RNA–Protein interactions for RNA: ENST00000557273.5

RDH11-209, Transcript of retinol dehydrogenase 11, humanhuman

TSL 3

Gene RDH11, Length 562 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-209ENST00000557273 MECOMQ03112 1051 aa12.52□□□□□ -0.41
RDH11-209ENST00000557273 ERICH6Q7L0X2 663 aa12.52□□□□□ -0.41
RDH11-209ENST00000557273 PLXNB2O15031 1838 aa12.51□□□□□ -0.41
RDH11-209ENST00000557273 TRIM75PA6NK02 468 aa12.51□□□□□ -0.41
RDH11-209ENST00000557273 SRGAP3O43295 1099 aa12.51□□□□□ -0.41
RDH11-209ENST00000557273 LDHCP07864 332 aa12.51□□□□□ -0.41
RDH11-209ENST00000557273 GNAI3P08754 354 aa12.51□□□□□ -0.41
RDH11-209ENST00000557273 SLURP2P0DP57 97 aa12.51□□□□□ -0.41
RDH11-209ENST00000557273 ELNP15502 786 aa12.51□□□□□ -0.41
RDH11-209ENST00000557273 ARID4AP29374 1257 aaPredicted RBP12.51□□□□□ -0.41
RDH11-209ENST00000557273 GCLCP48506 637 aaPredicted RBP12.51□□□□□ -0.41
RDH11-209ENST00000557273 GSTO1P78417 241 aa12.51□□□□□ -0.41
RDH11-209ENST00000557273 PICALMQ13492 652 aa12.51□□□□□ -0.41
RDH11-209ENST00000557273 COA7Q96BR5 231 aa12.51□□□□□ -0.41
RDH11-209ENST00000557273 NSUN4Q96CB9 384 aaKnown RBP12.51□□□□□ -0.41
RDH11-209ENST00000557273 LAMA3Q16787 3333 aa12.51□□□□□ -0.41
RDH11-209ENST00000557273 KCNA4P22459 653 aa12.5□□□□□ -0.41
RDH11-209ENST00000557273 TFCP2Q12800 502 aa12.5□□□□□ -0.41
RDH11-209ENST00000557273 SH3D19Q5HYK7 790 aa12.5□□□□□ -0.41
RDH11-209ENST00000557273 TREML2Q5T2D2 321 aa12.5□□□□□ -0.41
RDH11-209ENST00000557273 ANKRD13CQ8N6S4 541 aa12.5□□□□□ -0.41
RDH11-209ENST00000557273 SPATA5Q8NB90 893 aa12.5□□□□□ -0.41
RDH11-209ENST00000557273 ZNF280CQ8ND82 737 aa12.5□□□□□ -0.41
RDH11-209ENST00000557273 HMG20BQ9P0W2 317 aa12.5□□□□□ -0.41
RDH11-209ENST00000557273 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.5□□□□□ -0.41
RDH11-209ENST00000557273 HERC5Q9UII4 1024 aaKnown RBP12.5□□□□□ -0.41
RDH11-209ENST00000557273 IGSF3O75054 1194 aa12.49□□□□□ -0.41
RDH11-209ENST00000557273 CAP2P40123 477 aa12.49□□□□□ -0.41
RDH11-209ENST00000557273 RARSP54136 660 aaKnown RBP12.49□□□□□ -0.41
RDH11-209ENST00000557273 PABPC4Q13310 644 aaKnown RBP eCLIP12.49□□□□□ -0.41
RDH11-209ENST00000557273 ANKLE1Q8NAG6 615 aa12.49□□□□□ -0.41
RDH11-209ENST00000557273 DEFB118Q96PH6 123 aa12.49□□□□□ -0.41
RDH11-209ENST00000557273 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.49□□□□□ -0.41
RDH11-209ENST00000557273 USP17L5A8MUK1 530 aa12.48□□□□□ -0.41
RDH11-209ENST00000557273 EVI5O60447 810 aa12.48□□□□□ -0.41
RDH11-209ENST00000557273 HMGCRP04035 888 aa12.48□□□□□ -0.41
RDH11-209ENST00000557273 SPP2Q13103 211 aa12.48□□□□□ -0.41
RDH11-209ENST00000557273 CCDC84Q86UT8 332 aaPredicted RBP12.48□□□□□ -0.41
RDH11-209ENST00000557273 WDR18Q9BV38 432 aa12.48□□□□□ -0.41
RDH11-209ENST00000557273 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.48□□□□□ -0.41
RDH11-209ENST00000557273 AS3MTQ9HBK9 375 aa12.48□□□□□ -0.41
RDH11-209ENST00000557273 MORF4L1Q9UBU8 362 aa12.48□□□□□ -0.41
RDH11-209ENST00000557273 GJD2Q9UKL4 321 aa12.48□□□□□ -0.41
RDH11-209ENST00000557273 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.48□□□□□ -0.41
RDH11-209ENST00000557273 DDX60LQ5H9U9 1706 aaKnown RBP12.48□□□□□ -0.41
RDH11-209ENST00000557273 MYO5AQ9Y4I1 1855 aaKnown RBP12.47□□□□□ -0.41
RDH11-209ENST00000557273 FAM196BA6NMK8 535 aa12.47□□□□□ -0.41
RDH11-209ENST00000557273 TFRCP02786 760 aaKnown RBP12.47□□□□□ -0.41
RDH11-209ENST00000557273 UQCRFS1P1P0C7P4 283 aa12.47□□□□□ -0.41
RDH11-209ENST00000557273 HMGCS2P54868 508 aa12.47□□□□□ -0.41
RDH11-209ENST00000557273 RRP1BQ14684 758 aaKnown RBP12.47□□□□□ -0.41
RDH11-209ENST00000557273 PI16Q6UXB8 463 aa12.47□□□□□ -0.41
RDH11-209ENST00000557273 METTL16Q86W50 562 aaKnown RBP12.47□□□□□ -0.41
RDH11-209ENST00000557273 DHX36Q9H2U1 1008 aaKnown RBP12.47□□□□□ -0.41
RDH11-209ENST00000557273 GINM1Q9NU53 330 aa12.47□□□□□ -0.41
RDH11-209ENST00000557273 PI4KBQ9UBF8 816 aa12.47□□□□□ -0.41
RDH11-209ENST00000557273 ASNSP08243 561 aa12.46□□□□□ -0.41
RDH11-209ENST00000557273 PLCG2P16885 1265 aa12.46□□□□□ -0.41
RDH11-209ENST00000557273 HOXA7P31268 230 aaPredicted RBP12.46□□□□□ -0.41
RDH11-209ENST00000557273 MCAMP43121 646 aa12.46□□□□□ -0.41
RDH11-209ENST00000557273 PPP4CP60510 307 aa12.46□□□□□ -0.41
RDH11-209ENST00000557273 TBC1D9Q6ZT07 1266 aa12.46□□□□□ -0.41
RDH11-209ENST00000557273 NECAB2Q7Z6G3 386 aa12.46□□□□□ -0.41
RDH11-209ENST00000557273 TEX11Q8IYF3 940 aa12.46□□□□□ -0.41
RDH11-209ENST00000557273 NEUROD6Q96NK8 337 aa12.46□□□□□ -0.41
RDH11-209ENST00000557273 ASCC2Q9H1I8 757 aaPredicted RBP12.46□□□□□ -0.41
RDH11-209ENST00000557273 GPR108Q9NPR9 543 aa12.46□□□□□ -0.41
RDH11-209ENST00000557273 RPTORQ8N122 1335 aa12.45□□□□□ -0.42
RDH11-209ENST00000557273 GNAI2P04899 355 aa12.45□□□□□ -0.42
RDH11-209ENST00000557273 BMP8BP34820 402 aa12.45□□□□□ -0.42
RDH11-209ENST00000557273 BACE1P56817 501 aa12.45□□□□□ -0.42
RDH11-209ENST00000557273 GORABQ5T7V8 394 aa12.45□□□□□ -0.42
RDH11-209ENST00000557273 MAP3K21Q5TCX8 1036 aa12.45□□□□□ -0.42
RDH11-209ENST00000557273 PAWRQ96IZ0 340 aaKnown RBP12.45□□□□□ -0.42
RDH11-209ENST00000557273 RAI14Q9P0K7 980 aa12.45□□□□□ -0.42
RDH11-209ENST00000557273 MYH1P12882 1939 aa12.45□□□□□ -0.42
RDH11-209ENST00000557273 PNMA6EA0A0J9YXQ4 647 aa12.44□□□□□ -0.42
RDH11-209ENST00000557273 C19orf81C9J6K1 198 aa12.44□□□□□ -0.42
RDH11-209ENST00000557273 IPO8O15397 1037 aaKnown RBP12.44□□□□□ -0.42
RDH11-209ENST00000557273 BAG3O95817 575 aa12.44□□□□□ -0.42
RDH11-209ENST00000557273 XRCC5P13010 732 aaKnown RBP12.44□□□□□ -0.42
RDH11-209ENST00000557273 TRIM27P14373 513 aa12.44□□□□□ -0.42
RDH11-209ENST00000557273 MNX1P50219 401 aaPredicted RBP12.44□□□□□ -0.42
RDH11-209ENST00000557273 GPR153Q6NV75 609 aa12.44□□□□□ -0.42
RDH11-209ENST00000557273 ATF7IPQ6VMQ6 1270 aa12.44□□□□□ -0.42
RDH11-209ENST00000557273 SH3RF3Q8TEJ3 882 aaPredicted RBP12.44□□□□□ -0.42
RDH11-209ENST00000557273 DIS3LQ8TF46 1054 aaKnown RBP12.44□□□□□ -0.42
RDH11-209ENST00000557273 SOCS4Q8WXH5 440 aa12.44□□□□□ -0.42
RDH11-209ENST00000557273 ZNF512BQ96KM6 892 aaPredicted RBP12.44□□□□□ -0.42
RDH11-209ENST00000557273 GDF15Q99988 308 aa12.44□□□□□ -0.42
RDH11-209ENST00000557273 DNAJC18Q9H819 358 aa12.44□□□□□ -0.42
RDH11-209ENST00000557273 HMX1Q9NP08 348 aaPredicted RBP12.44□□□□□ -0.42
RDH11-209ENST00000557273 LRP2BPQ9P2M1 347 aa12.44□□□□□ -0.42
RDH11-209ENST00000557273 OGDHLQ9ULD0 1010 aa12.44□□□□□ -0.42
RDH11-209ENST00000557273 FRMPD3Q5JV73 1810 aa12.44□□□□□ -0.42
RDH11-209ENST00000557273 FLT1P17948 1338 aa12.43□□□□□ -0.42
RDH11-209ENST00000557273 IRX3P78415 501 aaPredicted RBP12.43□□□□□ -0.42
RDH11-209ENST00000557273 G3BP1Q13283 466 aaKnown RBP eCLIP12.43□□□□□ -0.42
RDH11-209ENST00000557273 MTMR2Q13614 643 aa12.43□□□□□ -0.42
RDH11-209ENST00000557273 FOXP4Q8IVH2 680 aaPredicted RBP12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms