RNA–Protein interactions for RNA: ENST00000557866.1

SPG11-204, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 468 nt, Biotype non stop decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-204ENST00000557866 ADD2P35612 726 aa8.82□□□□□ -1
SPG11-204ENST00000557866 GYG1P46976 350 aa8.82□□□□□ -1
SPG11-204ENST00000557866 CLK2P49760 499 aaKnown RBP8.82□□□□□ -1
SPG11-204ENST00000557866 GRAPQ13588 217 aa8.82□□□□□ -1
SPG11-204ENST00000557866 TSGA10IPQ3SY00 556 aa8.82□□□□□ -1
SPG11-204ENST00000557866 FBXO33Q7Z6M2 555 aa8.82□□□□□ -1
SPG11-204ENST00000557866 ZNF511Q8NB15 262 aa8.82□□□□□ -1
SPG11-204ENST00000557866 GRAPLQ8TC17 118 aaPredicted RBP8.82□□□□□ -1
SPG11-204ENST00000557866 APPBP2Q92624 585 aa8.82□□□□□ -1
SPG11-204ENST00000557866 TMX3Q96JJ7 454 aa8.82□□□□□ -1
SPG11-204ENST00000557866 FAM84BQ96KN1 310 aaPredicted RBP8.82□□□□□ -1
SPG11-204ENST00000557866 JAKMIP1Q96N16 626 aaKnown RBP8.82□□□□□ -1
SPG11-204ENST00000557866 CAMKK2Q96RR4 588 aa8.82□□□□□ -1
SPG11-204ENST00000557866 TM6SF1Q9BZW5 370 aa8.82□□□□□ -1
SPG11-204ENST00000557866 PUS7LQ9H0K6 701 aaKnown RBP8.82□□□□□ -1
SPG11-204ENST00000557866 WWC3Q9ULE0 1092 aa8.82□□□□□ -1
SPG11-204ENST00000557866 UBR3Q6ZT12 1888 aa8.82□□□□□ -1
SPG11-204ENST00000557866 RPAP1Q9BWH6 1393 aaPredicted RBP8.82□□□□□ -1
SPG11-204ENST00000557866 TNRC6CQ9HCJ0 1690 aaKnown RBP8.81□□□□□ -1
SPG11-204ENST00000557866 PNPLA7Q6ZV29 1317 aa8.81□□□□□ -1
SPG11-204ENST00000557866 NPHP1O15259 732 aa8.81□□□□□ -1
SPG11-204ENST00000557866 HSPD1P10809 573 aaKnown RBP8.81□□□□□ -1
SPG11-204ENST00000557866 PDE6AP16499 860 aa8.81□□□□□ -1
SPG11-204ENST00000557866 CASTP20810 708 aaKnown RBP8.81□□□□□ -1
SPG11-204ENST00000557866 VARSP26640 1264 aaKnown RBP8.81□□□□□ -1
SPG11-204ENST00000557866 KCNJ4P48050 445 aa8.81□□□□□ -1
SPG11-204ENST00000557866 MCM2P49736 904 aa8.81□□□□□ -1
SPG11-204ENST00000557866 CUL4AQ13619 759 aa8.81□□□□□ -1
SPG11-204ENST00000557866 TTF1Q15361 905 aaPredicted RBP8.81□□□□□ -1
SPG11-204ENST00000557866 NFKBIBQ15653 356 aa8.81□□□□□ -1
SPG11-204ENST00000557866 EZH2Q15910 746 aaKnown RBP8.81□□□□□ -1
SPG11-204ENST00000557866 QPCTQ16769 361 aa8.81□□□□□ -1
SPG11-204ENST00000557866 LINC01559Q495D7 138 aa8.81□□□□□ -1
SPG11-204ENST00000557866 RUFY3Q7L099 469 aa8.81□□□□□ -1
SPG11-204ENST00000557866 ZGPATQ8N5A5 531 aaKnown RBP8.81□□□□□ -1
SPG11-204ENST00000557866 HPS1Q92902 700 aa8.81□□□□□ -1
SPG11-204ENST00000557866 DSCC1Q9BVC3 393 aa8.81□□□□□ -1
SPG11-204ENST00000557866 CHMP5Q9NZZ3 219 aa8.81□□□□□ -1
SPG11-204ENST00000557866 IDH1O75874 414 aaKnown RBP8.8□□□□□ -1
SPG11-204ENST00000557866 F12P00748 615 aaPredicted RBP8.8□□□□□ -1
SPG11-204ENST00000557866 CYP21A2P08686 494 aa8.8□□□□□ -1
SPG11-204ENST00000557866 HOXA10P31260 410 aaPredicted RBP8.8□□□□□ -1
SPG11-204ENST00000557866 AK2P54819 239 aa8.8□□□□□ -1
SPG11-204ENST00000557866 ST5P78524 1137 aa8.8□□□□□ -1
SPG11-204ENST00000557866 UBE3CQ15386 1083 aa8.8□□□□□ -1
SPG11-204ENST00000557866 WASHC4Q2M389 1173 aa8.8□□□□□ -1
SPG11-204ENST00000557866 LRRFIP1Q32MZ4 808 aaKnown RBP8.8□□□□□ -1
SPG11-204ENST00000557866 SLC9C2Q5TAH2 1124 aa8.8□□□□□ -1
SPG11-204ENST00000557866 TTLL5Q6EMB2 1281 aa8.8□□□□□ -1
SPG11-204ENST00000557866 STOX1Q6ZVD7 989 aa8.8□□□□□ -1
SPG11-204ENST00000557866 NOL8Q76FK4 1167 aaKnown RBP8.8□□□□□ -1
SPG11-204ENST00000557866 NLGN1Q8N2Q7 840 aa8.8□□□□□ -1
SPG11-204ENST00000557866 ANKRD2Q9GZV1 360 aa8.8□□□□□ -1
SPG11-204ENST00000557866 IQSEC3Q9UPP2 1182 aaPredicted RBP8.8□□□□□ -1
SPG11-204ENST00000557866 WASF2Q9Y6W5 498 aa8.8□□□□□ -1
SPG11-204ENST00000557866 COL1A1P02452 1464 aaPredicted RBP8.8□□□□□ -1
SPG11-204ENST00000557866 ZNF532Q9HCE3 1301 aa8.8□□□□□ -1
SPG11-204ENST00000557866 GPAA1O43292 621 aa8.79□□□□□ -1
SPG11-204ENST00000557866 MMP10P09238 476 aa8.79□□□□□ -1
SPG11-204ENST00000557866 ZKSCAN1P17029 563 aaPredicted RBP8.79□□□□□ -1
SPG11-204ENST00000557866 RNF20Q5VTR2 975 aa8.79□□□□□ -1
SPG11-204ENST00000557866 TXNRD3Q86VQ6 643 aa8.79□□□□□ -1
SPG11-204ENST00000557866 MPNDQ8N594 471 aa8.79□□□□□ -1
SPG11-204ENST00000557866 MAGEB6Q8N7X4 407 aa8.79□□□□□ -1
SPG11-204ENST00000557866 IL27Q8NEV9 243 aa8.79□□□□□ -1
SPG11-204ENST00000557866 FLAD1Q8NFF5 587 aa8.79□□□□□ -1
SPG11-204ENST00000557866 TSC1Q92574 1164 aa8.79□□□□□ -1
SPG11-204ENST00000557866 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.79□□□□□ -1
SPG11-204ENST00000557866 PDRG1Q9NUG6 133 aa8.79□□□□□ -1
SPG11-204ENST00000557866 POLR3EQ9NVU0 708 aa8.79□□□□□ -1
SPG11-204ENST00000557866 GMPR2Q9P2T1 348 aaKnown RBP8.79□□□□□ -1
SPG11-204ENST00000557866 CYP46A1Q9Y6A2 500 aa8.79□□□□□ -1
SPG11-204ENST00000557866 AK9Q5TCS8 1911 aa8.79□□□□□ -1
SPG11-204ENST00000557866 SPEF2Q9C093 1822 aa8.79□□□□□ -1
SPG11-204ENST00000557866 ARAP2Q8WZ64 1704 aa8.78□□□□□ -1
SPG11-204ENST00000557866 FRAT2O75474 233 aaPredicted RBP8.78□□□□□ -1
SPG11-204ENST00000557866 LARGE1O95461 756 aa8.78□□□□□ -1
SPG11-204ENST00000557866 FGAP02671 866 aa8.78□□□□□ -1
SPG11-204ENST00000557866 RPS6KB1P23443 525 aa8.78□□□□□ -1
SPG11-204ENST00000557866 PSMA5P28066 241 aa8.78□□□□□ -1
SPG11-204ENST00000557866 HIBADHP31937 336 aaKnown RBP8.78□□□□□ -1
SPG11-204ENST00000557866 GPSM2P81274 684 aa8.78□□□□□ -1
SPG11-204ENST00000557866 ST3GAL1Q11201 340 aa8.78□□□□□ -1
SPG11-204ENST00000557866 RAB3GAP1Q15042 981 aa8.78□□□□□ -1
SPG11-204ENST00000557866 SLC15A2Q16348 729 aa8.78□□□□□ -1
SPG11-204ENST00000557866 MSL1Q68DK7 614 aa8.78□□□□□ -1
SPG11-204ENST00000557866 ZSCAN25Q6NSZ9 544 aa8.78□□□□□ -1
SPG11-204ENST00000557866 RPGRQ92834 1020 aaKnown RBP8.78□□□□□ -1
SPG11-204ENST00000557866 RBM17Q96I25 401 aaKnown RBP8.78□□□□□ -1
SPG11-204ENST00000557866 TCEANC2Q96MN5 208 aa8.78□□□□□ -1
SPG11-204ENST00000557866 GPR101Q96P66 508 aaPredicted RBP8.78□□□□□ -1
SPG11-204ENST00000557866 CRAMP1Q96RY5 1269 aa8.78□□□□□ -1
SPG11-204ENST00000557866 STRBPQ96SI9 672 aaKnown RBP8.78□□□□□ -1
SPG11-204ENST00000557866 BRIP1Q9BX63 1249 aa8.78□□□□□ -1
SPG11-204ENST00000557866 ALDH8A1Q9H2A2 487 aaPredicted RBP8.78□□□□□ -1
SPG11-204ENST00000557866 KDM4CQ9H3R0 1056 aa8.78□□□□□ -1
SPG11-204ENST00000557866 GNL3LQ9NVN8 582 aaKnown RBP8.78□□□□□ -1
SPG11-204ENST00000557866 AKAP11Q9UKA4 1901 aa8.78□□□□□ -1
SPG11-204ENST00000557866 TNS1Q9HBL0 1735 aaKnown RBP8.77□□□□□ -1
SPG11-204ENST00000557866 HSP90AA1P07900 732 aaKnown RBP8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms