RNA–Protein interactions for RNA: ENST00000558532.1

HERC1-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-203ENST00000558532 ADAMTS4O75173 837 aa4.81□□□□□ -1.64
HERC1-203ENST00000558532 LEFTY1O75610 366 aa4.81□□□□□ -1.64
HERC1-203ENST00000558532 PF4P02776 101 aa4.81□□□□□ -1.64
HERC1-203ENST00000558532 CENPBP07199 599 aaPredicted RBP4.81□□□□□ -1.64
HERC1-203ENST00000558532 FAM87AP0C7U9 286 aa4.81□□□□□ -1.64
HERC1-203ENST00000558532 FOSL1P15407 271 aa4.81□□□□□ -1.64
HERC1-203ENST00000558532 ITGAEP38570 1179 aa4.81□□□□□ -1.64
HERC1-203ENST00000558532 LMNB2Q03252 620 aa4.81□□□□□ -1.64
HERC1-203ENST00000558532 INTS5Q6P9B9 1019 aaKnown RBP4.81□□□□□ -1.64
HERC1-203ENST00000558532 HDXQ7Z353 690 aa4.81□□□□□ -1.64
HERC1-203ENST00000558532 DTX1Q86Y01 620 aa4.81□□□□□ -1.64
HERC1-203ENST00000558532 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.81□□□□□ -1.64
HERC1-203ENST00000558532 TMEM74Q96NL1 305 aa4.81□□□□□ -1.64
HERC1-203ENST00000558532 RSRP1Q9BUV0 290 aa4.81□□□□□ -1.64
HERC1-203ENST00000558532 DUSP23Q9BVJ7 150 aa4.81□□□□□ -1.64
HERC1-203ENST00000558532 COPRSQ9NQ92 184 aa4.81□□□□□ -1.64
HERC1-203ENST00000558532 LEMD3Q9Y2U8 911 aa4.81□□□□□ -1.64
HERC1-203ENST00000558532 U3KQE9 123 aa4.81□□□□□ -1.64
HERC1-203ENST00000558532 FAM221AA4D161 298 aa4.8□□□□□ -1.64
HERC1-203ENST00000558532 LMNB1P20700 586 aa4.8□□□□□ -1.64
HERC1-203ENST00000558532 GARTP22102 1010 aa4.8□□□□□ -1.64
HERC1-203ENST00000558532 GRIK1P39086 918 aa4.8□□□□□ -1.64
HERC1-203ENST00000558532 CYP27A1Q02318 531 aa4.8□□□□□ -1.64
HERC1-203ENST00000558532 RPL6Q02878 288 aaKnown RBP4.8□□□□□ -1.64
HERC1-203ENST00000558532 CAMK2GQ13555 558 aaPredicted RBP4.8□□□□□ -1.64
HERC1-203ENST00000558532 SLBPQ14493 270 aaKnown RBP eCLIP4.8□□□□□ -1.64
HERC1-203ENST00000558532 NKG7Q16617 165 aa4.8□□□□□ -1.64
HERC1-203ENST00000558532 TSNAXIP1Q2TAA8 658 aa4.8□□□□□ -1.64
HERC1-203ENST00000558532 BNC2Q6ZN30 1099 aaPredicted RBP4.8□□□□□ -1.64
HERC1-203ENST00000558532 CCDC84Q86UT8 332 aaPredicted RBP4.8□□□□□ -1.64
HERC1-203ENST00000558532 RGS22Q8NE09 1264 aa4.8□□□□□ -1.64
HERC1-203ENST00000558532 WNT10AQ9GZT5 417 aa4.8□□□□□ -1.64
HERC1-203ENST00000558532 SSU72Q9NP77 194 aaKnown RBP4.8□□□□□ -1.64
HERC1-203ENST00000558532 PICK1Q9NRD5 415 aa4.8□□□□□ -1.64
HERC1-203ENST00000558532 PCMTD2Q9NV79 361 aa4.8□□□□□ -1.64
HERC1-203ENST00000558532 KBTBD4Q9NVX7 518 aa4.8□□□□□ -1.64
HERC1-203ENST00000558532 CYP26A1O43174 497 aa4.79□□□□□ -1.64
HERC1-203ENST00000558532 CILPO75339 1184 aa4.79□□□□□ -1.64
HERC1-203ENST00000558532 RECKO95980 971 aa4.79□□□□□ -1.64
HERC1-203ENST00000558532 F13A1P00488 732 aa4.79□□□□□ -1.64
HERC1-203ENST00000558532 GRK4P32298 578 aa4.79□□□□□ -1.64
HERC1-203ENST00000558532 GBP2P32456 591 aaPredicted RBP4.79□□□□□ -1.64
HERC1-203ENST00000558532 CAP2P40123 477 aa4.79□□□□□ -1.64
HERC1-203ENST00000558532 FAM160A1Q05DH4 1040 aa4.79□□□□□ -1.64
HERC1-203ENST00000558532 NFXL1Q6ZNB6 911 aa4.79□□□□□ -1.64
HERC1-203ENST00000558532 ARMCX6Q7L4S7 300 aa4.79□□□□□ -1.64
HERC1-203ENST00000558532 TOP6BLQ8N6T0 577 aa4.79□□□□□ -1.64
HERC1-203ENST00000558532 ZNF507Q8TCN5 953 aa4.79□□□□□ -1.64
HERC1-203ENST00000558532 GATAD2BQ8WXI9 593 aa4.79□□□□□ -1.64
HERC1-203ENST00000558532 JARID2Q92833 1246 aaPredicted RBP4.79□□□□□ -1.64
HERC1-203ENST00000558532 LRRC4CQ9HCJ2 640 aa4.79□□□□□ -1.64
HERC1-203ENST00000558532 KCNQ5Q9NR82 932 aa4.79□□□□□ -1.64
HERC1-203ENST00000558532 ZC3H7BQ9UGR2 993 aaKnown RBP4.79□□□□□ -1.64
HERC1-203ENST00000558532 TACC3Q9Y6A5 838 aa4.79□□□□□ -1.64
HERC1-203ENST00000558532 LOC105371045A0A1W2PR82 267 aa4.78□□□□□ -1.64
HERC1-203ENST00000558532 ETF1P62495 437 aaKnown RBP4.78□□□□□ -1.64
HERC1-203ENST00000558532 PWP1Q13610 501 aa4.78□□□□□ -1.64
HERC1-203ENST00000558532 DUSP27Q5VZP5 1158 aa4.78□□□□□ -1.64
HERC1-203ENST00000558532 FAM214BQ7L5A3 538 aa4.78□□□□□ -1.64
HERC1-203ENST00000558532 RELL1Q8IUW5 271 aa4.78□□□□□ -1.64
HERC1-203ENST00000558532 KCT2Q8NC54 265 aa4.78□□□□□ -1.64
HERC1-203ENST00000558532 BACH2Q9BYV9 841 aa4.78□□□□□ -1.64
HERC1-203ENST00000558532 PRDM10Q9NQV6 1147 aa4.78□□□□□ -1.64
HERC1-203ENST00000558532 CLSPNQ9HAW4 1339 aa4.77□□□□□ -1.65
HERC1-203ENST00000558532 MINDY4BA8MYZ0 360 aa4.77□□□□□ -1.65
HERC1-203ENST00000558532 LRIG2O94898 1065 aa4.77□□□□□ -1.65
HERC1-203ENST00000558532 EOMESO95936 686 aa4.77□□□□□ -1.65
HERC1-203ENST00000558532 PRNPP04156 253 aa4.77□□□□□ -1.65
HERC1-203ENST00000558532 FANCCQ00597 558 aa4.77□□□□□ -1.65
HERC1-203ENST00000558532 CYP27C1Q4G0S4 372 aa4.77□□□□□ -1.65
HERC1-203ENST00000558532 FBXL19Q6PCT2 694 aa4.77□□□□□ -1.65
HERC1-203ENST00000558532 CDC37L1Q7L3B6 337 aa4.77□□□□□ -1.65
HERC1-203ENST00000558532 HS2ST1Q7LGA3 356 aa4.77□□□□□ -1.65
HERC1-203ENST00000558532 WFDC3Q8IUB2 231 aa4.77□□□□□ -1.65
HERC1-203ENST00000558532 HID1Q8IV36 788 aa4.77□□□□□ -1.65
HERC1-203ENST00000558532 FAM181AQ8N9Y4 354 aa4.77□□□□□ -1.65
HERC1-203ENST00000558532 GOLM1Q8NBJ4 401 aa4.77□□□□□ -1.65
HERC1-203ENST00000558532 TMEM87AQ8NBN3 555 aa4.77□□□□□ -1.65
HERC1-203ENST00000558532 FBXO27Q8NI29 283 aa4.77□□□□□ -1.65
HERC1-203ENST00000558532 HEXIM2Q96MH2 286 aaKnown RBP4.77□□□□□ -1.65
HERC1-203ENST00000558532 TJP2Q9UDY2 1190 aa4.77□□□□□ -1.65
HERC1-203ENST00000558532 ADAMTS1Q9UHI8 967 aa4.77□□□□□ -1.65
HERC1-203ENST00000558532 POLR3KQ9Y2Y1 108 aaPredicted RBP4.77□□□□□ -1.65
HERC1-203ENST00000558532 CORINQ9Y5Q5 1042 aa4.77□□□□□ -1.65
HERC1-203ENST00000558532 UNCXA6NJT0 531 aa4.76□□□□□ -1.65
HERC1-203ENST00000558532 RBAK-RBAKDNI3L0D1 243 aa4.76□□□□□ -1.65
HERC1-203ENST00000558532 SLITRK5O94991 958 aa4.76□□□□□ -1.65
HERC1-203ENST00000558532 PGRP06401 933 aa4.76□□□□□ -1.65
HERC1-203ENST00000558532 VAMP1P23763 118 aa4.76□□□□□ -1.65
HERC1-203ENST00000558532 OXCT1P55809 520 aa4.76□□□□□ -1.65
HERC1-203ENST00000558532 SNAP47Q5SQN1 464 aa4.76□□□□□ -1.65
HERC1-203ENST00000558532 PRAMEF13Q5VWM6 474 aa4.76□□□□□ -1.65
HERC1-203ENST00000558532 FAM196AQ6ZSG2 479 aa4.76□□□□□ -1.65
HERC1-203ENST00000558532 MRPL41Q8IXM3 137 aaKnown RBP4.76□□□□□ -1.65
HERC1-203ENST00000558532 PLD6Q8N2A8 252 aaKnown RBP4.76□□□□□ -1.65
HERC1-203ENST00000558532 ACSF2Q96CM8 615 aaPredicted RBP4.76□□□□□ -1.65
HERC1-203ENST00000558532 FOXQ1Q9C009 403 aa4.76□□□□□ -1.65
HERC1-203ENST00000558532 BCL11AQ9H165 835 aa4.76□□□□□ -1.65
HERC1-203ENST00000558532 CCDC39Q9UFE4 941 aa4.76□□□□□ -1.65
HERC1-203ENST00000558532 GGT7Q9UJ14 662 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms