RNA–Protein interactions for RNA: ENST00000556833.1

CHD8-211, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-211ENST00000556833 SH3RF3Q8TEJ3 882 aaPredicted RBP18.22■□□□□ 0.51
CHD8-211ENST00000556833 C1orf115Q9H7X2 142 aa18.22■□□□□ 0.51
CHD8-211ENST00000556833 LRP2BPQ9P2M1 347 aa18.22■□□□□ 0.51
CHD8-211ENST00000556833 AGTPBP1Q9UPW5 1226 aa18.22■□□□□ 0.51
CHD8-211ENST00000556833 FARP2O94887 1054 aaPredicted RBP18.21■□□□□ 0.51
CHD8-211ENST00000556833 GJB1P08034 283 aa18.21■□□□□ 0.51
CHD8-211ENST00000556833 HMGCS2P54868 508 aa18.21■□□□□ 0.51
CHD8-211ENST00000556833 GSTO1P78417 241 aa18.21■□□□□ 0.51
CHD8-211ENST00000556833 MAP3K10Q02779 954 aa18.21■□□□□ 0.51
CHD8-211ENST00000556833 MTX1Q13505 466 aa18.21■□□□□ 0.51
CHD8-211ENST00000556833 U2AF1L4Q8WU68 220 aaKnown RBP18.21■□□□□ 0.51
CHD8-211ENST00000556833 ARHGAP45Q92619 1136 aa18.21■□□□□ 0.51
CHD8-211ENST00000556833 OSBPL5Q9H0X9 879 aaPredicted RBP18.21■□□□□ 0.51
CHD8-211ENST00000556833 ARID4AP29374 1257 aaPredicted RBP18.2■□□□□ 0.5
CHD8-211ENST00000556833 OS9Q13438 667 aaPredicted RBP18.2■□□□□ 0.5
CHD8-211ENST00000556833 SHROOM1Q2M3G4 852 aaPredicted RBP18.2■□□□□ 0.5
CHD8-211ENST00000556833 ATF7IPQ6VMQ6 1270 aa18.2■□□□□ 0.5
CHD8-211ENST00000556833 NKX2-3Q8TAU0 364 aa18.2■□□□□ 0.5
CHD8-211ENST00000556833 AATFQ9NY61 560 aaKnown RBP eCLIP18.2■□□□□ 0.5
CHD8-211ENST00000556833 ALPK3Q96L96 1907 aa18.19■□□□□ 0.5
CHD8-211ENST00000556833 FOCADQ5VW36 1801 aa18.19■□□□□ 0.5
CHD8-211ENST00000556833 PEX10O60683 326 aa18.19■□□□□ 0.5
CHD8-211ENST00000556833 LDHCP07864 332 aa18.19■□□□□ 0.5
CHD8-211ENST00000556833 TTC39AQ5SRH9 613 aa18.19■□□□□ 0.5
CHD8-211ENST00000556833 MAPKAPK5Q8IW41 473 aa18.19■□□□□ 0.5
CHD8-211ENST00000556833 TMEM57Q8N5G2 664 aa18.19■□□□□ 0.5
CHD8-211ENST00000556833 DEFB118Q96PH6 123 aa18.19■□□□□ 0.5
CHD8-211ENST00000556833 DBNDD2Q9BQY9 259 aa18.19■□□□□ 0.5
CHD8-211ENST00000556833 RBM27Q9P2N5 1060 aaKnown RBP18.19■□□□□ 0.5
CHD8-211ENST00000556833 RANBP2P49792 3224 aaKnown RBP18.19■□□□□ 0.5
CHD8-211ENST00000556833 SZT2Q5T011 3432 aa18.19■□□□□ 0.5
CHD8-211ENST00000556833 IPO8O15397 1037 aaKnown RBP18.18■□□□□ 0.5
CHD8-211ENST00000556833 TFRCP02786 760 aaKnown RBP18.18■□□□□ 0.5
CHD8-211ENST00000556833 ZNF280CQ8ND82 737 aa18.18■□□□□ 0.5
CHD8-211ENST00000556833 NOL10Q9BSC4 688 aaKnown RBP18.18■□□□□ 0.5
CHD8-211ENST00000556833 SLC45A1Q9Y2W3 748 aa18.18■□□□□ 0.5
CHD8-211ENST00000556833 CAP2P40123 477 aa18.17■□□□□ 0.5
CHD8-211ENST00000556833 NAA16Q6N069 864 aaPredicted RBP18.17■□□□□ 0.5
CHD8-211ENST00000556833 UBE2Q1Q7Z7E8 422 aa18.17■□□□□ 0.5
CHD8-211ENST00000556833 ADGRA1Q86SQ6 560 aa18.17■□□□□ 0.5
CHD8-211ENST00000556833 TGFBRAP1Q8WUH2 860 aa18.17■□□□□ 0.5
CHD8-211ENST00000556833 COA7Q96BR5 231 aa18.17■□□□□ 0.5
CHD8-211ENST00000556833 SAP30BPQ9UHR5 308 aaKnown RBP18.17■□□□□ 0.5
CHD8-211ENST00000556833 PNMA3Q9UL41 463 aa18.17■□□□□ 0.5
CHD8-211ENST00000556833 PLXNB2O15031 1838 aa18.16■□□□□ 0.5
CHD8-211ENST00000556833 ZBTB22O15209 634 aa18.16■□□□□ 0.5
CHD8-211ENST00000556833 TBC1D12O60347 775 aa18.16■□□□□ 0.5
CHD8-211ENST00000556833 GDF11O95390 407 aa18.16■□□□□ 0.5
CHD8-211ENST00000556833 SGPL1O95470 568 aa18.16■□□□□ 0.5
CHD8-211ENST00000556833 UQCRFS1P1P0C7P4 283 aa18.16■□□□□ 0.5
CHD8-211ENST00000556833 JAG1P78504 1218 aa18.16■□□□□ 0.5
CHD8-211ENST00000556833 MTMR2Q13614 643 aa18.16■□□□□ 0.5
CHD8-211ENST00000556833 TNNI3KQ59H18 835 aa18.16■□□□□ 0.5
CHD8-211ENST00000556833 HTATIP2Q9BUP3 242 aa18.16■□□□□ 0.5
CHD8-211ENST00000556833 ASCC2Q9H1I8 757 aaPredicted RBP18.16■□□□□ 0.5
CHD8-211ENST00000556833 FPGT-TNNI3KV9GXZ4 949 aa18.16■□□□□ 0.5
CHD8-211ENST00000556833 MYH1P12882 1939 aa18.15■□□□□ 0.5
CHD8-211ENST00000556833 COL2A1P02458 1487 aaPredicted RBP18.15■□□□□ 0.5
CHD8-211ENST00000556833 USP17L5A8MUK1 530 aa18.15■□□□□ 0.5
CHD8-211ENST00000556833 CCER2I3L3R5 266 aa18.15■□□□□ 0.5
CHD8-211ENST00000556833 TRIM32Q13049 653 aa18.15■□□□□ 0.5
CHD8-211ENST00000556833 FAM110CQ1W6H9 321 aa18.15■□□□□ 0.5
CHD8-211ENST00000556833 PROCA1Q8NCQ7 364 aaPredicted RBP18.15■□□□□ 0.5
CHD8-211ENST00000556833 DIS3LQ8TF46 1054 aaKnown RBP18.15■□□□□ 0.5
CHD8-211ENST00000556833 TLR7Q9NYK1 1049 aaKnown RBP18.15■□□□□ 0.5
CHD8-211ENST00000556833 ZAP70P43403 619 aa18.14■□□□□ 0.49
CHD8-211ENST00000556833 DYNLL1P63167 89 aaKnown RBP18.14■□□□□ 0.49
CHD8-211ENST00000556833 CRACR2BQ8N4Y2 399 aaPredicted RBP18.14■□□□□ 0.49
CHD8-211ENST00000556833 TRIM34Q9BYJ4 488 aa18.14■□□□□ 0.49
CHD8-211ENST00000556833 DNAJC18Q9H819 358 aa18.14■□□□□ 0.49
CHD8-211ENST00000556833 PIH1D3Q9NQM4 214 aaKnown RBP18.14■□□□□ 0.49
CHD8-211ENST00000556833 PALD1Q9ULE6 856 aa18.14■□□□□ 0.49
CHD8-211ENST00000556833 NDUFB9Q9Y6M9 179 aa18.14■□□□□ 0.49
CHD8-211ENST00000556833 FLT1P17948 1338 aa18.14■□□□□ 0.49
CHD8-211ENST00000556833 NPM3O75607 178 aaKnown RBP18.13■□□□□ 0.49
CHD8-211ENST00000556833 SURF6O75683 361 aaKnown RBP18.13■□□□□ 0.49
CHD8-211ENST00000556833 CYP2E1P05181 493 aaPredicted RBP18.13■□□□□ 0.49
CHD8-211ENST00000556833 IRF5Q13568 498 aa18.13■□□□□ 0.49
CHD8-211ENST00000556833 CCDC158Q5M9N0 1113 aa18.13■□□□□ 0.49
CHD8-211ENST00000556833 ZKSCAN2Q63HK3 967 aa18.13■□□□□ 0.49
CHD8-211ENST00000556833 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.13■□□□□ 0.49
CHD8-211ENST00000556833 CCDC8Q9H0W5 538 aaPredicted RBP18.13■□□□□ 0.49
CHD8-211ENST00000556833 DDX60LQ5H9U9 1706 aaKnown RBP18.12■□□□□ 0.49
CHD8-211ENST00000556833 ZBTB7BO15156 539 aaPredicted RBP18.12■□□□□ 0.49
CHD8-211ENST00000556833 EVI5O60447 810 aa18.12■□□□□ 0.49
CHD8-211ENST00000556833 IRX3P78415 501 aaPredicted RBP18.12■□□□□ 0.49
CHD8-211ENST00000556833 POLA2Q14181 598 aa18.12■□□□□ 0.49
CHD8-211ENST00000556833 ITPRIPQ8IWB1 547 aa18.12■□□□□ 0.49
CHD8-211ENST00000556833 PXYLP1Q8TE99 480 aa18.12■□□□□ 0.49
CHD8-211ENST00000556833 PAWRQ96IZ0 340 aaKnown RBP18.12■□□□□ 0.49
CHD8-211ENST00000556833 BCL11AQ9H165 835 aa18.12■□□□□ 0.49
CHD8-211ENST00000556833 AS3MTQ9HBK9 375 aa18.12■□□□□ 0.49
CHD8-211ENST00000556833 PI4KBQ9UBF8 816 aa18.12■□□□□ 0.49
CHD8-211ENST00000556833 HERC5Q9UII4 1024 aaKnown RBP18.12■□□□□ 0.49
CHD8-211ENST00000556833 BAG3O95817 575 aa18.11■□□□□ 0.49
CHD8-211ENST00000556833 CYP2B6P20813 491 aa18.11■□□□□ 0.49
CHD8-211ENST00000556833 PABPC4Q13310 644 aaKnown RBP eCLIP18.11■□□□□ 0.49
CHD8-211ENST00000556833 ZYXQ15942 572 aaKnown RBP18.11■□□□□ 0.49
CHD8-211ENST00000556833 FTSJ3Q8IY81 847 aaKnown RBP18.11■□□□□ 0.49
CHD8-211ENST00000556833 MIGA1Q8NAN2 632 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms