RNA–Protein interactions for RNA: ENST00000558193.5

IPO4-204, Transcript of importin 4, humanhuman

TSL 4

Gene IPO4, Length 555 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IPO4-204ENST00000558193 TBC1D9Q6ZT07 1266 aa24.43■■□□□ 1.5
IPO4-204ENST00000558193 LRCH3Q96II8 777 aa24.43■■□□□ 1.5
IPO4-204ENST00000558193 NEUROD6Q96NK8 337 aa24.43■■□□□ 1.5
IPO4-204ENST00000558193 XRN2Q9H0D6 950 aaKnown RBP eCLIP24.43■■□□□ 1.55e-8■■■□□ 18
IPO4-204ENST00000558193 LOC285556D6RIA3 1793 aa24.42■■□□□ 1.5
IPO4-204ENST00000558193 PDS5AQ29RF7 1337 aaKnown RBP24.42■■□□□ 1.5
IPO4-204ENST00000558193 SRGAP3O43295 1099 aa24.41■■□□□ 1.5
IPO4-204ENST00000558193 TRIM32Q13049 653 aa24.41■■□□□ 1.5
IPO4-204ENST00000558193 RRP1BQ14684 758 aaKnown RBP24.41■■□□□ 1.5
IPO4-204ENST00000558193 MVPQ14764 893 aaKnown RBP24.41■■□□□ 1.5
IPO4-204ENST00000558193 API5Q9BZZ5 524 aaKnown RBP24.41■■□□□ 1.5
IPO4-204ENST00000558193 CRISPLD2Q9H0B8 497 aa24.41■■□□□ 1.5
IPO4-204ENST00000558193 HMG20BQ9P0W2 317 aa24.41■■□□□ 1.5
IPO4-204ENST00000558193 CUL9Q8IWT3 2517 aa24.41■■□□□ 1.5
IPO4-204ENST00000558193 NECAB2Q7Z6G3 386 aa24.4■■□□□ 1.5
IPO4-204ENST00000558193 C7orf61Q8IZ16 206 aa24.4■■□□□ 1.5
IPO4-204ENST00000558193 PROCA1Q8NCQ7 364 aaPredicted RBP24.4■■□□□ 1.5
IPO4-204ENST00000558193 ZNF280CQ8ND82 737 aa24.4■■□□□ 1.5
IPO4-204ENST00000558193 RAI14Q9P0K7 980 aa24.4■■□□□ 1.5
IPO4-204ENST00000558193 HDAC5Q9UQL6 1122 aa24.4■■□□□ 1.5
IPO4-204ENST00000558193 ZBTB22O15209 634 aa24.39■■□□□ 1.49
IPO4-204ENST00000558193 TBC1D12O60347 775 aa24.39■■□□□ 1.49
IPO4-204ENST00000558193 SLC17A8Q8NDX2 589 aa24.39■■□□□ 1.49
IPO4-204ENST00000558193 OSBPL5Q9H0X9 879 aaPredicted RBP24.39■■□□□ 1.49
IPO4-204ENST00000558193 ASCC2Q9H1I8 757 aaPredicted RBP24.39■■□□□ 1.49
IPO4-204ENST00000558193 ZMYND8Q9ULU4 1186 aaPredicted RBP24.39■■□□□ 1.49
IPO4-204ENST00000558193 AKAP2Q9Y2D5 859 aa24.39■■□□□ 1.49
IPO4-204ENST00000558193 HMGCRP04035 888 aa24.38■■□□□ 1.49
IPO4-204ENST00000558193 GORABQ5T7V8 394 aa24.38■■□□□ 1.49
IPO4-204ENST00000558193 SPATA5Q8NB90 893 aa24.38■■□□□ 1.49
IPO4-204ENST00000558193 NSUN4Q96CB9 384 aaKnown RBP24.38■■□□□ 1.49
IPO4-204ENST00000558193 PEX10O60683 326 aa24.37■■□□□ 1.49
IPO4-204ENST00000558193 GCLCP48506 637 aaPredicted RBP24.37■■□□□ 1.49
IPO4-204ENST00000558193 TEX11Q8IYF3 940 aa24.37■■□□□ 1.49
IPO4-204ENST00000558193 A0A1W2PPC1 479 aa24.36■■□□□ 1.49
IPO4-204ENST00000558193 LDHCP07864 332 aa24.36■■□□□ 1.49
IPO4-204ENST00000558193 CAP2P40123 477 aa24.36■■□□□ 1.49
IPO4-204ENST00000558193 GSTO1P78417 241 aa24.36■■□□□ 1.49
IPO4-204ENST00000558193 PABPC4Q13310 644 aaKnown RBP eCLIP24.36■■□□□ 1.49
IPO4-204ENST00000558193 USP17L5A8MUK1 530 aa24.35■■□□□ 1.49
IPO4-204ENST00000558193 NPM3O75607 178 aaKnown RBP24.35■■□□□ 1.49
IPO4-204ENST00000558193 SH3RF3Q8TEJ3 882 aaPredicted RBP24.35■■□□□ 1.49
IPO4-204ENST00000558193 GJD2Q9UKL4 321 aa24.35■■□□□ 1.49
IPO4-204ENST00000558193 DDX60LQ5H9U9 1706 aaKnown RBP24.35■■□□□ 1.49
IPO4-204ENST00000558193 COL2A1P02458 1487 aaPredicted RBP24.34■■□□□ 1.49
IPO4-204ENST00000558193 PLXNB2O15031 1838 aa24.34■■□□□ 1.49
IPO4-204ENST00000558193 SYN1P17600 705 aa24.34■■□□□ 1.49
IPO4-204ENST00000558193 CYP2B6P20813 491 aa24.34■■□□□ 1.49
IPO4-204ENST00000558193 MTMR2Q13614 643 aa24.34■■□□□ 1.49
IPO4-204ENST00000558193 TRMT2AQ8IZ69 625 aaKnown RBP24.34■■□□□ 1.49
IPO4-204ENST00000558193 HMX1Q9NP08 348 aaPredicted RBP24.34■■□□□ 1.49
IPO4-204ENST00000558193 RPTORQ8N122 1335 aa24.34■■□□□ 1.49
IPO4-204ENST00000558193 SIPA1L1O43166 1804 aa24.33■■□□□ 1.49
IPO4-204ENST00000558193 DLL1O00548 723 aa24.33■■□□□ 1.49
IPO4-204ENST00000558193 SHROOM1Q2M3G4 852 aaPredicted RBP24.33■■□□□ 1.49
IPO4-204ENST00000558193 TRIB2Q92519 343 aa24.33■■□□□ 1.49
IPO4-204ENST00000558193 LRP2BPQ9P2M1 347 aa24.33■■□□□ 1.49
IPO4-204ENST00000558193 GNAI3P08754 354 aa24.32■■□□□ 1.48
IPO4-204ENST00000558193 CAPN2P17655 700 aa24.32■■□□□ 1.48
IPO4-204ENST00000558193 MCAMP43121 646 aa24.32■■□□□ 1.48
IPO4-204ENST00000558193 IRX3P78415 501 aaPredicted RBP24.32■■□□□ 1.48
IPO4-204ENST00000558193 NBPF3Q9H094 633 aa24.32■■□□□ 1.48
IPO4-204ENST00000558193 AS3MTQ9HBK9 375 aa24.32■■□□□ 1.48
IPO4-204ENST00000558193 SNRKQ9NRH2 765 aa24.32■■□□□ 1.48
IPO4-204ENST00000558193 AATFQ9NY61 560 aaKnown RBP eCLIP24.32■■□□□ 1.48
IPO4-204ENST00000558193 ARID4AP29374 1257 aaPredicted RBP24.31■■□□□ 1.48
IPO4-204ENST00000558193 JAG1P78504 1218 aa24.31■■□□□ 1.48
IPO4-204ENST00000558193 SH3D19Q5HYK7 790 aa24.31■■□□□ 1.48
IPO4-204ENST00000558193 ANKLE1Q8NAG6 615 aa24.31■■□□□ 1.48
IPO4-204ENST00000558193 GDF15Q99988 308 aa24.31■■□□□ 1.48
IPO4-204ENST00000558193 NOL10Q9BSC4 688 aaKnown RBP24.31■■□□□ 1.48
IPO4-204ENST00000558193 TBC1D2Q9BYX2 928 aa24.31■■□□□ 1.48
IPO4-204ENST00000558193 HERC5Q9UII4 1024 aaKnown RBP24.31■■□□□ 1.48
IPO4-204ENST00000558193 CT47B1P0C2W7 299 aaPredicted RBP24.3■■□□□ 1.48
IPO4-204ENST00000558193 MNX1P50219 401 aaPredicted RBP24.3■■□□□ 1.48
IPO4-204ENST00000558193 MTX1Q13505 466 aa24.3■■□□□ 1.48
IPO4-204ENST00000558193 MAPKAPK5Q8IW41 473 aa24.3■■□□□ 1.48
IPO4-204ENST00000558193 P2RX7Q99572 595 aaKnown RBP24.3■■□□□ 1.48
IPO4-204ENST00000558193 C11orf49Q9H6J7 331 aa24.3■■□□□ 1.48
IPO4-204ENST00000558193 TMOD4Q9NZQ9 345 aa24.3■■□□□ 1.48
IPO4-204ENST00000558193 MORF4L1Q9UBU8 362 aa24.3■■□□□ 1.48
IPO4-204ENST00000558193 TNNQ9UQP3 1299 aa24.3■■□□□ 1.48
IPO4-204ENST00000558193 GDF11O95390 407 aa24.29■■□□□ 1.48
IPO4-204ENST00000558193 MAP4K4O95819 1239 aaPredicted RBP24.29■■□□□ 1.48
IPO4-204ENST00000558193 PRKAR2AP13861 404 aaKnown RBP24.29■■□□□ 1.48
IPO4-204ENST00000558193 RARSP54136 660 aaKnown RBP24.29■■□□□ 1.48
IPO4-204ENST00000558193 TXNRD2Q9NNW7 524 aa24.29■■□□□ 1.48
IPO4-204ENST00000558193 PI4KBQ9UBF8 816 aa24.29■■□□□ 1.48
IPO4-204ENST00000558193 PNMA6EA0A0J9YXQ4 647 aa24.28■■□□□ 1.48
IPO4-204ENST00000558193 MAGEA10P43363 369 aaPredicted RBP24.28■■□□□ 1.48
IPO4-204ENST00000558193 BACE1P56817 501 aa24.28■■□□□ 1.48
IPO4-204ENST00000558193 Q7L0L9 218 aa24.28■■□□□ 1.48
IPO4-204ENST00000558193 TGFBRAP1Q8WUH2 860 aa24.28■■□□□ 1.48
IPO4-204ENST00000558193 DNAJC18Q9H819 358 aa24.28■■□□□ 1.48
IPO4-204ENST00000558193 HERVK_113P62684 666 aa24.27■■□□□ 1.48
IPO4-204ENST00000558193 G3BP1Q13283 466 aaKnown RBP eCLIP24.27■■□□□ 1.481e-6■■■□□ 16.1
IPO4-204ENST00000558193 NAA16Q6N069 864 aaPredicted RBP24.27■■□□□ 1.48
IPO4-204ENST00000558193 CRACR2BQ8N4Y2 399 aaPredicted RBP24.27■■□□□ 1.48
IPO4-204ENST00000558193 WDR18Q9BV38 432 aa24.27■■□□□ 1.48
IPO4-204ENST00000558193 TRIM34Q9BYJ4 488 aa24.27■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms