RNA–Protein interactions for RNA: ENST00000556742.1

IFT43-212, Transcript of intraflagellar transport 43, humanhuman

TSL 2 BASIC

Gene IFT43, Length 848 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-212ENST00000556742 UBE3CQ15386 1083 aa12.99□□□□□ -0.33
IFT43-212ENST00000556742 MAPKAPK5Q8IW41 473 aa12.99□□□□□ -0.33
IFT43-212ENST00000556742 SMC5Q8IY18 1101 aa12.99□□□□□ -0.33
IFT43-212ENST00000556742 SCYL3Q8IZE3 742 aa12.99□□□□□ -0.33
IFT43-212ENST00000556742 CNKSR2Q8WXI2 1034 aa12.99□□□□□ -0.33
IFT43-212ENST00000556742 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.99□□□□□ -0.33
IFT43-212ENST00000556742 IGF2BP3O00425 579 aaKnown RBP eCLIP12.98□□□□□ -0.33
IFT43-212ENST00000556742 IRF6O14896 467 aa12.98□□□□□ -0.33
IFT43-212ENST00000556742 GLRX3O76003 335 aaKnown RBP12.98□□□□□ -0.33
IFT43-212ENST00000556742 CETPP11597 493 aa12.98□□□□□ -0.33
IFT43-212ENST00000556742 USP5P45974 858 aa12.98□□□□□ -0.33
IFT43-212ENST00000556742 SNAPC2Q13487 334 aa12.98□□□□□ -0.33
IFT43-212ENST00000556742 ANKRD45Q5TZF3 282 aa12.98□□□□□ -0.33
IFT43-212ENST00000556742 FOXP4Q8IVH2 680 aaPredicted RBP12.98□□□□□ -0.33
IFT43-212ENST00000556742 KBTBD3Q8NAB2 608 aa12.98□□□□□ -0.33
IFT43-212ENST00000556742 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.98□□□□□ -0.33
IFT43-212ENST00000556742 ZCCHC17Q9NP64 241 aaKnown RBP12.98□□□□□ -0.33
IFT43-212ENST00000556742 KCNH4Q9UQ05 1017 aa12.98□□□□□ -0.33
IFT43-212ENST00000556742 CCL15-CCL14A0A0B4J2E2 113 aa12.97□□□□□ -0.33
IFT43-212ENST00000556742 HLA-DOAP06340 250 aa12.97□□□□□ -0.33
IFT43-212ENST00000556742 MX1P20591 662 aa12.97□□□□□ -0.33
IFT43-212ENST00000556742 CCL15Q16663 113 aa12.97□□□□□ -0.33
IFT43-212ENST00000556742 TNS4Q8IZW8 715 aa12.97□□□□□ -0.33
IFT43-212ENST00000556742 PI4K2BQ8TCG2 481 aa12.97□□□□□ -0.33
IFT43-212ENST00000556742 BRI3BPQ8WY22 251 aa12.97□□□□□ -0.33
IFT43-212ENST00000556742 PTPN18Q99952 460 aa12.97□□□□□ -0.33
IFT43-212ENST00000556742 TBC1D2Q9BYX2 928 aa12.97□□□□□ -0.33
IFT43-212ENST00000556742 CRNKL1Q9BZJ0 848 aaKnown RBP12.97□□□□□ -0.33
IFT43-212ENST00000556742 EHD4Q9H223 541 aa12.97□□□□□ -0.33
IFT43-212ENST00000556742 PICK1Q9NRD5 415 aa12.97□□□□□ -0.33
IFT43-212ENST00000556742 HTTP42858 3142 aa12.97□□□□□ -0.33
IFT43-212ENST00000556742 MGAMO43451 1857 aa12.96□□□□□ -0.33
IFT43-212ENST00000556742 CXCL11O14625 94 aa12.96□□□□□ -0.33
IFT43-212ENST00000556742 TBC1D8O95759 1140 aa12.96□□□□□ -0.33
IFT43-212ENST00000556742 ZFYP08048 801 aaPredicted RBP12.96□□□□□ -0.33
IFT43-212ENST00000556742 PTPRAP18433 802 aa12.96□□□□□ -0.33
IFT43-212ENST00000556742 LRRFIP1Q32MZ4 808 aaKnown RBP12.96□□□□□ -0.33
IFT43-212ENST00000556742 TTC6Q86TZ1 520 aa12.96□□□□□ -0.33
IFT43-212ENST00000556742 GINM1Q9NU53 330 aa12.96□□□□□ -0.33
IFT43-212ENST00000556742 STAP2Q9UGK3 403 aa12.96□□□□□ -0.33
IFT43-212ENST00000556742 TAOK2Q9UL54 1235 aa12.96□□□□□ -0.33
IFT43-212ENST00000556742 PALD1Q9ULE6 856 aa12.96□□□□□ -0.33
IFT43-212ENST00000556742 FAM196BA6NMK8 535 aa12.95□□□□□ -0.34
IFT43-212ENST00000556742 GPR25O00155 361 aa12.95□□□□□ -0.34
IFT43-212ENST00000556742 SLURP2P0DP57 97 aa12.95□□□□□ -0.34
IFT43-212ENST00000556742 CAP2P40123 477 aa12.95□□□□□ -0.34
IFT43-212ENST00000556742 TSHZ3Q63HK5 1081 aa12.95□□□□□ -0.34
IFT43-212ENST00000556742 LCORLQ8N3X6 602 aa12.95□□□□□ -0.34
IFT43-212ENST00000556742 CRACR2BQ8N4Y2 399 aaPredicted RBP12.95□□□□□ -0.34
IFT43-212ENST00000556742 OTUD7AQ8TE49 926 aaPredicted RBP12.95□□□□□ -0.34
IFT43-212ENST00000556742 ATP8A2Q9NTI2 1148 aa12.95□□□□□ -0.34
IFT43-212ENST00000556742 SERPINB13Q9UIV8 391 aa12.95□□□□□ -0.34
IFT43-212ENST00000556742 AFG3L2Q9Y4W6 797 aa12.95□□□□□ -0.34
IFT43-212ENST00000556742 CENPFP49454 3210 aa12.94□□□□□ -0.34
IFT43-212ENST00000556742 MBD4O95243 580 aa12.94□□□□□ -0.34
IFT43-212ENST00000556742 IGHDP01880 384 aa12.94□□□□□ -0.34
IFT43-212ENST00000556742 ASNSP08243 561 aa12.94□□□□□ -0.34
IFT43-212ENST00000556742 MAPK8IP2Q13387 824 aaPredicted RBP12.94□□□□□ -0.34
IFT43-212ENST00000556742 TATDN1Q6P1N9 297 aa12.94□□□□□ -0.34
IFT43-212ENST00000556742 TICAM2Q86XR7 235 aa12.94□□□□□ -0.34
IFT43-212ENST00000556742 TRIM34Q9BYJ4 488 aa12.94□□□□□ -0.34
IFT43-212ENST00000556742 DNAJC18Q9H819 358 aa12.94□□□□□ -0.34
IFT43-212ENST00000556742 DCP1AQ9NPI6 582 aaPredicted RBP12.94□□□□□ -0.34
IFT43-212ENST00000556742 SAP30BPQ9UHR5 308 aaKnown RBP12.94□□□□□ -0.34
IFT43-212ENST00000556742 ZHX2Q9Y6X8 837 aa12.94□□□□□ -0.34
IFT43-212ENST00000556742 A0A0G2JLL6 359 aaPredicted RBP12.93□□□□□ -0.34
IFT43-212ENST00000556742 PDE1AP54750 535 aa12.93□□□□□ -0.34
IFT43-212ENST00000556742 NUCB1Q02818 461 aa12.93□□□□□ -0.34
IFT43-212ENST00000556742 CRHR2Q13324 411 aa12.93□□□□□ -0.34
IFT43-212ENST00000556742 MOGSQ13724 837 aa12.93□□□□□ -0.34
IFT43-212ENST00000556742 IFFO2Q5TF58 517 aa12.93□□□□□ -0.34
IFT43-212ENST00000556742 FASTKD5Q7L8L6 764 aaKnown RBP12.93□□□□□ -0.34
IFT43-212ENST00000556742 PRRT2Q7Z6L0 340 aaPredicted RBP12.93□□□□□ -0.34
IFT43-212ENST00000556742 ANKRD23Q86SG2 305 aa12.93□□□□□ -0.34
IFT43-212ENST00000556742 FAM43AQ8N2R8 423 aa12.93□□□□□ -0.34
IFT43-212ENST00000556742 SDR42E1Q8WUS8 393 aa12.93□□□□□ -0.34
IFT43-212ENST00000556742 ZNF296Q8WUU4 475 aaPredicted RBP12.93□□□□□ -0.34
IFT43-212ENST00000556742 APPBP2Q92624 585 aa12.93□□□□□ -0.34
IFT43-212ENST00000556742 PUS7LQ9H0K6 701 aaKnown RBP12.93□□□□□ -0.34
IFT43-212ENST00000556742 ARMT1Q9H993 441 aa12.93□□□□□ -0.34
IFT43-212ENST00000556742 USP17L5A8MUK1 530 aa12.92□□□□□ -0.34
IFT43-212ENST00000556742 BTBD19C9JJ37 291 aa12.92□□□□□ -0.34
IFT43-212ENST00000556742 RNF113AO15541 343 aaKnown RBP12.92□□□□□ -0.34
IFT43-212ENST00000556742 FKTNO75072 461 aa12.92□□□□□ -0.34
IFT43-212ENST00000556742 RRP1BQ14684 758 aaKnown RBP12.92□□□□□ -0.34
IFT43-212ENST00000556742 TAF1CQ15572 869 aaPredicted RBP12.92□□□□□ -0.34
IFT43-212ENST00000556742 SLFNL1Q499Z3 407 aa12.92□□□□□ -0.34
IFT43-212ENST00000556742 CHD1LQ86WJ1 897 aa12.92□□□□□ -0.34
IFT43-212ENST00000556742 DDRGK1Q96HY6 314 aa12.92□□□□□ -0.34
IFT43-212ENST00000556742 LNPKQ9C0E8 428 aa12.92□□□□□ -0.34
IFT43-212ENST00000556742 R3HDMLQ9H3Y0 253 aa12.92□□□□□ -0.34
IFT43-212ENST00000556742 AS3MTQ9HBK9 375 aa12.92□□□□□ -0.34
IFT43-212ENST00000556742 ZFYVE28Q9HCC9 887 aa12.92□□□□□ -0.34
IFT43-212ENST00000556742 MCM9Q9NXL9 1143 aa12.92□□□□□ -0.34
IFT43-212ENST00000556742 GREB1LQ9C091 1923 aaPredicted RBP12.92□□□□□ -0.34
IFT43-212ENST00000556742 CHGBP05060 677 aa12.91□□□□□ -0.34
IFT43-212ENST00000556742 POLR3DP05423 398 aaPredicted RBP12.91□□□□□ -0.34
IFT43-212ENST00000556742 PLCD1P51178 756 aa12.91□□□□□ -0.34
IFT43-212ENST00000556742 GABPAQ06546 454 aa12.91□□□□□ -0.34
IFT43-212ENST00000556742 GIMAP6Q6P9H5 292 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms