RNA–Protein interactions for RNA: ENST00000556958.5

ATXN3-245, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-245ENST00000556958 PRUNE2Q8WUY3 3088 aa7.46□□□□□ -1.22
ATXN3-245ENST00000556958 DPYSL4O14531 572 aa7.45□□□□□ -1.22
ATXN3-245ENST00000556958 CXCL11O14625 94 aa7.45□□□□□ -1.22
ATXN3-245ENST00000556958 SEMA3EO15041 775 aa7.45□□□□□ -1.22
ATXN3-245ENST00000556958 CYP2C8P10632 490 aa7.45□□□□□ -1.22
ATXN3-245ENST00000556958 CC2D1BQ5T0F9 858 aaKnown RBP7.45□□□□□ -1.22
ATXN3-245ENST00000556958 CERS5Q8N5B7 392 aa7.45□□□□□ -1.22
ATXN3-245ENST00000556958 SMCR8Q8TEV9 937 aaPredicted RBP7.45□□□□□ -1.22
ATXN3-245ENST00000556958 CCDC85AQ96PX6 553 aaPredicted RBP7.45□□□□□ -1.22
ATXN3-245ENST00000556958 SERPINA10Q9UK55 444 aa7.45□□□□□ -1.22
ATXN3-245ENST00000556958 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.44□□□□□ -1.22
ATXN3-245ENST00000556958 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.44□□□□□ -1.22
ATXN3-245ENST00000556958 PCCAP05165 728 aaPredicted RBP7.44□□□□□ -1.22
ATXN3-245ENST00000556958 IGHMBP2P38935 993 aaKnown RBP7.44□□□□□ -1.22
ATXN3-245ENST00000556958 C6orf132Q5T0Z8 1188 aa7.44□□□□□ -1.22
ATXN3-245ENST00000556958 DZIP1LQ8IYY4 767 aaKnown RBP7.44□□□□□ -1.22
ATXN3-245ENST00000556958 ZNF341Q9BYN7 854 aa7.44□□□□□ -1.22
ATXN3-245ENST00000556958 ZNF576Q9H609 170 aa7.44□□□□□ -1.22
ATXN3-245ENST00000556958 EPHX3Q9H6B9 360 aa7.44□□□□□ -1.22
ATXN3-245ENST00000556958 EMILIN3Q9NT22 766 aa7.44□□□□□ -1.22
ATXN3-245ENST00000556958 BABAM1Q9NWV8 329 aa7.44□□□□□ -1.22
ATXN3-245ENST00000556958 SLC45A1Q9Y2W3 748 aa7.44□□□□□ -1.22
ATXN3-245ENST00000556958 NCOR1O75376 2440 aa7.43□□□□□ -1.22
ATXN3-245ENST00000556958 BMP1P13497 986 aa7.43□□□□□ -1.22
ATXN3-245ENST00000556958 C9orf50Q5SZB4 431 aa7.43□□□□□ -1.22
ATXN3-245ENST00000556958 GPAT2Q6NUI2 795 aa7.43□□□□□ -1.22
ATXN3-245ENST00000556958 ZNF804AQ7Z570 1209 aa7.43□□□□□ -1.22
ATXN3-245ENST00000556958 TRMT44Q8IYL2 757 aaKnown RBP7.43□□□□□ -1.22
ATXN3-245ENST00000556958 CCDC191Q8NCU4 936 aa7.43□□□□□ -1.22
ATXN3-245ENST00000556958 SENP6Q9GZR1 1112 aaPredicted RBP7.43□□□□□ -1.22
ATXN3-245ENST00000556958 TMOD2Q9NZR1 351 aa7.43□□□□□ -1.22
ATXN3-245ENST00000556958 CXXC1Q9P0U4 656 aaPredicted RBP7.43□□□□□ -1.22
ATXN3-245ENST00000556958 LRRC37AA6NMS7 1700 aa7.43□□□□□ -1.22
ATXN3-245ENST00000556958 MUC6Q6W4X9 2439 aa7.42□□□□□ -1.22
ATXN3-245ENST00000556958 SMIM22K7EJ46 135 aa7.42□□□□□ -1.22
ATXN3-245ENST00000556958 IL1R1P14778 569 aa7.42□□□□□ -1.22
ATXN3-245ENST00000556958 MOGSQ13724 837 aa7.42□□□□□ -1.22
ATXN3-245ENST00000556958 PKDCCQ504Y2 493 aa7.42□□□□□ -1.22
ATXN3-245ENST00000556958 RNPC3Q96LT9 517 aaKnown RBP7.42□□□□□ -1.22
ATXN3-245ENST00000556958 MPHOSPH8Q99549 860 aa7.42□□□□□ -1.22
ATXN3-245ENST00000556958 KCNH6Q9H252 994 aa7.42□□□□□ -1.22
ATXN3-245ENST00000556958 HYPKQ9NX55 129 aa7.42□□□□□ -1.22
ATXN3-245ENST00000556958 DBF4Q9UBU7 674 aaPredicted RBP7.42□□□□□ -1.22
ATXN3-245ENST00000556958 SCN9AQ15858 1988 aa7.42□□□□□ -1.22
ATXN3-245ENST00000556958 DDX60Q8IY21 1712 aaKnown RBP7.41□□□□□ -1.22
ATXN3-245ENST00000556958 LAMA2P24043 3122 aaKnown RBP7.41□□□□□ -1.22
ATXN3-245ENST00000556958 DGAT1O75907 488 aa7.41□□□□□ -1.22
ATXN3-245ENST00000556958 DNAJB2P25686 324 aa7.41□□□□□ -1.22
ATXN3-245ENST00000556958 CTSWP56202 376 aa7.41□□□□□ -1.22
ATXN3-245ENST00000556958 CCDC85BQ15834 202 aaPredicted RBP7.41□□□□□ -1.22
ATXN3-245ENST00000556958 FAM110CQ1W6H9 321 aa7.41□□□□□ -1.22
ATXN3-245ENST00000556958 MAP3K21Q5TCX8 1036 aa7.41□□□□□ -1.22
ATXN3-245ENST00000556958 FKBP1CQ5VVH2 108 aa7.41□□□□□ -1.22
ATXN3-245ENST00000556958 C15orf52Q6ZUT6 534 aaKnown RBP7.41□□□□□ -1.22
ATXN3-245ENST00000556958 FAM83AQ86UY5 434 aa7.41□□□□□ -1.22
ATXN3-245ENST00000556958 ANKRD13CQ8N6S4 541 aa7.41□□□□□ -1.22
ATXN3-245ENST00000556958 TTLL11Q8NHH1 800 aa7.41□□□□□ -1.22
ATXN3-245ENST00000556958 BADQ92934 168 aa7.41□□□□□ -1.22
ATXN3-245ENST00000556958 TIFAQ96CG3 184 aa7.41□□□□□ -1.22
ATXN3-245ENST00000556958 NECAB3Q96P71 396 aaPredicted RBP7.41□□□□□ -1.22
ATXN3-245ENST00000556958 CWC25Q9NXE8 425 aaPredicted RBP7.41□□□□□ -1.22
ATXN3-245ENST00000556958 GJD2Q9UKL4 321 aa7.41□□□□□ -1.22
ATXN3-245ENST00000556958 TIMELESSQ9UNS1 1208 aa7.41□□□□□ -1.22
ATXN3-245ENST00000556958 TTF2Q9UNY4 1162 aaKnown RBP7.41□□□□□ -1.22
ATXN3-245ENST00000556958 AOX1Q06278 1338 aa7.41□□□□□ -1.22
ATXN3-245ENST00000556958 EYSQ5T1H1 3165 aa7.41□□□□□ -1.22
ATXN3-245ENST00000556958 SIPA1L3O60292 1781 aaPredicted RBP7.41□□□□□ -1.22
ATXN3-245ENST00000556958 NUP98P52948 1817 aa7.41□□□□□ -1.22
ATXN3-245ENST00000556958 PER1O15534 1290 aaPredicted RBP7.4□□□□□ -1.22
ATXN3-245ENST00000556958 XRCC5P13010 732 aaKnown RBP7.4□□□□□ -1.22
ATXN3-245ENST00000556958 IGFBP4P22692 258 aa7.4□□□□□ -1.22
ATXN3-245ENST00000556958 KLRK1P26718 216 aa7.4□□□□□ -1.22
ATXN3-245ENST00000556958 INPP5BP32019 993 aa7.4□□□□□ -1.22
ATXN3-245ENST00000556958 GCLCP48506 637 aaPredicted RBP7.4□□□□□ -1.22
ATXN3-245ENST00000556958 RTP1P59025 263 aa7.4□□□□□ -1.22
ATXN3-245ENST00000556958 TRIM32Q13049 653 aa7.4□□□□□ -1.22
ATXN3-245ENST00000556958 NFE2L2Q16236 605 aa7.4□□□□□ -1.22
ATXN3-245ENST00000556958 NOL9Q5SY16 702 aaKnown RBP7.4□□□□□ -1.22
ATXN3-245ENST00000556958 GADL1Q6ZQY3 521 aa7.4□□□□□ -1.22
ATXN3-245ENST00000556958 MIGA2Q7L4E1 593 aa7.4□□□□□ -1.22
ATXN3-245ENST00000556958 PNNQ9H307 717 aaKnown RBP7.4□□□□□ -1.22
ATXN3-245ENST00000556958 CHPF2Q9P2E5 772 aa7.4□□□□□ -1.22
ATXN3-245ENST00000556958 ZNF112Q9UJU3 913 aa7.4□□□□□ -1.22
ATXN3-245ENST00000556958 PNMA3Q9UL41 463 aa7.4□□□□□ -1.22
ATXN3-245ENST00000556958 ANKRD36CQ5JPF3 1778 aa7.4□□□□□ -1.23
ATXN3-245ENST00000556958 A0A0G2JLL6 359 aaPredicted RBP7.39□□□□□ -1.23
ATXN3-245ENST00000556958 PRR33A8MZF0 331 aa7.39□□□□□ -1.23
ATXN3-245ENST00000556958 MSCO60682 206 aa7.39□□□□□ -1.23
ATXN3-245ENST00000556958 HSPA5P11021 654 aaKnown RBP7.39□□□□□ -1.23
ATXN3-245ENST00000556958 CRKP46108 304 aa7.39□□□□□ -1.23
ATXN3-245ENST00000556958 HDLBPQ00341 1268 aaKnown RBP7.39□□□□□ -1.23
ATXN3-245ENST00000556958 NHLH1Q02575 133 aa7.39□□□□□ -1.23
ATXN3-245ENST00000556958 MFSD14BQ5SR56 506 aa7.39□□□□□ -1.23
ATXN3-245ENST00000556958 HDGFL1Q5TGJ6 251 aa7.39□□□□□ -1.23
ATXN3-245ENST00000556958 SMYD5Q6GMV2 418 aa7.39□□□□□ -1.23
ATXN3-245ENST00000556958 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.39□□□□□ -1.23
ATXN3-245ENST00000556958 PRRT2Q7Z6L0 340 aaPredicted RBP7.39□□□□□ -1.23
ATXN3-245ENST00000556958 TRIB2Q92519 343 aa7.39□□□□□ -1.23
ATXN3-245ENST00000556958 NUDT12Q9BQG2 462 aa7.39□□□□□ -1.23
ATXN3-245ENST00000556958 GREM2Q9H772 168 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms