RNA–Protein interactions for RNA: ENST00000556951.5

PSEN1-219, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-219ENST00000556951 ZHX2Q9Y6X8 837 aa15.82■□□□□ 0.12
PSEN1-219ENST00000556951 RARSP54136 660 aaKnown RBP15.81■□□□□ 0.12
PSEN1-219ENST00000556951 SLC4A10Q6U841 1118 aa15.81■□□□□ 0.12
PSEN1-219ENST00000556951 SH3BP5LQ7L8J4 393 aa15.81■□□□□ 0.12
PSEN1-219ENST00000556951 KIF16BQ96L93 1317 aa15.81■□□□□ 0.12
PSEN1-219ENST00000556951 THEGQ9P2T0 379 aa15.81■□□□□ 0.12
PSEN1-219ENST00000556951 SLC45A1Q9Y2W3 748 aa15.81■□□□□ 0.12
PSEN1-219ENST00000556951 PFASO15067 1338 aa15.8■□□□□ 0.12
PSEN1-219ENST00000556951 MRPS5P82675 430 aaKnown RBP15.8■□□□□ 0.12
PSEN1-219ENST00000556951 SMAD3P84022 425 aaKnown RBP15.8■□□□□ 0.12
PSEN1-219ENST00000556951 FASTKD5Q7L8L6 764 aaKnown RBP15.8■□□□□ 0.12
PSEN1-219ENST00000556951 WDR66Q8TBY9 1149 aa15.8■□□□□ 0.12
PSEN1-219ENST00000556951 USP40Q9NVE5 1235 aa15.8■□□□□ 0.12
PSEN1-219ENST00000556951 TCF20Q9UGU0 1960 aaKnown RBP15.8■□□□□ 0.12
PSEN1-219ENST00000556951 TNPO2O14787 897 aaKnown RBP15.79■□□□□ 0.12
PSEN1-219ENST00000556951 PRDX5P30044 214 aa15.79■□□□□ 0.12
PSEN1-219ENST00000556951 TMEM31Q5JXX7 168 aa15.79■□□□□ 0.12
PSEN1-219ENST00000556951 SCYL3Q8IZE3 742 aa15.79■□□□□ 0.12
PSEN1-219ENST00000556951 LBHD1Q9BQE6 289 aaPredicted RBP15.79■□□□□ 0.12
PSEN1-219ENST00000556951 IFIT1P09914 478 aaKnown RBP15.78■□□□□ 0.12
PSEN1-219ENST00000556951 RFX5P48382 616 aaPredicted RBP15.78■□□□□ 0.12
PSEN1-219ENST00000556951 IRX6P78412 446 aaPredicted RBP15.78■□□□□ 0.12
PSEN1-219ENST00000556951 GADL1Q6ZQY3 521 aa15.78■□□□□ 0.12
PSEN1-219ENST00000556951 GJD2Q9UKL4 321 aa15.78■□□□□ 0.12
PSEN1-219ENST00000556951 AK9Q5TCS8 1911 aa15.77■□□□□ 0.12
PSEN1-219ENST00000556951 BCAR3O75815 825 aa15.77■□□□□ 0.12
PSEN1-219ENST00000556951 TRIM32Q13049 653 aa15.77■□□□□ 0.12
PSEN1-219ENST00000556951 PUM3Q15397 648 aaKnown RBP15.77■□□□□ 0.12
PSEN1-219ENST00000556951 CCDC84Q86UT8 332 aaPredicted RBP15.77■□□□□ 0.12
PSEN1-219ENST00000556951 IDI2Q9BXS1 227 aa15.77■□□□□ 0.12
PSEN1-219ENST00000556951 EPHX3Q9H6B9 360 aa15.77■□□□□ 0.12
PSEN1-219ENST00000556951 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.77■□□□□ 0.12
PSEN1-219ENST00000556951 LTBP2Q14767 1821 aa15.76■□□□□ 0.11
PSEN1-219ENST00000556951 DDTLA6NHG4 134 aaPredicted RBP15.76■□□□□ 0.11
PSEN1-219ENST00000556951 RGS3P49796 1198 aa15.76■□□□□ 0.11
PSEN1-219ENST00000556951 SHHQ15465 462 aa15.76■□□□□ 0.11
PSEN1-219ENST00000556951 ALDH1L2Q3SY69 923 aa15.76■□□□□ 0.11
PSEN1-219ENST00000556951 ATG9AQ7Z3C6 839 aa15.76■□□□□ 0.11
PSEN1-219ENST00000556951 ANKRD13CQ8N6S4 541 aa15.76■□□□□ 0.11
PSEN1-219ENST00000556951 IL27Q8NEV9 243 aa15.76■□□□□ 0.11
PSEN1-219ENST00000556951 NECAB3Q96P71 396 aaPredicted RBP15.76■□□□□ 0.11
PSEN1-219ENST00000556951 OGDHLQ9ULD0 1010 aa15.76■□□□□ 0.11
PSEN1-219ENST00000556951 PHIPQ8WWQ0 1821 aa15.75■□□□□ 0.11
PSEN1-219ENST00000556951 PTPRFP10586 1907 aa15.75■□□□□ 0.11
PSEN1-219ENST00000556951 CTNND1O60716 968 aaKnown RBP15.75■□□□□ 0.11
PSEN1-219ENST00000556951 ENTPD3O75355 529 aa15.75■□□□□ 0.11
PSEN1-219ENST00000556951 GRIN2CQ14957 1233 aa15.75■□□□□ 0.11
PSEN1-219ENST00000556951 LRRC26Q2I0M4 334 aa15.75■□□□□ 0.11
PSEN1-219ENST00000556951 TREML2Q5T2D2 321 aa15.75■□□□□ 0.11
PSEN1-219ENST00000556951 LPIN2Q92539 896 aa15.75■□□□□ 0.11
PSEN1-219ENST00000556951 COA7Q96BR5 231 aa15.75■□□□□ 0.11
PSEN1-219ENST00000556951 USP44Q9H0E7 712 aa15.75■□□□□ 0.11
PSEN1-219ENST00000556951 DDX4Q9NQI0 724 aaKnown RBP15.75■□□□□ 0.11
PSEN1-219ENST00000556951 PICK1Q9NRD5 415 aa15.75■□□□□ 0.11
PSEN1-219ENST00000556951 RFX7Q2KHR2 1363 aa15.75■□□□□ 0.11
PSEN1-219ENST00000556951 EYA2O00167 538 aa15.74■□□□□ 0.11
PSEN1-219ENST00000556951 LDHBP07195 334 aaKnown RBP15.74■□□□□ 0.11
PSEN1-219ENST00000556951 COL6A1P12109 1028 aa15.74■□□□□ 0.11
PSEN1-219ENST00000556951 TAOK2Q9UL54 1235 aa15.74■□□□□ 0.11
PSEN1-219ENST00000556951 AGTPBP1Q9UPW5 1226 aa15.74■□□□□ 0.11
PSEN1-219ENST00000556951 SALL1Q9NSC2 1324 aa15.73■□□□□ 0.11
PSEN1-219ENST00000556951 MAST2Q6P0Q8 1798 aa15.73■□□□□ 0.11
PSEN1-219ENST00000556951 TRIM75PA6NK02 468 aa15.73■□□□□ 0.11
PSEN1-219ENST00000556951 SLC5A1P13866 664 aa15.73■□□□□ 0.11
PSEN1-219ENST00000556951 FAM110CQ1W6H9 321 aa15.73■□□□□ 0.11
PSEN1-219ENST00000556951 C9orf50Q5SZB4 431 aa15.73■□□□□ 0.11
PSEN1-219ENST00000556951 SMCR8Q8TEV9 937 aaPredicted RBP15.73■□□□□ 0.11
PSEN1-219ENST00000556951 SSH1Q8WYL5 1049 aa15.73■□□□□ 0.11
PSEN1-219ENST00000556951 SMC4Q9NTJ3 1288 aa15.73■□□□□ 0.11
PSEN1-219ENST00000556951 XIRP2A4UGR9 3374 aa15.73■□□□□ 0.11
PSEN1-219ENST00000556951 GAKO14976 1311 aa15.72■□□□□ 0.11
PSEN1-219ENST00000556951 GPR37L1O60883 481 aa15.72■□□□□ 0.11
PSEN1-219ENST00000556951 HMGCRP04035 888 aa15.72■□□□□ 0.11
PSEN1-219ENST00000556951 PDE3AQ14432 1141 aa15.72■□□□□ 0.11
PSEN1-219ENST00000556951 PPM1EQ8WY54 764 aa15.72■□□□□ 0.11
PSEN1-219ENST00000556951 HMX1Q9NP08 348 aaPredicted RBP15.72■□□□□ 0.11
PSEN1-219ENST00000556951 LRRFIP2Q9Y608 721 aaKnown RBP15.72■□□□□ 0.11
PSEN1-219ENST00000556951 ZBTB22O15209 634 aa15.71■□□□□ 0.11
PSEN1-219ENST00000556951 PHKA1P46020 1223 aa15.71■□□□□ 0.11
PSEN1-219ENST00000556951 RRP1BQ14684 758 aaKnown RBP15.71■□□□□ 0.11
PSEN1-219ENST00000556951 MAP3K21Q5TCX8 1036 aa15.71■□□□□ 0.11
PSEN1-219ENST00000556951 MRPL50Q8N5N7 158 aaKnown RBP15.71■□□□□ 0.11
PSEN1-219ENST00000556951 FAM163AQ96GL9 167 aaPredicted RBP15.71■□□□□ 0.11
PSEN1-219ENST00000556951 C11orf16Q9NQ32 467 aa15.71■□□□□ 0.11
PSEN1-219ENST00000556951 PPP4R2Q9NY27 417 aa15.71■□□□□ 0.11
PSEN1-219ENST00000556951 IPO8O15397 1037 aaKnown RBP15.7■□□□□ 0.1
PSEN1-219ENST00000556951 TBC1D12O60347 775 aa15.7■□□□□ 0.1
PSEN1-219ENST00000556951 MS4A1P11836 297 aa15.7■□□□□ 0.1
PSEN1-219ENST00000556951 POTEEQ6S8J3 1075 aa15.7■□□□□ 0.1
PSEN1-219ENST00000556951 PROCA1Q8NCQ7 364 aaPredicted RBP15.7■□□□□ 0.1
PSEN1-219ENST00000556951 TRIB2Q92519 343 aa15.7■□□□□ 0.1
PSEN1-219ENST00000556951 PLXNB2O15031 1838 aa15.7■□□□□ 0.1
PSEN1-219ENST00000556951 REV3LO60673 3130 aa15.69■□□□□ 0.1
PSEN1-219ENST00000556951 DOCK2Q92608 1830 aa15.69■□□□□ 0.1
PSEN1-219ENST00000556951 MYH13Q9UKX3 1938 aa15.69■□□□□ 0.1
PSEN1-219ENST00000556951 BMP1P13497 986 aa15.69■□□□□ 0.1
PSEN1-219ENST00000556951 GCLCP48506 637 aaPredicted RBP15.69■□□□□ 0.1
PSEN1-219ENST00000556951 FOXK2Q01167 660 aa15.69■□□□□ 0.1
PSEN1-219ENST00000556951 SPP2Q13103 211 aa15.69■□□□□ 0.1
PSEN1-219ENST00000556951 AKNAD1Q5T1N1 836 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms