□ -0.42
PSMA4-207ENST00000558635 DDRGK1Q96HY6 314 aa12.43□□□□□ -0.42
PSMA4-207ENST00000558635 IL25Q9H293 177 aa12.43□□□□□ -0.42
PSMA4-207ENST00000558635 EPB41L4AQ9HCS5 686 aaPredicted RBP12.43□□□□□ -0.42
PSMA4-207ENST00000558635 ANGEL1Q9UNK9 670 aaKnown RBP12.43□□□□□ -0.42
PSMA4-207ENST00000558635 CYP2D7A0A087X1C5 515 aa12.42□□□□□ -0.42
PSMA4-207ENST00000558635 USP17L12C9JPN9 530 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms