RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 FXR1P51114 621 aaKnown RBP eCLIP19.63■□□□□ 0.73
SCFD1-224ENST00000557713 SPP2Q13103 211 aa19.63■□□□□ 0.73
SCFD1-224ENST00000557713 POLA2Q14181 598 aa19.63■□□□□ 0.73
SCFD1-224ENST00000557713 TMEM57Q8N5G2 664 aa19.63■□□□□ 0.73
SCFD1-224ENST00000557713 PROCA1Q8NCQ7 364 aaPredicted RBP19.63■□□□□ 0.73
SCFD1-224ENST00000557713 SMCR8Q8TEV9 937 aaPredicted RBP19.63■□□□□ 0.73
SCFD1-224ENST00000557713 LRP2BPQ9P2M1 347 aa19.63■□□□□ 0.73
SCFD1-224ENST00000557713 CAP2P40123 477 aa19.62■□□□□ 0.73
SCFD1-224ENST00000557713 IRF5Q13568 498 aa19.62■□□□□ 0.73
SCFD1-224ENST00000557713 TEX11Q8IYF3 940 aa19.62■□□□□ 0.73
SCFD1-224ENST00000557713 ZNF280CQ8ND82 737 aa19.62■□□□□ 0.73
SCFD1-224ENST00000557713 PXYLP1Q8TE99 480 aa19.62■□□□□ 0.73
SCFD1-224ENST00000557713 SH3RF3Q8TEJ3 882 aaPredicted RBP19.62■□□□□ 0.73
SCFD1-224ENST00000557713 TBC1D2Q9BYX2 928 aa19.62■□□□□ 0.73
SCFD1-224ENST00000557713 UNC93B1Q9H1C4 597 aa19.62■□□□□ 0.73
SCFD1-224ENST00000557713 TNPO2O14787 897 aaKnown RBP19.61■□□□□ 0.73
SCFD1-224ENST00000557713 ATP8B2P98198 1209 aa19.61■□□□□ 0.73
SCFD1-224ENST00000557713 TNNI3KQ59H18 835 aa19.61■□□□□ 0.73
SCFD1-224ENST00000557713 ZKSCAN2Q63HK3 967 aa19.61■□□□□ 0.73
SCFD1-224ENST00000557713 ANKRD13CQ8N6S4 541 aa19.61■□□□□ 0.73
SCFD1-224ENST00000557713 SSH3Q8TE77 659 aa19.61■□□□□ 0.73
SCFD1-224ENST00000557713 U2AF1L4Q8WU68 220 aaKnown RBP19.61■□□□□ 0.73
SCFD1-224ENST00000557713 SNRKQ9NRH2 765 aa19.61■□□□□ 0.73
SCFD1-224ENST00000557713 FPGT-TNNI3KV9GXZ4 949 aa19.61■□□□□ 0.73
SCFD1-224ENST00000557713 USP17L5A8MUK1 530 aa19.6■□□□□ 0.73
SCFD1-224ENST00000557713 SGPL1O95470 568 aa19.6■□□□□ 0.73
SCFD1-224ENST00000557713 ELNP15502 786 aa19.6■□□□□ 0.73
SCFD1-224ENST00000557713 PPP4CP60510 307 aa19.6■□□□□ 0.73
SCFD1-224ENST00000557713 SH3D19Q5HYK7 790 aa19.6■□□□□ 0.73
SCFD1-224ENST00000557713 DPF3Q92784 378 aa19.6■□□□□ 0.73
SCFD1-224ENST00000557713 DBNDD2Q9BQY9 259 aa19.6■□□□□ 0.73
SCFD1-224ENST00000557713 PI4KBQ9UBF8 816 aa19.6■□□□□ 0.73
SCFD1-224ENST00000557713 HERC5Q9UII4 1024 aaKnown RBP19.6■□□□□ 0.73
SCFD1-224ENST00000557713 PNMA3Q9UL41 463 aa19.6■□□□□ 0.73
SCFD1-224ENST00000557713 HMGCS2P54868 508 aa19.59■□□□□ 0.73
SCFD1-224ENST00000557713 FAM110CQ1W6H9 321 aa19.59■□□□□ 0.73
SCFD1-224ENST00000557713 CCDC158Q5M9N0 1113 aa19.59■□□□□ 0.73
SCFD1-224ENST00000557713 TTC39AQ5SRH9 613 aa19.59■□□□□ 0.73
SCFD1-224ENST00000557713 NAA16Q6N069 864 aaPredicted RBP19.59■□□□□ 0.73
SCFD1-224ENST00000557713 ZNF512BQ96KM6 892 aaPredicted RBP19.59■□□□□ 0.73
SCFD1-224ENST00000557713 DHX36Q9H2U1 1008 aaKnown RBP19.59■□□□□ 0.73
SCFD1-224ENST00000557713 AATFQ9NY61 560 aaKnown RBP eCLIP19.59■□□□□ 0.73
SCFD1-224ENST00000557713 BAG3O95817 575 aa19.58■□□□□ 0.72
SCFD1-224ENST00000557713 INHAP05111 366 aa19.58■□□□□ 0.72
SCFD1-224ENST00000557713 CYP2E1P05181 493 aaPredicted RBP19.58■□□□□ 0.72
SCFD1-224ENST00000557713 GCLCP48506 637 aaPredicted RBP19.58■□□□□ 0.72
SCFD1-224ENST00000557713 ADGRA1Q86SQ6 560 aa19.58■□□□□ 0.72
SCFD1-224ENST00000557713 METTL16Q86W50 562 aaKnown RBP19.58■□□□□ 0.72
SCFD1-224ENST00000557713 COA7Q96BR5 231 aa19.58■□□□□ 0.72
SCFD1-224ENST00000557713 NOL10Q9BSC4 688 aaKnown RBP19.58■□□□□ 0.72
SCFD1-224ENST00000557713 LOC285556D6RIA3 1793 aa19.57■□□□□ 0.72
SCFD1-224ENST00000557713 SURF6O75683 361 aaKnown RBP19.57■□□□□ 0.72
SCFD1-224ENST00000557713 PLCG2P16885 1265 aa19.57■□□□□ 0.72
SCFD1-224ENST00000557713 CAPN2P17655 700 aa19.57■□□□□ 0.72
SCFD1-224ENST00000557713 JAG1P78504 1218 aa19.57■□□□□ 0.72
SCFD1-224ENST00000557713 PABPC4Q13310 644 aaKnown RBP eCLIP19.57■□□□□ 0.72
SCFD1-224ENST00000557713 HTATIP2Q9BUP3 242 aa19.57■□□□□ 0.72
SCFD1-224ENST00000557713 WDR18Q9BV38 432 aa19.57■□□□□ 0.72
SCFD1-224ENST00000557713 AS3MTQ9HBK9 375 aa19.57■□□□□ 0.72
SCFD1-224ENST00000557713 NOP58Q9Y2X3 529 aaKnown RBP19.57■□□□□ 0.72
SCFD1-224ENST00000557713 ATAD5Q96QE3 1844 aa19.56■□□□□ 0.72
SCFD1-224ENST00000557713 IGSF3O75054 1194 aa19.56■□□□□ 0.72
SCFD1-224ENST00000557713 FOXP4Q8IVH2 680 aaPredicted RBP19.56■□□□□ 0.72
SCFD1-224ENST00000557713 MAPKAPK5Q8IW41 473 aa19.56■□□□□ 0.72
SCFD1-224ENST00000557713 TGFBRAP1Q8WUH2 860 aa19.56■□□□□ 0.72
SCFD1-224ENST00000557713 ASCC2Q9H1I8 757 aaPredicted RBP19.56■□□□□ 0.72
SCFD1-224ENST00000557713 DNAJC18Q9H819 358 aa19.56■□□□□ 0.72
SCFD1-224ENST00000557713 PAK6Q9NQU5 681 aaPredicted RBP19.56■□□□□ 0.72
SCFD1-224ENST00000557713 SIPA1L1O43166 1804 aa19.55■□□□□ 0.72
SCFD1-224ENST00000557713 ZBTB7BO15156 539 aaPredicted RBP19.55■□□□□ 0.72
SCFD1-224ENST00000557713 FARP2O94887 1054 aaPredicted RBP19.55■□□□□ 0.72
SCFD1-224ENST00000557713 ZAP70P43403 619 aa19.55■□□□□ 0.72
SCFD1-224ENST00000557713 OS9Q13438 667 aaPredicted RBP19.55■□□□□ 0.72
SCFD1-224ENST00000557713 CHRDL2Q6WN34 429 aa19.55■□□□□ 0.72
SCFD1-224ENST00000557713 DEFB118Q96PH6 123 aa19.55■□□□□ 0.72
SCFD1-224ENST00000557713 C1orf115Q9H7X2 142 aa19.55■□□□□ 0.72
SCFD1-224ENST00000557713 PIH1D3Q9NQM4 214 aaKnown RBP19.55■□□□□ 0.72
SCFD1-224ENST00000557713 GJD2Q9UKL4 321 aa19.55■□□□□ 0.72
SCFD1-224ENST00000557713 FLT1P17948 1338 aa19.54■□□□□ 0.72
SCFD1-224ENST00000557713 TFRCP02786 760 aaKnown RBP19.54■□□□□ 0.72
SCFD1-224ENST00000557713 ASNSP08243 561 aa19.54■□□□□ 0.72
SCFD1-224ENST00000557713 BACE1P56817 501 aa19.54■□□□□ 0.72
SCFD1-224ENST00000557713 CRISPLD2Q9H0B8 497 aa19.54■□□□□ 0.72
SCFD1-224ENST00000557713 MORF4L1Q9UBU8 362 aa19.54■□□□□ 0.72
SCFD1-224ENST00000557713 DBNLQ9UJU6 430 aaKnown RBP19.54■□□□□ 0.72
SCFD1-224ENST00000557713 TAOK2Q9UL54 1235 aa19.54■□□□□ 0.72
SCFD1-224ENST00000557713 PALD1Q9ULE6 856 aa19.54■□□□□ 0.72
SCFD1-224ENST00000557713 MAST2Q6P0Q8 1798 aa19.54■□□□□ 0.72
SCFD1-224ENST00000557713 HOXA7P31268 230 aaPredicted RBP19.53■□□□□ 0.72
SCFD1-224ENST00000557713 GINM1Q9NU53 330 aa19.53■□□□□ 0.72
SCFD1-224ENST00000557713 RBM27Q9P2N5 1060 aaKnown RBP19.53■□□□□ 0.72
SCFD1-224ENST00000557713 RLBP1P12271 317 aa19.52■□□□□ 0.72
SCFD1-224ENST00000557713 DYNLL1P63167 89 aaKnown RBP19.52■□□□□ 0.72
SCFD1-224ENST00000557713 MTMR2Q13614 643 aa19.52■□□□□ 0.72
SCFD1-224ENST00000557713 EAF2Q96CJ1 260 aaPredicted RBP19.52■□□□□ 0.72
SCFD1-224ENST00000557713 P2RX7Q99572 595 aaKnown RBP19.52■□□□□ 0.72
SCFD1-224ENST00000557713 CCDC8Q9H0W5 538 aaPredicted RBP19.52■□□□□ 0.72
SCFD1-224ENST00000557713 PRO3102Q9H379 93 aa19.52■□□□□ 0.72
SCFD1-224ENST00000557713 TLR7Q9NYK1 1049 aaKnown RBP19.52■□□□□ 0.72
SCFD1-224ENST00000557713 NR2E3Q9Y5X4 410 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms