RNA–Protein interactions for RNA: ENST00000557258.5

FOXN3-214, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 2,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-214ENST00000557258 ZRSR1Q15695 479 aaKnown RBP22.3■■□□□ 1.16
FOXN3-214ENST00000557258 VPS72Q15906 364 aa22.3■■□□□ 1.16
FOXN3-214ENST00000557258 KIAA1468Q9P260 1216 aa22.3■■□□□ 1.16
FOXN3-214ENST00000557258 BAZ2AQ9UIF9 1905 aaKnown RBP22.3■■□□□ 1.16
FOXN3-214ENST00000557258 FAM47AQ5JRC9 791 aa22.3■■□□□ 1.16
FOXN3-214ENST00000557258 KIAA1524Q8TCG1 905 aa22.3■■□□□ 1.16
FOXN3-214ENST00000557258 ARID3AQ99856 593 aa22.3■■□□□ 1.16
FOXN3-214ENST00000557258 FAM205CA6NFA0 338 aa22.29■■□□□ 1.16
FOXN3-214ENST00000557258 SLC3A2P08195 630 aaKnown RBP22.29■■□□□ 1.16
FOXN3-214ENST00000557258 CEP57L1Q8IYX8 460 aa22.29■■□□□ 1.16
FOXN3-214ENST00000557258 ENAHQ8N8S7 591 aaPredicted RBP22.29■■□□□ 1.16
FOXN3-214ENST00000557258 FANCBQ8NB91 859 aa22.29■■□□□ 1.16
FOXN3-214ENST00000557258 MAP3K14Q99558 947 aa22.29■■□□□ 1.16
FOXN3-214ENST00000557258 RTCBQ9Y3I0 505 aaKnown RBP22.29■■□□□ 1.16
FOXN3-214ENST00000557258 CHD4Q14839 1912 aa22.29■■□□□ 1.16
FOXN3-214ENST00000557258 PNOCQ13519 176 aa22.29■■□□□ 1.16
FOXN3-214ENST00000557258 PTPAQ15257 358 aa22.29■■□□□ 1.16
FOXN3-214ENST00000557258 IFNAR1P17181 557 aa22.28■■□□□ 1.16
FOXN3-214ENST00000557258 SYKP43405 635 aa22.28■■□□□ 1.16
FOXN3-214ENST00000557258 TRIM22Q8IYM9 498 aa22.28■■□□□ 1.16
FOXN3-214ENST00000557258 BCL11BQ9C0K0 894 aaPredicted RBP22.28■■□□□ 1.16
FOXN3-214ENST00000557258 VPS54Q9P1Q0 977 aa22.28■■□□□ 1.16
FOXN3-214ENST00000557258 COL5A3P25940 1745 aaPredicted RBP22.28■■□□□ 1.16
FOXN3-214ENST00000557258 RPS6KA4O75676 772 aa22.28■■□□□ 1.16
FOXN3-214ENST00000557258 PLEKHA8P1O95397 391 aa22.28■■□□□ 1.16
FOXN3-214ENST00000557258 CACTINQ8WUQ7 758 aaKnown RBP22.28■■□□□ 1.16
FOXN3-214ENST00000557258 NSUN4Q96CB9 384 aaKnown RBP22.28■■□□□ 1.16
FOXN3-214ENST00000557258 SHISA4Q96DD7 197 aa22.28■■□□□ 1.16
FOXN3-214ENST00000557258 FAM13BQ9NYF5 915 aa22.28■■□□□ 1.16
FOXN3-214ENST00000557258 RREB1Q92766 1687 aa22.28■■□□□ 1.16
FOXN3-214ENST00000557258 CNTNAP4Q9C0A0 1308 aa22.28■■□□□ 1.16
FOXN3-214ENST00000557258 FOXN1O15353 648 aa22.27■■□□□ 1.16
FOXN3-214ENST00000557258 HIBADHP31937 336 aaKnown RBP22.27■■□□□ 1.16
FOXN3-214ENST00000557258 TOB1P50616 345 aaPredicted RBP22.27■■□□□ 1.16
FOXN3-214ENST00000557258 PTPN21Q16825 1174 aa22.27■■□□□ 1.16
FOXN3-214ENST00000557258 CTR9Q6PD62 1173 aa22.27■■□□□ 1.16
FOXN3-214ENST00000557258 NBPF11Q86T75 865 aa22.27■■□□□ 1.16
FOXN3-214ENST00000557258 NOSTRINQ8IVI9 506 aa22.27■■□□□ 1.16
FOXN3-214ENST00000557258 CRACR2BQ8N4Y2 399 aaPredicted RBP22.27■■□□□ 1.16
FOXN3-214ENST00000557258 ESR2Q92731 530 aa22.27■■□□□ 1.16
FOXN3-214ENST00000557258 TPM2P07951 284 aa22.27■■□□□ 1.16
FOXN3-214ENST00000557258 CMA1P23946 247 aa22.27■■□□□ 1.16
FOXN3-214ENST00000557258 U2AF2P26368 475 aaKnown RBP eCLIP22.27■■□□□ 1.161e-6■■■□□ 15.1
FOXN3-214ENST00000557258 TPTE2Q6XPS3 522 aa22.27■■□□□ 1.16
FOXN3-214ENST00000557258 RNF41Q9H4P4 317 aaPredicted RBP22.27■■□□□ 1.16
FOXN3-214ENST00000557258 ANKIB1Q9P2G1 1089 aa22.27■■□□□ 1.16
FOXN3-214ENST00000557258 MMP1P03956 469 aa22.26■■□□□ 1.15
FOXN3-214ENST00000557258 NFIXQ14938 502 aa22.26■■□□□ 1.15
FOXN3-214ENST00000557258 MTMR7Q9Y216 660 aa22.26■■□□□ 1.15
FOXN3-214ENST00000557258 PCDHB6Q9Y5E3 794 aa22.26■■□□□ 1.15
FOXN3-214ENST00000557258 ECM29Q5VYK3 1845 aa22.26■■□□□ 1.15
FOXN3-214ENST00000557258 HSP90AA4PQ58FG1 418 aa22.25■■□□□ 1.15
FOXN3-214ENST00000557258 FBXO33Q7Z6M2 555 aa22.25■■□□□ 1.15
FOXN3-214ENST00000557258 ZSCAN10Q96SZ4 725 aaPredicted RBP22.25■■□□□ 1.15
FOXN3-214ENST00000557258 SEC23AQ15436 765 aa22.25■■□□□ 1.15
FOXN3-214ENST00000557258 LONRF3Q496Y0 759 aa22.25■■□□□ 1.15
FOXN3-214ENST00000557258 NOM1Q5C9Z4 860 aaKnown RBP22.25■■□□□ 1.15
FOXN3-214ENST00000557258 IFIT1BQ5T764 474 aaKnown RBP22.25■■□□□ 1.15
FOXN3-214ENST00000557258 PDILTQ8N807 584 aa22.25■■□□□ 1.15
FOXN3-214ENST00000557258 CABP5Q9NP86 173 aa22.25■■□□□ 1.15
FOXN3-214ENST00000557258 MYH2Q9UKX2 1941 aa22.25■■□□□ 1.15
FOXN3-214ENST00000557258 RFC4P35249 363 aa22.24■■□□□ 1.15
FOXN3-214ENST00000557258 FAM196AQ6ZSG2 479 aa22.24■■□□□ 1.15
FOXN3-214ENST00000557258 BCORQ6W2J9 1755 aa22.24■■□□□ 1.15
FOXN3-214ENST00000557258 GRIK5Q16478 980 aa22.24■■□□□ 1.15
FOXN3-214ENST00000557258 EARS2Q5JPH6 523 aaKnown RBP22.24■■□□□ 1.15
FOXN3-214ENST00000557258 C16orf45Q96MC5 204 aaPredicted RBP22.24■■□□□ 1.15
FOXN3-214ENST00000557258 NYXQ9GZU5 481 aa22.24■■□□□ 1.15
FOXN3-214ENST00000557258 V9GY48 417 aaPredicted RBP22.24■■□□□ 1.15
FOXN3-214ENST00000557258 CACNA1SQ13698 1873 aa22.24■■□□□ 1.15
FOXN3-214ENST00000557258 SAFBQ15424 915 aaKnown RBP eCLIP22.24■■□□□ 1.15
FOXN3-214ENST00000557258 DIXDC1Q155Q3 683 aa22.24■■□□□ 1.15
FOXN3-214ENST00000557258 SLC10A5Q5PT55 438 aa22.24■■□□□ 1.15
FOXN3-214ENST00000557258 KLHL34Q8N239 644 aa22.24■■□□□ 1.15
FOXN3-214ENST00000557258 LMOD1P29536 600 aaPredicted RBP22.23■■□□□ 1.15
FOXN3-214ENST00000557258 TM4SF1P30408 202 aa22.23■■□□□ 1.15
FOXN3-214ENST00000557258 GRAMD1CQ8IYS0 662 aa22.23■■□□□ 1.15
FOXN3-214ENST00000557258 LAMB2P55268 1798 aa22.23■■□□□ 1.15
FOXN3-214ENST00000557258 SMC2O95347 1197 aa22.23■■□□□ 1.15
FOXN3-214ENST00000557258 USP49Q70CQ1 688 aa22.23■■□□□ 1.15
FOXN3-214ENST00000557258 DCP1AQ9NPI6 582 aaPredicted RBP22.23■■□□□ 1.15
FOXN3-214ENST00000557258 SPTLC3Q9NUV7 552 aa22.23■■□□□ 1.15
FOXN3-214ENST00000557258 USP17L8P0C7I0 530 aa22.22■■□□□ 1.15
FOXN3-214ENST00000557258 DEXIO95424 95 aa22.22■■□□□ 1.15
FOXN3-214ENST00000557258 VEGFAP15692 232 aaPredicted RBP22.22■■□□□ 1.15
FOXN3-214ENST00000557258 NAT10Q9H0A0 1025 aaKnown RBP22.22■■□□□ 1.15
FOXN3-214ENST00000557258 WNT7AO00755 349 aa22.21■■□□□ 1.15
FOXN3-214ENST00000557258 ATP1A3P13637 1013 aa22.21■■□□□ 1.15
FOXN3-214ENST00000557258 DZIP1Q86YF9 867 aaKnown RBP22.21■■□□□ 1.15
FOXN3-214ENST00000557258 LRRC4BQ9NT99 713 aa22.21■■□□□ 1.15
FOXN3-214ENST00000557258 KCNH3Q9ULD8 1083 aa22.21■■□□□ 1.15
FOXN3-214ENST00000557258 TIAM2Q8IVF5 1701 aa22.21■■□□□ 1.15
FOXN3-214ENST00000557258 STK36Q9NRP7 1315 aa22.21■■□□□ 1.15
FOXN3-214ENST00000557258 CAVIN2O95810 425 aa22.21■■□□□ 1.15
FOXN3-214ENST00000557258 MCM9Q9NXL9 1143 aa22.21■■□□□ 1.15
FOXN3-214ENST00000557258 CASZ1Q86V15 1759 aa22.21■■□□□ 1.15
FOXN3-214ENST00000557258 AKAP17AQ02040 695 aaKnown RBP22.2■■□□□ 1.14
FOXN3-214ENST00000557258 METTL16Q86W50 562 aaKnown RBP22.2■■□□□ 1.14
FOXN3-214ENST00000557258 FOXP4Q8IVH2 680 aaPredicted RBP22.2■■□□□ 1.14
FOXN3-214ENST00000557258 JMYQ8N9B5 988 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms