RNA–Protein interactions for RNA: ENST00000557624.1

RIPK3-206, Transcript of receptor interacting serine/threonine kinase 3, humanhuman

TSL 1 (best)

Gene RIPK3, Length 1,629 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK3-206ENST00000557624 PI4KBQ9UBF8 816 aa16.82■□□□□ 0.28
RIPK3-206ENST00000557624 FAM196BA6NMK8 535 aa16.81■□□□□ 0.28
RIPK3-206ENST00000557624 TRAF5O00463 557 aa16.81■□□□□ 0.28
RIPK3-206ENST00000557624 SLC27A2O14975 620 aa16.81■□□□□ 0.28
RIPK3-206ENST00000557624 CYP21A2P08686 494 aa16.81■□□□□ 0.28
RIPK3-206ENST00000557624 SLURP2P0DP57 97 aa16.81■□□□□ 0.28
RIPK3-206ENST00000557624 NECTIN1Q15223 517 aa16.81■□□□□ 0.28
RIPK3-206ENST00000557624 CREB3L3Q68CJ9 461 aa16.81■□□□□ 0.28
RIPK3-206ENST00000557624 TRIM34Q9BYJ4 488 aa16.81■□□□□ 0.28
RIPK3-206ENST00000557624 SERPINB13Q9UIV8 391 aa16.81■□□□□ 0.28
RIPK3-206ENST00000557624 EPB41L2O43491 1005 aaKnown RBP16.81■□□□□ 0.28
RIPK3-206ENST00000557624 MCCP23508 829 aa16.81■□□□□ 0.28
RIPK3-206ENST00000557624 HSPA4P34932 840 aa16.81■□□□□ 0.28
RIPK3-206ENST00000557624 RNF20Q5VTR2 975 aa16.81■□□□□ 0.28
RIPK3-206ENST00000557624 MIGA2Q7L4E1 593 aa16.81■□□□□ 0.28
RIPK3-206ENST00000557624 TBC1D10CQ8IV04 446 aa16.81■□□□□ 0.28
RIPK3-206ENST00000557624 SLC44A5Q8NCS7 719 aa16.81■□□□□ 0.28
RIPK3-206ENST00000557624 CDCA5Q96FF9 252 aa16.81■□□□□ 0.28
RIPK3-206ENST00000557624 NBPF3Q9H094 633 aa16.81■□□□□ 0.28
RIPK3-206ENST00000557624 TAF6LQ9Y6J9 622 aa16.81■□□□□ 0.28
RIPK3-206ENST00000557624 ROBO3Q96MS0 1386 aa16.8■□□□□ 0.28
RIPK3-206ENST00000557624 SLC3A2P08195 630 aaKnown RBP16.8■□□□□ 0.28
RIPK3-206ENST00000557624 EHD4Q9H223 541 aa16.8■□□□□ 0.28
RIPK3-206ENST00000557624 MYH8P13535 1937 aa16.79■□□□□ 0.28
RIPK3-206ENST00000557624 ZKSCAN1P17029 563 aaPredicted RBP16.79■□□□□ 0.28
RIPK3-206ENST00000557624 FMR1Q06787 632 aaKnown RBP eCLIP16.79■□□□□ 0.28
RIPK3-206ENST00000557624 SUPT20HL1Q3ZLR7 823 aa16.79■□□□□ 0.28
RIPK3-206ENST00000557624 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.79■□□□□ 0.28
RIPK3-206ENST00000557624 INCENPQ9NQS7 918 aa16.79■□□□□ 0.28
RIPK3-206ENST00000557624 TOMM22Q9NS69 142 aa16.79■□□□□ 0.28
RIPK3-206ENST00000557624 ANAPC4Q9UJX5 808 aa16.79■□□□□ 0.28
RIPK3-206ENST00000557624 SSC5DA1L4H1 1573 aa16.79■□□□□ 0.28
RIPK3-206ENST00000557624 PRDM1O75626 825 aa16.78■□□□□ 0.28
RIPK3-206ENST00000557624 C16orf86Q6ZW13 317 aa16.78■□□□□ 0.28
RIPK3-206ENST00000557624 FOXP4Q8IVH2 680 aaPredicted RBP16.78■□□□□ 0.28
RIPK3-206ENST00000557624 RASEFQ8IZ41 740 aa16.78■□□□□ 0.28
RIPK3-206ENST00000557624 HOOK2Q96ED9 719 aa16.78■□□□□ 0.28
RIPK3-206ENST00000557624 DNAJC18Q9H819 358 aa16.78■□□□□ 0.28
RIPK3-206ENST00000557624 ZNF408Q9H9D4 720 aa16.78■□□□□ 0.28
RIPK3-206ENST00000557624 HERC5Q9UII4 1024 aaKnown RBP16.78■□□□□ 0.28
RIPK3-206ENST00000557624 NF2P35240 595 aa16.78■□□□□ 0.28
RIPK3-206ENST00000557624 CDK8P49336 464 aa16.78■□□□□ 0.28
RIPK3-206ENST00000557624 GABPAQ06546 454 aa16.78■□□□□ 0.28
RIPK3-206ENST00000557624 PDE4BQ07343 736 aa16.78■□□□□ 0.28
RIPK3-206ENST00000557624 PRKG1Q13976 671 aa16.78■□□□□ 0.28
RIPK3-206ENST00000557624 AKNAD1Q5T1N1 836 aa16.78■□□□□ 0.28
RIPK3-206ENST00000557624 DCAF15Q66K64 600 aa16.78■□□□□ 0.28
RIPK3-206ENST00000557624 MFSD6Q6ZSS7 791 aa16.78■□□□□ 0.28
RIPK3-206ENST00000557624 STAG1Q8WVM7 1258 aa16.78■□□□□ 0.28
RIPK3-206ENST00000557624 C22orf23Q9BZE7 217 aa16.78■□□□□ 0.28
RIPK3-206ENST00000557624 MKNK2Q9HBH9 465 aa16.78■□□□□ 0.28
RIPK3-206ENST00000557624 FZD1Q9UP38 647 aa16.78■□□□□ 0.28
RIPK3-206ENST00000557624 TACC3Q9Y6A5 838 aa16.78■□□□□ 0.28
RIPK3-206ENST00000557624 NEDD4P46934 1319 aa16.77■□□□□ 0.27
RIPK3-206ENST00000557624 TOMM70O94826 608 aa16.77■□□□□ 0.27
RIPK3-206ENST00000557624 RRP12Q5JTH9 1297 aaKnown RBP16.77■□□□□ 0.27
RIPK3-206ENST00000557624 STOX1Q6ZVD7 989 aa16.77■□□□□ 0.27
RIPK3-206ENST00000557624 SMC1BQ8NDV3 1235 aa16.77■□□□□ 0.27
RIPK3-206ENST00000557624 RNF41Q9H4P4 317 aaPredicted RBP16.77■□□□□ 0.27
RIPK3-206ENST00000557624 SWAP70Q9UH65 585 aa16.77■□□□□ 0.27
RIPK3-206ENST00000557624 E7EWF7 191 aa16.76■□□□□ 0.27
RIPK3-206ENST00000557624 ITGBL1O95965 494 aaPredicted RBP16.76■□□□□ 0.27
RIPK3-206ENST00000557624 SHMT1P34896 483 aa16.76■□□□□ 0.27
RIPK3-206ENST00000557624 METTL16Q86W50 562 aaKnown RBP16.76■□□□□ 0.27
RIPK3-206ENST00000557624 ZNF287Q9HBT7 754 aa16.76■□□□□ 0.27
RIPK3-206ENST00000557624 SNX14Q9Y5W7 946 aa16.76■□□□□ 0.27
RIPK3-206ENST00000557624 TBC1D12O60347 775 aa16.75■□□□□ 0.27
RIPK3-206ENST00000557624 TTLL12Q14166 644 aaPredicted RBP16.75■□□□□ 0.27
RIPK3-206ENST00000557624 RBM46Q8TBY0 533 aaKnown RBP16.75■□□□□ 0.27
RIPK3-206ENST00000557624 KCNB2Q92953 911 aa16.75■□□□□ 0.27
RIPK3-206ENST00000557624 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.75■□□□□ 0.27
RIPK3-206ENST00000557624 TRDNQ13061 729 aa16.74■□□□□ 0.27
RIPK3-206ENST00000557624 ADCK5Q3MIX3 580 aa16.74■□□□□ 0.27
RIPK3-206ENST00000557624 RALYLQ86SE5 291 aaKnown RBP16.74■□□□□ 0.27
RIPK3-206ENST00000557624 ZNF341Q9BYN7 854 aa16.74■□□□□ 0.27
RIPK3-206ENST00000557624 B4E1Z4 1266 aa16.74■□□□□ 0.27
RIPK3-206ENST00000557624 ORC4O43929 436 aa16.74■□□□□ 0.27
RIPK3-206ENST00000557624 PPP1R12BO60237 982 aaPredicted RBP16.74■□□□□ 0.27
RIPK3-206ENST00000557624 RANBP6O60518 1105 aaKnown RBP16.74■□□□□ 0.27
RIPK3-206ENST00000557624 CELF2O95319 508 aaKnown RBP16.74■□□□□ 0.27
RIPK3-206ENST00000557624 PCP11498 1178 aaKnown RBP16.74■□□□□ 0.27
RIPK3-206ENST00000557624 RASA1P20936 1047 aa16.74■□□□□ 0.27
RIPK3-206ENST00000557624 MAP3K10Q02779 954 aa16.74■□□□□ 0.27
RIPK3-206ENST00000557624 KRT32Q14532 448 aa16.74■□□□□ 0.27
RIPK3-206ENST00000557624 TSGA10IPQ3SY00 556 aa16.74■□□□□ 0.27
RIPK3-206ENST00000557624 ZNF444Q8N0Y2 327 aaPredicted RBP16.74■□□□□ 0.27
RIPK3-206ENST00000557624 JAKMIP1Q96N16 626 aaKnown RBP16.74■□□□□ 0.27
RIPK3-206ENST00000557624 TBC1D32Q96NH3 1257 aa16.74■□□□□ 0.27
RIPK3-206ENST00000557624 WRNIP1Q96S55 665 aa16.74■□□□□ 0.27
RIPK3-206ENST00000557624 CNNM2Q9H8M5 875 aa16.74■□□□□ 0.27
RIPK3-206ENST00000557624 TRPM7Q96QT4 1865 aa16.73■□□□□ 0.27
RIPK3-206ENST00000557624 MPHOSPH10O00566 681 aaKnown RBP16.73■□□□□ 0.27
RIPK3-206ENST00000557624 KDM4AO75164 1064 aa16.73■□□□□ 0.27
RIPK3-206ENST00000557624 GDF11O95390 407 aa16.73■□□□□ 0.27
RIPK3-206ENST00000557624 FGRP09769 529 aa16.73■□□□□ 0.27
RIPK3-206ENST00000557624 CERKLQ49MI3 558 aaPredicted RBP16.73■□□□□ 0.27
RIPK3-206ENST00000557624 FAM47AQ5JRC9 791 aa16.73■□□□□ 0.27
RIPK3-206ENST00000557624 TATDN1Q6P1N9 297 aa16.73■□□□□ 0.27
RIPK3-206ENST00000557624 MOB2Q70IA6 237 aa16.73■□□□□ 0.27
RIPK3-206ENST00000557624 NCOA7Q8NI08 942 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms