RNA–Protein interactions for RNA: ENST00000557678.1

GPHN-216, Transcript of gephyrin, humanhuman

TSL 3

Gene GPHN, Length 592 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-216ENST00000557678 PPM1HQ9ULR3 514 aa5.41□□□□□ -1.54
GPHN-216ENST00000557678 TTF2Q9UNY4 1162 aaKnown RBP5.41□□□□□ -1.54
GPHN-216ENST00000557678 GIPC1O14908 333 aa5.4□□□□□ -1.54
GPHN-216ENST00000557678 PAPLNO95428 1278 aa5.4□□□□□ -1.54
GPHN-216ENST00000557678 RNASE1P07998 156 aaKnown RBP5.4□□□□□ -1.54
GPHN-216ENST00000557678 CELA3AP09093 270 aa5.4□□□□□ -1.54
GPHN-216ENST00000557678 USP17L7P0C7H9 530 aa5.4□□□□□ -1.54
GPHN-216ENST00000557678 PCNX4Q63HM2 1172 aa5.4□□□□□ -1.54
GPHN-216ENST00000557678 FAM168AQ92567 244 aa5.4□□□□□ -1.54
GPHN-216ENST00000557678 ASB16Q96NS5 453 aa5.4□□□□□ -1.54
GPHN-216ENST00000557678 PLAGL2Q9UPG8 496 aa5.4□□□□□ -1.54
GPHN-216ENST00000557678 FANCGO15287 622 aa5.39□□□□□ -1.55
GPHN-216ENST00000557678 FMR1Q06787 632 aaKnown RBP eCLIP5.39□□□□□ -1.55
GPHN-216ENST00000557678 UBE3DQ7Z6J8 389 aa5.39□□□□□ -1.55
GPHN-216ENST00000557678 KCT2Q8NC54 265 aa5.39□□□□□ -1.55
GPHN-216ENST00000557678 ASB11Q8WXH4 323 aa5.39□□□□□ -1.55
GPHN-216ENST00000557678 HEXIM2Q96MH2 286 aaKnown RBP5.39□□□□□ -1.55
GPHN-216ENST00000557678 C12orf49Q9H741 205 aa5.39□□□□□ -1.55
GPHN-216ENST00000557678 PRDM7Q9NQW5 492 aa5.39□□□□□ -1.55
GPHN-216ENST00000557678 PRDM5Q9NQX1 630 aaPredicted RBP5.39□□□□□ -1.55
GPHN-216ENST00000557678 MBNL3Q9NUK0 354 aaKnown RBP5.39□□□□□ -1.55
GPHN-216ENST00000557678 FAM8A1Q9UBU6 413 aa5.39□□□□□ -1.55
GPHN-216ENST00000557678 ADAMTS6Q9UKP5 1117 aa5.39□□□□□ -1.55
GPHN-216ENST00000557678 TPX2Q9ULW0 747 aaKnown RBP5.39□□□□□ -1.55
GPHN-216ENST00000557678 CYP8B1Q9UNU6 501 aa5.39□□□□□ -1.55
GPHN-216ENST00000557678 LDHBP07195 334 aaKnown RBP5.38□□□□□ -1.55
GPHN-216ENST00000557678 C8AP07357 584 aa5.38□□□□□ -1.55
GPHN-216ENST00000557678 ETF1P62495 437 aaKnown RBP5.38□□□□□ -1.55
GPHN-216ENST00000557678 KCNA1Q09470 495 aa5.38□□□□□ -1.55
GPHN-216ENST00000557678 ZNF648Q5T619 568 aaPredicted RBP5.38□□□□□ -1.55
GPHN-216ENST00000557678 ZBTB37Q5TC79 503 aa5.38□□□□□ -1.55
GPHN-216ENST00000557678 RASIP1Q5U651 963 aa5.38□□□□□ -1.55
GPHN-216ENST00000557678 HDXQ7Z353 690 aa5.38□□□□□ -1.55
GPHN-216ENST00000557678 ATG4DQ86TL0 474 aaPredicted RBP5.38□□□□□ -1.55
GPHN-216ENST00000557678 WFDC3Q8IUB2 231 aa5.38□□□□□ -1.55
GPHN-216ENST00000557678 LRRN4CLQ8ND94 238 aa5.38□□□□□ -1.55
GPHN-216ENST00000557678 ZNF507Q8TCN5 953 aa5.38□□□□□ -1.55
GPHN-216ENST00000557678 FAM155AB1AL88 458 aaPredicted RBP5.37□□□□□ -1.55
GPHN-216ENST00000557678 P4HBP07237 508 aaKnown RBP5.37□□□□□ -1.55
GPHN-216ENST00000557678 ZP2Q05996 745 aa5.37□□□□□ -1.55
GPHN-216ENST00000557678 INPP5AQ14642 412 aa5.37□□□□□ -1.55
GPHN-216ENST00000557678 PKN1Q16512 942 aa5.37□□□□□ -1.55
GPHN-216ENST00000557678 CDKAL1Q5VV42 579 aa5.37□□□□□ -1.55
GPHN-216ENST00000557678 SLC23A3Q6PIS1 610 aa5.37□□□□□ -1.55
GPHN-216ENST00000557678 ARMCX6Q7L4S7 300 aa5.37□□□□□ -1.55
GPHN-216ENST00000557678 POU5F2Q8N7G0 328 aa5.37□□□□□ -1.55
GPHN-216ENST00000557678 FOXQ1Q9C009 403 aa5.37□□□□□ -1.55
GPHN-216ENST00000557678 SNX11Q9Y5W9 270 aa5.37□□□□□ -1.55
GPHN-216ENST00000557678 IGF2BP3O00425 579 aaKnown RBP eCLIP5.36□□□□□ -1.55
GPHN-216ENST00000557678 EIF4BP23588 611 aaKnown RBP5.36□□□□□ -1.55
GPHN-216ENST00000557678 NTF4P34130 210 aa5.36□□□□□ -1.55
GPHN-216ENST00000557678 TTBK2Q6IQ55 1244 aa5.36□□□□□ -1.55
GPHN-216ENST00000557678 LRFN4Q6PJG9 635 aa5.36□□□□□ -1.55
GPHN-216ENST00000557678 KSR1Q8IVT5 923 aa5.36□□□□□ -1.55
GPHN-216ENST00000557678 PLPPR2Q96GM1 343 aa5.36□□□□□ -1.55
GPHN-216ENST00000557678 MIPEPQ99797 713 aa5.36□□□□□ -1.55
GPHN-216ENST00000557678 CACNA2D2Q9NY47 1150 aa5.36□□□□□ -1.55
GPHN-216ENST00000557678 FARP2O94887 1054 aaPredicted RBP5.35□□□□□ -1.55
GPHN-216ENST00000557678 LRIG2O94898 1065 aa5.35□□□□□ -1.55
GPHN-216ENST00000557678 CCDC85BQ15834 202 aaPredicted RBP5.35□□□□□ -1.55
GPHN-216ENST00000557678 MAP3K11Q16584 847 aa5.35□□□□□ -1.55
GPHN-216ENST00000557678 WIPI1Q5MNZ9 446 aaPredicted RBP5.35□□□□□ -1.55
GPHN-216ENST00000557678 SV2BQ7L1I2 683 aa5.35□□□□□ -1.55
GPHN-216ENST00000557678 SPACA3Q8IXA5 215 aa5.35□□□□□ -1.55
GPHN-216ENST00000557678 XAGE3Q8WTP9 111 aa5.35□□□□□ -1.55
GPHN-216ENST00000557678 SLC38A3Q99624 504 aa5.35□□□□□ -1.55
GPHN-216ENST00000557678 TNKS2Q9H2K2 1166 aa5.35□□□□□ -1.55
GPHN-216ENST00000557678 CARMIL2Q6F5E8 1435 aa5.34□□□□□ -1.55
GPHN-216ENST00000557678 KRTAP9-7A8MTY7 169 aa5.34□□□□□ -1.55
GPHN-216ENST00000557678 EOMESO95936 686 aa5.34□□□□□ -1.55
GPHN-216ENST00000557678 CLCN7P51798 805 aa5.34□□□□□ -1.55
GPHN-216ENST00000557678 FGD1P98174 961 aa5.34□□□□□ -1.55
GPHN-216ENST00000557678 PTPN11Q06124 597 aaPredicted RBP5.34□□□□□ -1.55
GPHN-216ENST00000557678 RING1Q06587 406 aa5.34□□□□□ -1.55
GPHN-216ENST00000557678 ZNF124Q15973 351 aa5.34□□□□□ -1.55
GPHN-216ENST00000557678 KCNMB1Q16558 191 aa5.34□□□□□ -1.55
GPHN-216ENST00000557678 NKPD1Q17RQ9 610 aa5.34□□□□□ -1.55
GPHN-216ENST00000557678 SFRP5Q5T4F7 317 aa5.34□□□□□ -1.55
GPHN-216ENST00000557678 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.34□□□□□ -1.55
GPHN-216ENST00000557678 FRMD6Q96NE9 622 aa5.34□□□□□ -1.55
GPHN-216ENST00000557678 FBRSQ9HAH7 460 aa5.34□□□□□ -1.55
GPHN-216ENST00000557678 MAPK8IP1Q9UQF2 711 aa5.34□□□□□ -1.55
GPHN-216ENST00000557678 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.34□□□□□ -1.55
GPHN-216ENST00000557678 LRRC10BA6NIK2 292 aa5.33□□□□□ -1.56
GPHN-216ENST00000557678 SLITRK5O94991 958 aa5.33□□□□□ -1.56
GPHN-216ENST00000557678 CBX7O95931 251 aa5.33□□□□□ -1.56
GPHN-216ENST00000557678 SEPT6Q14141 434 aa5.33□□□□□ -1.56
GPHN-216ENST00000557678 SCARA3Q6AZY7 606 aa5.33□□□□□ -1.56
GPHN-216ENST00000557678 FAM214BQ7L5A3 538 aa5.33□□□□□ -1.56
GPHN-216ENST00000557678 ZSWIM9Q86XI8 627 aa5.33□□□□□ -1.56
GPHN-216ENST00000557678 MFSD4AQ8N468 514 aa5.33□□□□□ -1.56
GPHN-216ENST00000557678 TMEM40Q8WWA1 233 aa5.33□□□□□ -1.56
GPHN-216ENST00000557678 HSPA12BQ96MM6 686 aa5.33□□□□□ -1.56
GPHN-216ENST00000557678 WNT10AQ9GZT5 417 aa5.33□□□□□ -1.56
GPHN-216ENST00000557678 CARS2Q9HA77 564 aaKnown RBP5.33□□□□□ -1.56
GPHN-216ENST00000557678 PITPNM2Q9BZ72 1349 aa5.32□□□□□ -1.56
GPHN-216ENST00000557678 PRR33A8MZF0 331 aa5.32□□□□□ -1.56
GPHN-216ENST00000557678 PATL2C9JE40 543 aaKnown RBP5.32□□□□□ -1.56
GPHN-216ENST00000557678 H3BS24 57 aa5.32□□□□□ -1.56
GPHN-216ENST00000557678 GNA15P30679 374 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms