RNA–Protein interactions for RNA: ENST00000557431.5

SLIRP-210, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-210ENST00000557431 SLF2Q8IX21 1173 aa17.41■□□□□ 0.38
SLIRP-210ENST00000557431 SPATA5Q8NB90 893 aa17.41■□□□□ 0.38
SLIRP-210ENST00000557431 NKX2-3Q8TAU0 364 aa17.41■□□□□ 0.38
SLIRP-210ENST00000557431 CLUAP1Q96AJ1 413 aa17.41■□□□□ 0.38
SLIRP-210ENST00000557431 DEFB118Q96PH6 123 aa17.41■□□□□ 0.38
SLIRP-210ENST00000557431 SNRKQ9NRH2 765 aa17.41■□□□□ 0.38
SLIRP-210ENST00000557431 AGTPBP1Q9UPW5 1226 aa17.41■□□□□ 0.38
SLIRP-210ENST00000557431 SGPL1O95470 568 aa17.4■□□□□ 0.38
SLIRP-210ENST00000557431 HMGCS2P54868 508 aa17.4■□□□□ 0.38
SLIRP-210ENST00000557431 GORABQ5T7V8 394 aa17.4■□□□□ 0.38
SLIRP-210ENST00000557431 SH3RF3Q8TEJ3 882 aaPredicted RBP17.4■□□□□ 0.38
SLIRP-210ENST00000557431 OSBPL5Q9H0X9 879 aaPredicted RBP17.4■□□□□ 0.38
SLIRP-210ENST00000557431 AKAP2Q9Y2D5 859 aa17.4■□□□□ 0.38
SLIRP-210ENST00000557431 BCAR3O75815 825 aa17.39■□□□□ 0.37
SLIRP-210ENST00000557431 GNAI3P08754 354 aa17.39■□□□□ 0.37
SLIRP-210ENST00000557431 CT47B1P0C2W7 299 aaPredicted RBP17.39■□□□□ 0.37
SLIRP-210ENST00000557431 TRIM32Q13049 653 aa17.39■□□□□ 0.37
SLIRP-210ENST00000557431 MTX1Q13505 466 aa17.39■□□□□ 0.37
SLIRP-210ENST00000557431 TEX11Q8IYF3 940 aa17.39■□□□□ 0.37
SLIRP-210ENST00000557431 DIS3LQ8TF46 1054 aaKnown RBP17.39■□□□□ 0.37
SLIRP-210ENST00000557431 FRAT1Q92837 279 aaPredicted RBP17.39■□□□□ 0.37
SLIRP-210ENST00000557431 HTATIP2Q9BUP3 242 aa17.39■□□□□ 0.37
SLIRP-210ENST00000557431 SLC45A1Q9Y2W3 748 aa17.39■□□□□ 0.37
SLIRP-210ENST00000557431 ZBTB22O15209 634 aa17.38■□□□□ 0.37
SLIRP-210ENST00000557431 TFRCP02786 760 aaKnown RBP17.38■□□□□ 0.37
SLIRP-210ENST00000557431 TRIM27P14373 513 aa17.38■□□□□ 0.37
SLIRP-210ENST00000557431 ARID4AP29374 1257 aaPredicted RBP17.38■□□□□ 0.37
SLIRP-210ENST00000557431 JAG1P78504 1218 aa17.38■□□□□ 0.37
SLIRP-210ENST00000557431 HDAC5Q9UQL6 1122 aa17.38■□□□□ 0.37
SLIRP-210ENST00000557431 MYH8P13535 1937 aa17.38■□□□□ 0.37
SLIRP-210ENST00000557431 COL2A1P02458 1487 aaPredicted RBP17.37■□□□□ 0.37
SLIRP-210ENST00000557431 ZBTB7BO15156 539 aaPredicted RBP17.37■□□□□ 0.37
SLIRP-210ENST00000557431 TBC1D12O60347 775 aa17.37■□□□□ 0.37
SLIRP-210ENST00000557431 ZNF280CQ8ND82 737 aa17.37■□□□□ 0.37
SLIRP-210ENST00000557431 AATFQ9NY61 560 aaKnown RBP eCLIP17.37■□□□□ 0.37
SLIRP-210ENST00000557431 NAV1Q8NEY1 1877 aa17.36■□□□□ 0.37
SLIRP-210ENST00000557431 LDHCP07864 332 aa17.36■□□□□ 0.37
SLIRP-210ENST00000557431 CAP2P40123 477 aa17.36■□□□□ 0.37
SLIRP-210ENST00000557431 G3BP1Q13283 466 aaKnown RBP eCLIP17.36■□□□□ 0.37
SLIRP-210ENST00000557431 IRF5Q13568 498 aa17.36■□□□□ 0.37
SLIRP-210ENST00000557431 FAM110CQ1W6H9 321 aa17.36■□□□□ 0.37
SLIRP-210ENST00000557431 ADGRA1Q86SQ6 560 aa17.36■□□□□ 0.37
SLIRP-210ENST00000557431 MAPKAPK5Q8IW41 473 aa17.36■□□□□ 0.37
SLIRP-210ENST00000557431 PXYLP1Q8TE99 480 aa17.36■□□□□ 0.37
SLIRP-210ENST00000557431 COA7Q96BR5 231 aa17.36■□□□□ 0.37
SLIRP-210ENST00000557431 PAWRQ96IZ0 340 aaKnown RBP17.36■□□□□ 0.37
SLIRP-210ENST00000557431 ASCC2Q9H1I8 757 aaPredicted RBP17.36■□□□□ 0.37
SLIRP-210ENST00000557431 PRO3102Q9H379 93 aa17.36■□□□□ 0.37
SLIRP-210ENST00000557431 C1orf115Q9H7X2 142 aa17.36■□□□□ 0.37
SLIRP-210ENST00000557431 LRP2BPQ9P2M1 347 aa17.36■□□□□ 0.37
SLIRP-210ENST00000557431 GDF11O95390 407 aa17.35■□□□□ 0.37
SLIRP-210ENST00000557431 GNAI2P04899 355 aa17.35■□□□□ 0.37
SLIRP-210ENST00000557431 GSTO1P78417 241 aa17.35■□□□□ 0.37
SLIRP-210ENST00000557431 PROCA1Q8NCQ7 364 aaPredicted RBP17.35■□□□□ 0.37
SLIRP-210ENST00000557431 DBNDD2Q9BQY9 259 aa17.35■□□□□ 0.37
SLIRP-210ENST00000557431 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.35■□□□□ 0.37
SLIRP-210ENST00000557431 DNAJC18Q9H819 358 aa17.35■□□□□ 0.37
SLIRP-210ENST00000557431 PAK6Q9NQU5 681 aaPredicted RBP17.35■□□□□ 0.37
SLIRP-210ENST00000557431 PNMA3Q9UL41 463 aa17.35■□□□□ 0.37
SLIRP-210ENST00000557431 USP17L5A8MUK1 530 aa17.34■□□□□ 0.37
SLIRP-210ENST00000557431 SOX1O00570 391 aaPredicted RBP17.34■□□□□ 0.37
SLIRP-210ENST00000557431 EVI5O60447 810 aa17.34■□□□□ 0.37
SLIRP-210ENST00000557431 MTMR2Q13614 643 aa17.34■□□□□ 0.37
SLIRP-210ENST00000557431 TTC39AQ5SRH9 613 aa17.34■□□□□ 0.37
SLIRP-210ENST00000557431 TMEM57Q8N5G2 664 aa17.34■□□□□ 0.37
SLIRP-210ENST00000557431 TGFBRAP1Q8WUH2 860 aa17.34■□□□□ 0.37
SLIRP-210ENST00000557431 ARHGAP45Q92619 1136 aa17.34■□□□□ 0.37
SLIRP-210ENST00000557431 SAP30BPQ9UHR5 308 aaKnown RBP17.34■□□□□ 0.37
SLIRP-210ENST00000557431 NR2E3Q9Y5X4 410 aa17.34■□□□□ 0.37
SLIRP-210ENST00000557431 RANBP2P49792 3224 aaKnown RBP17.34■□□□□ 0.37
SLIRP-210ENST00000557431 NPM3O75607 178 aaKnown RBP17.33■□□□□ 0.36
SLIRP-210ENST00000557431 DYNLL1P63167 89 aaKnown RBP17.33■□□□□ 0.36
SLIRP-210ENST00000557431 ATF7IPQ6VMQ6 1270 aa17.33■□□□□ 0.36
SLIRP-210ENST00000557431 STAP2Q9UGK3 403 aa17.33■□□□□ 0.36
SLIRP-210ENST00000557431 GJD2Q9UKL4 321 aa17.33■□□□□ 0.36
SLIRP-210ENST00000557431 FLT1P17948 1338 aa17.32■□□□□ 0.36
SLIRP-210ENST00000557431 CYP2B6P20813 491 aa17.32■□□□□ 0.36
SLIRP-210ENST00000557431 TNNI3KQ59H18 835 aa17.32■□□□□ 0.36
SLIRP-210ENST00000557431 NAA16Q6N069 864 aaPredicted RBP17.32■□□□□ 0.36
SLIRP-210ENST00000557431 C7orf61Q8IZ16 206 aa17.32■□□□□ 0.36
SLIRP-210ENST00000557431 TRIB2Q92519 343 aa17.32■□□□□ 0.36
SLIRP-210ENST00000557431 LRCH3Q96II8 777 aa17.32■□□□□ 0.36
SLIRP-210ENST00000557431 CRISPLD2Q9H0B8 497 aa17.32■□□□□ 0.36
SLIRP-210ENST00000557431 TXNRD2Q9NNW7 524 aa17.32■□□□□ 0.36
SLIRP-210ENST00000557431 TLR7Q9NYK1 1049 aaKnown RBP17.32■□□□□ 0.36
SLIRP-210ENST00000557431 PALD1Q9ULE6 856 aa17.32■□□□□ 0.36
SLIRP-210ENST00000557431 ZMYND8Q9ULU4 1186 aaPredicted RBP17.32■□□□□ 0.36
SLIRP-210ENST00000557431 FPGT-TNNI3KV9GXZ4 949 aa17.32■□□□□ 0.36
SLIRP-210ENST00000557431 BAZ2AQ9UIF9 1905 aaKnown RBP17.31■□□□□ 0.36
SLIRP-210ENST00000557431 CYP2E1P05181 493 aaPredicted RBP17.31■□□□□ 0.36
SLIRP-210ENST00000557431 UQCRFS1P1P0C7P4 283 aa17.31■□□□□ 0.36
SLIRP-210ENST00000557431 ZAP70P43403 619 aa17.31■□□□□ 0.36
SLIRP-210ENST00000557431 GCLCP48506 637 aaPredicted RBP17.31■□□□□ 0.36
SLIRP-210ENST00000557431 OS9Q13438 667 aaPredicted RBP17.31■□□□□ 0.36
SLIRP-210ENST00000557431 SH3D19Q5HYK7 790 aa17.31■□□□□ 0.36
SLIRP-210ENST00000557431 P2RX7Q99572 595 aaKnown RBP17.31■□□□□ 0.36
SLIRP-210ENST00000557431 NOL10Q9BSC4 688 aaKnown RBP17.31■□□□□ 0.36
SLIRP-210ENST00000557431 AS3MTQ9HBK9 375 aa17.31■□□□□ 0.36
SLIRP-210ENST00000557431 PIH1D3Q9NQM4 214 aaKnown RBP17.31■□□□□ 0.36
SLIRP-210ENST00000557431 NDUFB9Q9Y6M9 179 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms