RNA–Protein interactions for RNA: ENST00000557765.1

GABRB3-213, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2

Gene GABRB3, Length 560 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-213ENST00000557765 RNF181Q9P0P0 153 aa12.38□□□□□ -0.43
GABRB3-213ENST00000557765 ANGEL1Q9UNK9 670 aaKnown RBP12.38□□□□□ -0.43
GABRB3-213ENST00000557765 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.38□□□□□ -0.43
GABRB3-213ENST00000557765 ECM29Q5VYK3 1845 aa12.38□□□□□ -0.43
GABRB3-213ENST00000557765 COL4A5P29400 1685 aa12.38□□□□□ -0.43
GABRB3-213ENST00000557765 GRIK5Q16478 980 aa12.37□□□□□ -0.43
GABRB3-213ENST00000557765 SYNE3Q6ZMZ3 975 aa12.37□□□□□ -0.43
GABRB3-213ENST00000557765 USP50Q70EL3 339 aaPredicted RBP12.37□□□□□ -0.43
GABRB3-213ENST00000557765 ZNF444Q8N0Y2 327 aaPredicted RBP12.37□□□□□ -0.43
GABRB3-213ENST00000557765 FAM177A1Q8N128 213 aaPredicted RBP12.37□□□□□ -0.43
GABRB3-213ENST00000557765 ANKS1AQ92625 1134 aa12.37□□□□□ -0.43
GABRB3-213ENST00000557765 LLPHQ9BRT6 129 aaKnown RBP12.37□□□□□ -0.43
GABRB3-213ENST00000557765 TRIM34Q9BYJ4 488 aa12.37□□□□□ -0.43
GABRB3-213ENST00000557765 MKNK2Q9HBH9 465 aa12.37□□□□□ -0.43
GABRB3-213ENST00000557765 KCNQ5Q9NR82 932 aa12.37□□□□□ -0.43
GABRB3-213ENST00000557765 CNOT7Q9UIV1 285 aaKnown RBP12.37□□□□□ -0.43
GABRB3-213ENST00000557765 CIZ1Q9ULV3 898 aaPredicted RBP12.37□□□□□ -0.43
GABRB3-213ENST00000557765 JAG2Q9Y219 1238 aa12.37□□□□□ -0.43
GABRB3-213ENST00000557765 NAV1Q8NEY1 1877 aa12.37□□□□□ -0.43
GABRB3-213ENST00000557765 NID2Q14112 1375 aa12.36□□□□□ -0.43
GABRB3-213ENST00000557765 GLTPD2A6NH11 291 aa12.36□□□□□ -0.43
GABRB3-213ENST00000557765 UNCXA6NJT0 531 aa12.36□□□□□ -0.43
GABRB3-213ENST00000557765 MINDY4BA8MYZ0 360 aa12.36□□□□□ -0.43
GABRB3-213ENST00000557765 F8W031 263 aaPredicted RBP12.36□□□□□ -0.43
GABRB3-213ENST00000557765 WNT10BO00744 389 aa12.36□□□□□ -0.43
GABRB3-213ENST00000557765 PRKAB2O43741 272 aa12.36□□□□□ -0.43
GABRB3-213ENST00000557765 CDKL5O76039 1030 aa12.36□□□□□ -0.43
GABRB3-213ENST00000557765 CHGBP05060 677 aa12.36□□□□□ -0.43
GABRB3-213ENST00000557765 HSP90AA1P07900 732 aaKnown RBP12.36□□□□□ -0.43
GABRB3-213ENST00000557765 YBX3P16989 372 aaKnown RBP eCLIP12.36□□□□□ -0.43
GABRB3-213ENST00000557765 GMPSP49915 693 aaPredicted RBP12.36□□□□□ -0.43
GABRB3-213ENST00000557765 SCNN1DP51172 638 aa12.36□□□□□ -0.43
GABRB3-213ENST00000557765 MAP3K10Q02779 954 aa12.36□□□□□ -0.43
GABRB3-213ENST00000557765 RASSF7Q02833 373 aa12.36□□□□□ -0.43
GABRB3-213ENST00000557765 GABPAQ06546 454 aa12.36□□□□□ -0.43
GABRB3-213ENST00000557765 CUL4AQ13619 759 aa12.36□□□□□ -0.43
GABRB3-213ENST00000557765 CPLX2Q6PUV4 134 aaKnown RBP12.36□□□□□ -0.43
GABRB3-213ENST00000557765 SLC51AQ86UW1 340 aa12.36□□□□□ -0.43
GABRB3-213ENST00000557765 MICALL2Q8IY33 904 aa12.36□□□□□ -0.43
GABRB3-213ENST00000557765 TBC1D2Q9BYX2 928 aa12.36□□□□□ -0.43
GABRB3-213ENST00000557765 RBM27Q9P2N5 1060 aaKnown RBP12.36□□□□□ -0.43
GABRB3-213ENST00000557765 SCN4AP35499 1836 aa12.35□□□□□ -0.43
GABRB3-213ENST00000557765 PDCP20941 246 aa12.35□□□□□ -0.43
GABRB3-213ENST00000557765 KIF4BQ2VIQ3 1234 aa12.35□□□□□ -0.43
GABRB3-213ENST00000557765 ADCK5Q3MIX3 580 aa12.35□□□□□ -0.43
GABRB3-213ENST00000557765 SLFNL1Q499Z3 407 aa12.35□□□□□ -0.43
GABRB3-213ENST00000557765 C9orf131Q5VYM1 1079 aa12.35□□□□□ -0.43
GABRB3-213ENST00000557765 RCSD1Q6JBY9 416 aa12.35□□□□□ -0.43
GABRB3-213ENST00000557765 PRMT6Q96LA8 375 aaPredicted RBP12.35□□□□□ -0.43
GABRB3-213ENST00000557765 ZNF70Q9UC06 446 aaPredicted RBP12.35□□□□□ -0.43
GABRB3-213ENST00000557765 TSPY2A6NKD2 308 aa12.34□□□□□ -0.43
GABRB3-213ENST00000557765 PRC1O43663 620 aa12.34□□□□□ -0.43
GABRB3-213ENST00000557765 NOVP48745 357 aa12.34□□□□□ -0.43
GABRB3-213ENST00000557765 HMGN5P82970 282 aaKnown RBP12.34□□□□□ -0.43
GABRB3-213ENST00000557765 DCAF15Q66K64 600 aa12.34□□□□□ -0.43
GABRB3-213ENST00000557765 TATDN1Q6P1N9 297 aa12.34□□□□□ -0.43
GABRB3-213ENST00000557765 MAPKAPK5Q8IW41 473 aa12.34□□□□□ -0.43
GABRB3-213ENST00000557765 TEX2Q8IWB9 1127 aa12.34□□□□□ -0.43
GABRB3-213ENST00000557765 CRACR2BQ8N4Y2 399 aaPredicted RBP12.34□□□□□ -0.43
GABRB3-213ENST00000557765 NEDD1Q8NHV4 660 aa12.34□□□□□ -0.43
GABRB3-213ENST00000557765 ZSCAN10Q96SZ4 725 aaPredicted RBP12.34□□□□□ -0.43
GABRB3-213ENST00000557765 UPF3BQ9BZI7 483 aaKnown RBP12.34□□□□□ -0.43
GABRB3-213ENST00000557765 ZSWIM5Q9P217 1185 aa12.34□□□□□ -0.43
GABRB3-213ENST00000557765 KDM4AO75164 1064 aa12.33□□□□□ -0.44
GABRB3-213ENST00000557765 DDAH1O94760 285 aa12.33□□□□□ -0.44
GABRB3-213ENST00000557765 TSPY3P0CV98 308 aa12.33□□□□□ -0.44
GABRB3-213ENST00000557765 TSPY8P0CW00 308 aa12.33□□□□□ -0.44
GABRB3-213ENST00000557765 SMARCA1P28370 1054 aa12.33□□□□□ -0.44
GABRB3-213ENST00000557765 GNAQP50148 359 aa12.33□□□□□ -0.44
GABRB3-213ENST00000557765 AK2P54819 239 aa12.33□□□□□ -0.44
GABRB3-213ENST00000557765 HAND2P61296 217 aa12.33□□□□□ -0.44
GABRB3-213ENST00000557765 WTAPQ15007 396 aa12.33□□□□□ -0.44
GABRB3-213ENST00000557765 SUPT20HL1Q3ZLR7 823 aa12.33□□□□□ -0.44
GABRB3-213ENST00000557765 STOX1Q6ZVD7 989 aa12.33□□□□□ -0.44
GABRB3-213ENST00000557765 TBC1D10CQ8IV04 446 aa12.33□□□□□ -0.44
GABRB3-213ENST00000557765 TMX3Q96JJ7 454 aa12.33□□□□□ -0.44
GABRB3-213ENST00000557765 LZTS2Q9BRK4 669 aa12.33□□□□□ -0.44
GABRB3-213ENST00000557765 NBPF3Q9H094 633 aa12.33□□□□□ -0.44
GABRB3-213ENST00000557765 TDRD3Q9H7E2 651 aaKnown RBP12.33□□□□□ -0.44
GABRB3-213ENST00000557765 RBM28Q9NW13 759 aaKnown RBP12.33□□□□□ -0.44
GABRB3-213ENST00000557765 FAM198AQ9UFP1 575 aa12.33□□□□□ -0.44
GABRB3-213ENST00000557765 PGAP2Q9UHJ9 254 aa12.33□□□□□ -0.44
GABRB3-213ENST00000557765 HACL1Q9UJ83 578 aa12.33□□□□□ -0.44
GABRB3-213ENST00000557765 GJA3Q9Y6H8 435 aa12.33□□□□□ -0.44
GABRB3-213ENST00000557765 CDK5RAP2Q96SN8 1893 aa12.33□□□□□ -0.44
GABRB3-213ENST00000557765 CCDC69A6NI79 296 aa12.32□□□□□ -0.44
GABRB3-213ENST00000557765 SH2B2O14492 632 aaPredicted RBP12.32□□□□□ -0.44
GABRB3-213ENST00000557765 IFIT3O14879 490 aaKnown RBP12.32□□□□□ -0.44
GABRB3-213ENST00000557765 PFKFB2O60825 505 aa12.32□□□□□ -0.44
GABRB3-213ENST00000557765 KIF5BP33176 963 aa12.32□□□□□ -0.44
GABRB3-213ENST00000557765 CDK8P49336 464 aa12.32□□□□□ -0.44
GABRB3-213ENST00000557765 Q6ZUG5 572 aa12.32□□□□□ -0.44
GABRB3-213ENST00000557765 TMEM179Q6ZVK1 233 aa12.32□□□□□ -0.44
GABRB3-213ENST00000557765 ZSCAN29Q8IWY8 852 aaPredicted RBP12.32□□□□□ -0.44
GABRB3-213ENST00000557765 IGDCC4Q8TDY8 1250 aa12.32□□□□□ -0.44
GABRB3-213ENST00000557765 CSRNP1Q96S65 589 aa12.32□□□□□ -0.44
GABRB3-213ENST00000557765 MXD3Q9BW11 206 aa12.32□□□□□ -0.44
GABRB3-213ENST00000557765 SLKQ9H2G2 1235 aaPredicted RBP12.32□□□□□ -0.44
GABRB3-213ENST00000557765 SH2D4AQ9H788 454 aa12.32□□□□□ -0.44
GABRB3-213ENST00000557765 KANSL2Q9H9L4 492 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms