RNA–Protein interactions for RNA: ENST00000558020.1

SNRPA1-204, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 3

Gene SNRPA1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-204ENST00000558020 GRK4P32298 578 aa16.65■□□□□ 0.26
SNRPA1-204ENST00000558020 PPP4CP60510 307 aa16.65■□□□□ 0.26
SNRPA1-204ENST00000558020 CERS3Q8IU89 383 aa16.65■□□□□ 0.26
SNRPA1-204ENST00000558020 ERC1Q8IUD2 1116 aa16.65■□□□□ 0.26
SNRPA1-204ENST00000558020 FOXP4Q8IVH2 680 aaPredicted RBP16.65■□□□□ 0.26
SNRPA1-204ENST00000558020 ZNF280CQ8ND82 737 aa16.65■□□□□ 0.26
SNRPA1-204ENST00000558020 NKX2-3Q8TAU0 364 aa16.65■□□□□ 0.26
SNRPA1-204ENST00000558020 TRIM34Q9BYJ4 488 aa16.65■□□□□ 0.26
SNRPA1-204ENST00000558020 AGTPBP1Q9UPW5 1226 aa16.65■□□□□ 0.26
SNRPA1-204ENST00000558020 COL2A1P02458 1487 aaPredicted RBP16.65■□□□□ 0.26
SNRPA1-204ENST00000558020 MYPNQ86TC9 1320 aa16.65■□□□□ 0.26
SNRPA1-204ENST00000558020 CAP2P40123 477 aa16.64■□□□□ 0.25
SNRPA1-204ENST00000558020 UBXN2AP68543 259 aa16.64■□□□□ 0.25
SNRPA1-204ENST00000558020 SPP2Q13103 211 aa16.64■□□□□ 0.25
SNRPA1-204ENST00000558020 PROCA1Q8NCQ7 364 aaPredicted RBP16.64■□□□□ 0.25
SNRPA1-204ENST00000558020 SH3RF3Q8TEJ3 882 aaPredicted RBP16.64■□□□□ 0.25
SNRPA1-204ENST00000558020 C1orf115Q9H7X2 142 aa16.64■□□□□ 0.25
SNRPA1-204ENST00000558020 AS3MTQ9HBK9 375 aa16.64■□□□□ 0.25
SNRPA1-204ENST00000558020 AATFQ9NY61 560 aaKnown RBP eCLIP16.64■□□□□ 0.25
SNRPA1-204ENST00000558020 USP17L5A8MUK1 530 aa16.63■□□□□ 0.25
SNRPA1-204ENST00000558020 CYP2E1P05181 493 aaPredicted RBP16.63■□□□□ 0.25
SNRPA1-204ENST00000558020 HSP90AB4PQ58FF6 505 aa16.63■□□□□ 0.25
SNRPA1-204ENST00000558020 TMED8Q6PL24 325 aaPredicted RBP16.63■□□□□ 0.25
SNRPA1-204ENST00000558020 CRACR2BQ8N4Y2 399 aaPredicted RBP16.63■□□□□ 0.25
SNRPA1-204ENST00000558020 ZBED9Q6R2W3 1325 aa16.63■□□□□ 0.25
SNRPA1-204ENST00000558020 FAM196BA6NMK8 535 aa16.62■□□□□ 0.25
SNRPA1-204ENST00000558020 ASNSP08243 561 aa16.62■□□□□ 0.25
SNRPA1-204ENST00000558020 RLBP1P12271 317 aa16.62■□□□□ 0.25
SNRPA1-204ENST00000558020 CTGFP29279 349 aa16.62■□□□□ 0.25
SNRPA1-204ENST00000558020 SLAIN1Q8ND83 568 aa16.62■□□□□ 0.25
SNRPA1-204ENST00000558020 TGFBRAP1Q8WUH2 860 aa16.62■□□□□ 0.25
SNRPA1-204ENST00000558020 GINM1Q9NU53 330 aa16.62■□□□□ 0.25
SNRPA1-204ENST00000558020 DOCK1Q14185 1865 aa16.61■□□□□ 0.25
SNRPA1-204ENST00000558020 TNPO2O14787 897 aaKnown RBP16.61■□□□□ 0.25
SNRPA1-204ENST00000558020 HLA-DOAP06340 250 aa16.61■□□□□ 0.25
SNRPA1-204ENST00000558020 SLURP2P0DP57 97 aa16.61■□□□□ 0.25
SNRPA1-204ENST00000558020 ZAP70P43403 619 aa16.61■□□□□ 0.25
SNRPA1-204ENST00000558020 GCLCP48506 637 aaPredicted RBP16.61■□□□□ 0.25
SNRPA1-204ENST00000558020 COA7Q96BR5 231 aa16.61■□□□□ 0.25
SNRPA1-204ENST00000558020 CCDC8Q9H0W5 538 aaPredicted RBP16.61■□□□□ 0.25
SNRPA1-204ENST00000558020 DBNLQ9UJU6 430 aaKnown RBP16.61■□□□□ 0.25
SNRPA1-204ENST00000558020 MKI67P46013 3256 aaKnown RBP16.6■□□□□ 0.25
SNRPA1-204ENST00000558020 IDH1O75874 414 aaKnown RBP16.6■□□□□ 0.25
SNRPA1-204ENST00000558020 CAPN2P17655 700 aa16.6■□□□□ 0.25
SNRPA1-204ENST00000558020 CYP7A1P22680 504 aa16.6■□□□□ 0.25
SNRPA1-204ENST00000558020 PRKCZQ05513 592 aa16.6■□□□□ 0.25
SNRPA1-204ENST00000558020 MAP3K12Q12852 859 aa16.6■□□□□ 0.25
SNRPA1-204ENST00000558020 CEP85Q6P2H3 762 aa16.6■□□□□ 0.25
SNRPA1-204ENST00000558020 MAPKAPK5Q8IW41 473 aa16.6■□□□□ 0.25
SNRPA1-204ENST00000558020 EAF2Q96CJ1 260 aaPredicted RBP16.6■□□□□ 0.25
SNRPA1-204ENST00000558020 RNF208Q9H0X6 261 aa16.6■□□□□ 0.25
SNRPA1-204ENST00000558020 CHMP4BQ9H444 224 aaKnown RBP16.6■□□□□ 0.25
SNRPA1-204ENST00000558020 PCDH10Q9P2E7 1040 aa16.6■□□□□ 0.25
SNRPA1-204ENST00000558020 ADCY3O60266 1144 aa16.59■□□□□ 0.25
SNRPA1-204ENST00000558020 GJB1P08034 283 aa16.59■□□□□ 0.25
SNRPA1-204ENST00000558020 CCL5P13501 91 aa16.59■□□□□ 0.25
SNRPA1-204ENST00000558020 HMGCS2P54868 508 aa16.59■□□□□ 0.25
SNRPA1-204ENST00000558020 CCDC84Q86UT8 332 aaPredicted RBP16.59■□□□□ 0.25
SNRPA1-204ENST00000558020 ANKRD13CQ8N6S4 541 aa16.59■□□□□ 0.25
SNRPA1-204ENST00000558020 PXYLP1Q8TE99 480 aa16.59■□□□□ 0.25
SNRPA1-204ENST00000558020 WDR18Q9BV38 432 aa16.59■□□□□ 0.25
SNRPA1-204ENST00000558020 PIH1D3Q9NQM4 214 aaKnown RBP16.59■□□□□ 0.25
SNRPA1-204ENST00000558020 TMOD4Q9NZQ9 345 aa16.59■□□□□ 0.25
SNRPA1-204ENST00000558020 PALD1Q9ULE6 856 aa16.59■□□□□ 0.25
SNRPA1-204ENST00000558020 C19orf81C9J6K1 198 aa16.58■□□□□ 0.24
SNRPA1-204ENST00000558020 HMMRO75330 724 aa16.58■□□□□ 0.24
SNRPA1-204ENST00000558020 FLT3LGP49771 235 aa16.58■□□□□ 0.24
SNRPA1-204ENST00000558020 IRF5Q13568 498 aa16.58■□□□□ 0.24
SNRPA1-204ENST00000558020 MTFR1Q15390 333 aa16.58■□□□□ 0.24
SNRPA1-204ENST00000558020 FAM110CQ1W6H9 321 aa16.58■□□□□ 0.24
SNRPA1-204ENST00000558020 SH3D19Q5HYK7 790 aa16.58■□□□□ 0.24
SNRPA1-204ENST00000558020 TREML2Q5T2D2 321 aa16.58■□□□□ 0.24
SNRPA1-204ENST00000558020 AACSQ86V21 672 aa16.58■□□□□ 0.24
SNRPA1-204ENST00000558020 METTL16Q86W50 562 aaKnown RBP16.58■□□□□ 0.24
SNRPA1-204ENST00000558020 PANK1Q8TE04 598 aa16.58■□□□□ 0.24
SNRPA1-204ENST00000558020 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.58■□□□□ 0.24
SNRPA1-204ENST00000558020 FLT1P17948 1338 aa16.58■□□□□ 0.24
SNRPA1-204ENST00000558020 BRCA2P51587 3418 aa16.58■□□□□ 0.24
SNRPA1-204ENST00000558020 ZSWIM8A7E2V4 1837 aa16.57■□□□□ 0.24
SNRPA1-204ENST00000558020 USP5P45974 858 aa16.57■□□□□ 0.24
SNRPA1-204ENST00000558020 GJA8P48165 433 aa16.57■□□□□ 0.24
SNRPA1-204ENST00000558020 BACE1P56817 501 aa16.57■□□□□ 0.24
SNRPA1-204ENST00000558020 TTF1Q15361 905 aaPredicted RBP16.57■□□□□ 0.24
SNRPA1-204ENST00000558020 ADGRA1Q86SQ6 560 aa16.57■□□□□ 0.24
SNRPA1-204ENST00000558020 RPAP2Q8IXW5 612 aaPredicted RBP16.57■□□□□ 0.24
SNRPA1-204ENST00000558020 GABRQQ9UN88 632 aa16.57■□□□□ 0.24
SNRPA1-204ENST00000558020 EXOC6BQ9Y2D4 811 aa16.57■□□□□ 0.24
SNRPA1-204ENST00000558020 PHIPQ8WWQ0 1821 aa16.56■□□□□ 0.24
SNRPA1-204ENST00000558020 USP17L10C9JJH3 530 aa16.56■□□□□ 0.24
SNRPA1-204ENST00000558020 IRX3P78415 501 aaPredicted RBP16.56■□□□□ 0.24
SNRPA1-204ENST00000558020 TTC6Q86TZ1 520 aa16.56■□□□□ 0.24
SNRPA1-204ENST00000558020 CLASRPQ8N2M8 674 aaKnown RBP16.56■□□□□ 0.24
SNRPA1-204ENST00000558020 MAGEB6Q8N7X4 407 aa16.56■□□□□ 0.24
SNRPA1-204ENST00000558020 ASCC2Q9H1I8 757 aaPredicted RBP16.56■□□□□ 0.24
SNRPA1-204ENST00000558020 TLR7Q9NYK1 1049 aaKnown RBP16.56■□□□□ 0.24
SNRPA1-204ENST00000558020 SAP30BPQ9UHR5 308 aaKnown RBP16.56■□□□□ 0.24
SNRPA1-204ENST00000558020 DDX19BQ9UMR2 479 aa16.56■□□□□ 0.24
SNRPA1-204ENST00000558020 PTPRFP10586 1907 aa16.56■□□□□ 0.24
SNRPA1-204ENST00000558020 MGAMO43451 1857 aa16.55■□□□□ 0.24
SNRPA1-204ENST00000558020 HOXA7P31268 230 aaPredicted RBP16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms