RNA–Protein interactions for RNA: ENST00000558324.1

HERC1-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 828 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-202ENST00000558324 CXCL11O14625 94 aa14.53□□□□□ -0.08
HERC1-202ENST00000558324 IFIT2P09913 472 aaKnown RBP14.53□□□□□ -0.08
HERC1-202ENST00000558324 PPP4CP60510 307 aa14.53□□□□□ -0.08
HERC1-202ENST00000558324 AFG3L2Q9Y4W6 797 aa14.53□□□□□ -0.08
HERC1-202ENST00000558324 A0A0G2JLL6 359 aaPredicted RBP14.52□□□□□ -0.09
HERC1-202ENST00000558324 TBC1D12O60347 775 aa14.52□□□□□ -0.09
HERC1-202ENST00000558324 CYP2C8P10632 490 aa14.52□□□□□ -0.09
HERC1-202ENST00000558324 LACTBP83111 547 aaPredicted RBP14.52□□□□□ -0.09
HERC1-202ENST00000558324 MAP3K12Q12852 859 aa14.52□□□□□ -0.09
HERC1-202ENST00000558324 PDE3AQ14432 1141 aa14.52□□□□□ -0.09
HERC1-202ENST00000558324 KIF22Q14807 665 aa14.52□□□□□ -0.09
HERC1-202ENST00000558324 GPAT2Q6NUI2 795 aa14.52□□□□□ -0.09
HERC1-202ENST00000558324 PRRT2Q7Z6L0 340 aaPredicted RBP14.52□□□□□ -0.09
HERC1-202ENST00000558324 PARK7Q99497 189 aaKnown RBP14.52□□□□□ -0.09
HERC1-202ENST00000558324 DNAJC2Q99543 621 aaKnown RBP14.52□□□□□ -0.09
HERC1-202ENST00000558324 PALD1Q9ULE6 856 aa14.52□□□□□ -0.09
HERC1-202ENST00000558324 RRP1BQ14684 758 aaKnown RBP14.51□□□□□ -0.09
HERC1-202ENST00000558324 ARHGEF6Q15052 776 aa14.51□□□□□ -0.09
HERC1-202ENST00000558324 C17orf99Q6UX52 265 aa14.51□□□□□ -0.09
HERC1-202ENST00000558324 FASTKD5Q7L8L6 764 aaKnown RBP14.51□□□□□ -0.09
HERC1-202ENST00000558324 CRACR2BQ8N4Y2 399 aaPredicted RBP14.51□□□□□ -0.09
HERC1-202ENST00000558324 TRIM34Q9BYJ4 488 aa14.51□□□□□ -0.09
HERC1-202ENST00000558324 DHX36Q9H2U1 1008 aaKnown RBP14.51□□□□□ -0.09
HERC1-202ENST00000558324 PI4KBQ9UBF8 816 aa14.51□□□□□ -0.09
HERC1-202ENST00000558324 HERC5Q9UII4 1024 aaKnown RBP14.51□□□□□ -0.09
HERC1-202ENST00000558324 PTCH2Q9Y6C5 1203 aa14.51□□□□□ -0.09
HERC1-202ENST00000558324 SIPA1L1O43166 1804 aa14.5□□□□□ -0.09
HERC1-202ENST00000558324 ADGRA2Q96PE1 1338 aa14.5□□□□□ -0.09
HERC1-202ENST00000558324 GOLIM4O00461 696 aa14.5□□□□□ -0.09
HERC1-202ENST00000558324 RAB11FIP3O75154 756 aa14.5□□□□□ -0.09
HERC1-202ENST00000558324 CAP2P40123 477 aa14.5□□□□□ -0.09
HERC1-202ENST00000558324 USP5P45974 858 aa14.5□□□□□ -0.09
HERC1-202ENST00000558324 EDC3Q96F86 508 aaKnown RBP14.5□□□□□ -0.09
HERC1-202ENST00000558324 DNAJC18Q9H819 358 aa14.5□□□□□ -0.09
HERC1-202ENST00000558324 CDK5RAP2Q96SN8 1893 aa14.49□□□□□ -0.09
HERC1-202ENST00000558324 IGSF3O75054 1194 aa14.49□□□□□ -0.09
HERC1-202ENST00000558324 MYCP01106 439 aaPredicted RBP14.49□□□□□ -0.09
HERC1-202ENST00000558324 HLA-DOAP06340 250 aa14.49□□□□□ -0.09
HERC1-202ENST00000558324 SPP2Q13103 211 aa14.49□□□□□ -0.09
HERC1-202ENST00000558324 SLC9C1Q4G0N8 1177 aa14.49□□□□□ -0.09
HERC1-202ENST00000558324 FOCADQ5VW36 1801 aa14.48□□□□□ -0.09
HERC1-202ENST00000558324 PHIPQ8WWQ0 1821 aa14.48□□□□□ -0.09
HERC1-202ENST00000558324 SMARCA5O60264 1052 aaPredicted RBP14.48□□□□□ -0.09
HERC1-202ENST00000558324 GDF11O95390 407 aa14.48□□□□□ -0.09
HERC1-202ENST00000558324 FMNL1O95466 1100 aaPredicted RBP14.48□□□□□ -0.09
HERC1-202ENST00000558324 PDE6AP16499 860 aa14.48□□□□□ -0.09
HERC1-202ENST00000558324 CTGFP29279 349 aa14.48□□□□□ -0.09
HERC1-202ENST00000558324 PSMC4P43686 418 aa14.48□□□□□ -0.09
HERC1-202ENST00000558324 TTF1Q15361 905 aaPredicted RBP14.48□□□□□ -0.09
HERC1-202ENST00000558324 SHROOM1Q2M3G4 852 aaPredicted RBP14.48□□□□□ -0.09
HERC1-202ENST00000558324 TREML2Q5T2D2 321 aa14.48□□□□□ -0.09
HERC1-202ENST00000558324 SLC9C2Q5TAH2 1124 aa14.48□□□□□ -0.09
HERC1-202ENST00000558324 ZNF280CQ8ND82 737 aa14.48□□□□□ -0.09
HERC1-202ENST00000558324 SMCR8Q8TEV9 937 aaPredicted RBP14.48□□□□□ -0.09
HERC1-202ENST00000558324 YTHDC1Q96MU7 727 aaKnown RBP14.48□□□□□ -0.09
HERC1-202ENST00000558324 HTTP42858 3142 aa14.48□□□□□ -0.09
HERC1-202ENST00000558324 ATAD5Q96QE3 1844 aa14.48□□□□□ -0.09
HERC1-202ENST00000558324 MAGEB6P1A0A0J9YX57 407 aa14.47□□□□□ -0.09
HERC1-202ENST00000558324 POTEFA5A3E0 1075 aa14.47□□□□□ -0.09
HERC1-202ENST00000558324 USP17L5A8MUK1 530 aa14.47□□□□□ -0.09
HERC1-202ENST00000558324 HMGCS2P54868 508 aa14.47□□□□□ -0.09
HERC1-202ENST00000558324 JAG1P78504 1218 aa14.47□□□□□ -0.09
HERC1-202ENST00000558324 FOXP4Q8IVH2 680 aaPredicted RBP14.47□□□□□ -0.09
HERC1-202ENST00000558324 SH3TC2Q8TF17 1288 aa14.47□□□□□ -0.09
HERC1-202ENST00000558324 ARMC5Q96C12 935 aa14.47□□□□□ -0.09
HERC1-202ENST00000558324 TRIM47Q96LD4 638 aa14.47□□□□□ -0.09
HERC1-202ENST00000558324 LRRCC1Q9C099 1032 aa14.47□□□□□ -0.09
HERC1-202ENST00000558324 BOLA2Q9H3K6 86 aa14.47□□□□□ -0.09
HERC1-202ENST00000558324 AS3MTQ9HBK9 375 aa14.47□□□□□ -0.09
HERC1-202ENST00000558324 AGTPBP1Q9UPW5 1226 aa14.47□□□□□ -0.09
HERC1-202ENST00000558324 PTPRFP10586 1907 aa14.47□□□□□ -0.09
HERC1-202ENST00000558324 ZNF532Q9HCE3 1301 aa14.46□□□□□ -0.09
HERC1-202ENST00000558324 BCRP11274 1271 aa14.46□□□□□ -0.09
HERC1-202ENST00000558324 MTMR2Q13614 643 aa14.46□□□□□ -0.09
HERC1-202ENST00000558324 CERS3Q8IU89 383 aa14.46□□□□□ -0.09
HERC1-202ENST00000558324 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.46□□□□□ -0.09
HERC1-202ENST00000558324 RIOK1Q9BRS2 568 aaKnown RBP14.46□□□□□ -0.09
HERC1-202ENST00000558324 PAG1Q9NWQ8 432 aa14.46□□□□□ -0.09
HERC1-202ENST00000558324 ASNSP08243 561 aa14.45□□□□□ -0.1
HERC1-202ENST00000558324 OSBPP22059 807 aa14.45□□□□□ -0.1
HERC1-202ENST00000558324 SLFNL1Q499Z3 407 aa14.45□□□□□ -0.1
HERC1-202ENST00000558324 METTL16Q86W50 562 aaKnown RBP14.45□□□□□ -0.1
HERC1-202ENST00000558324 PROCA1Q8NCQ7 364 aaPredicted RBP14.45□□□□□ -0.1
HERC1-202ENST00000558324 ZNF333Q96JL9 665 aa14.45□□□□□ -0.1
HERC1-202ENST00000558324 SRRDQ9UH36 339 aa14.45□□□□□ -0.1
HERC1-202ENST00000558324 ZBTB21Q9ULJ3 1066 aa14.45□□□□□ -0.1
HERC1-202ENST00000558324 SLC45A1Q9Y2W3 748 aa14.45□□□□□ -0.1
HERC1-202ENST00000558324 MYPNQ86TC9 1320 aa14.44□□□□□ -0.1
HERC1-202ENST00000558324 GNRH1P01148 92 aa14.44□□□□□ -0.1
HERC1-202ENST00000558324 ATP5JP18859 108 aa14.44□□□□□ -0.1
HERC1-202ENST00000558324 FCGRTP55899 365 aa14.44□□□□□ -0.1
HERC1-202ENST00000558324 TMED8Q6PL24 325 aaPredicted RBP14.44□□□□□ -0.1
HERC1-202ENST00000558324 NBPF11Q86T75 865 aa14.44□□□□□ -0.1
HERC1-202ENST00000558324 LCORLQ8N3X6 602 aa14.44□□□□□ -0.1
HERC1-202ENST00000558324 ANKRD13CQ8N6S4 541 aa14.44□□□□□ -0.1
HERC1-202ENST00000558324 RAET1EQ8TD07 263 aa14.44□□□□□ -0.1
HERC1-202ENST00000558324 TBC1D2Q9BYX2 928 aa14.44□□□□□ -0.1
HERC1-202ENST00000558324 CRNKL1Q9BZJ0 848 aaKnown RBP14.44□□□□□ -0.1
HERC1-202ENST00000558324 SERPINB13Q9UIV8 391 aa14.44□□□□□ -0.1
HERC1-202ENST00000558324 PNMA3Q9UL41 463 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms