RNA–Protein interactions for RNA: ENST00000556622.1

CPSF2-205, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 5

Gene CPSF2, Length 469 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-205ENST00000556622 BRD2P25440 801 aaKnown RBP7.63□□□□□ -1.19
CPSF2-205ENST00000556622 MTHFSP49914 203 aa7.63□□□□□ -1.19
CPSF2-205ENST00000556622 IDH3AP50213 366 aa7.63□□□□□ -1.19
CPSF2-205ENST00000556622 RARSP54136 660 aaKnown RBP7.63□□□□□ -1.19
CPSF2-205ENST00000556622 U2AF1Q01081 240 aaKnown RBP eCLIP7.63□□□□□ -1.19
CPSF2-205ENST00000556622 PDE4CQ08493 712 aa7.63□□□□□ -1.19
CPSF2-205ENST00000556622 SPEM2Q0P670 501 aa7.63□□□□□ -1.19
CPSF2-205ENST00000556622 ALDH1L2Q3SY69 923 aa7.63□□□□□ -1.19
CPSF2-205ENST00000556622 TRAPPC3LQ5T215 181 aa7.63□□□□□ -1.19
CPSF2-205ENST00000556622 C20orf204Q6ZNR8 217 aa7.63□□□□□ -1.19
CPSF2-205ENST00000556622 ARHGEF25Q86VW2 580 aa7.63□□□□□ -1.19
CPSF2-205ENST00000556622 CCDC146Q8IYE0 955 aa7.63□□□□□ -1.19
CPSF2-205ENST00000556622 COG3Q96JB2 828 aa7.63□□□□□ -1.19
CPSF2-205ENST00000556622 SSBP4Q9BWG4 385 aaPredicted RBP7.63□□□□□ -1.19
CPSF2-205ENST00000556622 CDK12Q9NYV4 1490 aaPredicted RBP7.62□□□□□ -1.19
CPSF2-205ENST00000556622 A0A1W2PP64 1363 aa7.62□□□□□ -1.19
CPSF2-205ENST00000556622 A0A0A0MRY4 1105 aa7.62□□□□□ -1.19
CPSF2-205ENST00000556622 ADH7P40394 386 aa7.62□□□□□ -1.19
CPSF2-205ENST00000556622 ARSDP51689 593 aa7.62□□□□□ -1.19
CPSF2-205ENST00000556622 TOM1L2Q6ZVM7 507 aa7.62□□□□□ -1.19
CPSF2-205ENST00000556622 KRT27Q7Z3Y8 459 aa7.62□□□□□ -1.19
CPSF2-205ENST00000556622 RAB44Q7Z6P3 723 aaPredicted RBP7.62□□□□□ -1.19
CPSF2-205ENST00000556622 ETFBKMTQ8IXQ9 262 aa7.62□□□□□ -1.19
CPSF2-205ENST00000556622 DZIP1LQ8IYY4 767 aaKnown RBP7.62□□□□□ -1.19
CPSF2-205ENST00000556622 CPDO75976 1380 aa7.61□□□□□ -1.19
CPSF2-205ENST00000556622 SPATA31A1Q5TZJ5 1347 aa7.61□□□□□ -1.19
CPSF2-205ENST00000556622 FYB1O15117 783 aa7.61□□□□□ -1.19
CPSF2-205ENST00000556622 DIAPH1O60610 1272 aaKnown RBP7.61□□□□□ -1.19
CPSF2-205ENST00000556622 EPB42P16452 691 aa7.61□□□□□ -1.19
CPSF2-205ENST00000556622 NPR3P17342 541 aa7.61□□□□□ -1.19
CPSF2-205ENST00000556622 FBLN1P23142 703 aa7.61□□□□□ -1.19
CPSF2-205ENST00000556622 AMPHP49418 695 aa7.61□□□□□ -1.19
CPSF2-205ENST00000556622 MVPQ14764 893 aaKnown RBP7.61□□□□□ -1.19
CPSF2-205ENST00000556622 FAM26DQ5JW98 314 aa7.61□□□□□ -1.19
CPSF2-205ENST00000556622 L1TD1Q5T7N2 865 aaKnown RBP7.61□□□□□ -1.19
CPSF2-205ENST00000556622 ARHGAP45Q92619 1136 aa7.61□□□□□ -1.19
CPSF2-205ENST00000556622 FRAT1Q92837 279 aaPredicted RBP7.61□□□□□ -1.19
CPSF2-205ENST00000556622 ARID3AQ99856 593 aa7.61□□□□□ -1.19
CPSF2-205ENST00000556622 GGNBP2Q9H3C7 697 aa7.61□□□□□ -1.19
CPSF2-205ENST00000556622 STIM2Q9P246 746 aa7.61□□□□□ -1.19
CPSF2-205ENST00000556622 RNF112Q9ULX5 631 aa7.61□□□□□ -1.19
CPSF2-205ENST00000556622 AKAP12Q02952 1782 aa7.61□□□□□ -1.19
CPSF2-205ENST00000556622 COL14A1Q05707 1796 aaKnown RBP7.61□□□□□ -1.19
CPSF2-205ENST00000556622 EDC4Q6P2E9 1401 aaKnown RBP7.61□□□□□ -1.19
CPSF2-205ENST00000556622 AATKQ6ZMQ8 1374 aa7.6□□□□□ -1.19
CPSF2-205ENST00000556622 PAX4O43316 350 aa7.6□□□□□ -1.19
CPSF2-205ENST00000556622 SF3B2Q13435 895 aaKnown RBP7.6□□□□□ -1.19
CPSF2-205ENST00000556622 HDAC1Q13547 482 aaPredicted RBP7.6□□□□□ -1.19
CPSF2-205ENST00000556622 CCINQ13939 588 aa7.6□□□□□ -1.19
CPSF2-205ENST00000556622 NAA30Q147X3 362 aaPredicted RBP7.6□□□□□ -1.19
CPSF2-205ENST00000556622 C8orf34Q49A92 452 aa7.6□□□□□ -1.19
CPSF2-205ENST00000556622 TREML1Q86YW5 311 aa7.6□□□□□ -1.19
CPSF2-205ENST00000556622 LENG1Q96BZ8 264 aaPredicted RBP7.6□□□□□ -1.19
CPSF2-205ENST00000556622 LTV1Q96GA3 475 aaPredicted RBP7.6□□□□□ -1.19
CPSF2-205ENST00000556622 FMNL2Q96PY5 1086 aa7.6□□□□□ -1.19
CPSF2-205ENST00000556622 MKNK1Q9BUB5 465 aa7.6□□□□□ -1.19
CPSF2-205ENST00000556622 CHMP4AQ9BY43 222 aa7.6□□□□□ -1.19
CPSF2-205ENST00000556622 SEPT3Q9UH03 358 aa7.6□□□□□ -1.19
CPSF2-205ENST00000556622 ISY1Q9ULR0 285 aaKnown RBP7.6□□□□□ -1.19
CPSF2-205ENST00000556622 THRAP3Q9Y2W1 955 aaKnown RBP7.6□□□□□ -1.19
CPSF2-205ENST00000556622 NWD2Q9ULI1 1742 aa7.6□□□□□ -1.19
CPSF2-205ENST00000556622 CD163L1Q9NR16 1453 aa7.6□□□□□ -1.19
CPSF2-205ENST00000556622 RGS12O14924 1447 aa7.6□□□□□ -1.19
CPSF2-205ENST00000556622 USP31Q70CQ4 1352 aa7.59□□□□□ -1.19
CPSF2-205ENST00000556622 ABCA3Q99758 1704 aa7.59□□□□□ -1.19
CPSF2-205ENST00000556622 BCAR3O75815 825 aa7.59□□□□□ -1.19
CPSF2-205ENST00000556622 MAP3K6O95382 1288 aa7.59□□□□□ -1.19
CPSF2-205ENST00000556622 YBX3P16989 372 aaKnown RBP eCLIP7.59□□□□□ -1.19
CPSF2-205ENST00000556622 RGS3P49796 1198 aa7.59□□□□□ -1.19
CPSF2-205ENST00000556622 C20orf194Q5TEA3 1177 aa7.59□□□□□ -1.19
CPSF2-205ENST00000556622 HELQQ8TDG4 1101 aa7.59□□□□□ -1.19
CPSF2-205ENST00000556622 NLRP2Q9NX02 1062 aa7.59□□□□□ -1.19
CPSF2-205ENST00000556622 CAMTA1Q9Y6Y1 1673 aa7.59□□□□□ -1.19
CPSF2-205ENST00000556622 PLCH1Q4KWH8 1693 aa7.58□□□□□ -1.2
CPSF2-205ENST00000556622 CARNS1A5YM72 827 aa7.58□□□□□ -1.2
CPSF2-205ENST00000556622 TXKP42681 527 aa7.58□□□□□ -1.2
CPSF2-205ENST00000556622 GNAI1P63096 354 aa7.58□□□□□ -1.2
CPSF2-205ENST00000556622 ATF7IPQ6VMQ6 1270 aa7.58□□□□□ -1.2
CPSF2-205ENST00000556622 RETREG2Q8NC44 543 aa7.58□□□□□ -1.2
CPSF2-205ENST00000556622 IP6K1Q92551 441 aa7.58□□□□□ -1.2
CPSF2-205ENST00000556622 GCC1Q96CN9 775 aa7.58□□□□□ -1.2
CPSF2-205ENST00000556622 CARD10Q9BWT7 1032 aa7.58□□□□□ -1.2
CPSF2-205ENST00000556622 SMC4Q9NTJ3 1288 aa7.58□□□□□ -1.2
CPSF2-205ENST00000556622 RTCBQ9Y3I0 505 aaKnown RBP7.58□□□□□ -1.2
CPSF2-205ENST00000556622 KCNMB2Q9Y691 235 aa7.58□□□□□ -1.2
CPSF2-205ENST00000556622 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.58□□□□□ -1.2
CPSF2-205ENST00000556622 PIK3C2AO00443 1686 aa7.57□□□□□ -1.2
CPSF2-205ENST00000556622 WDR17Q8IZU2 1322 aa7.57□□□□□ -1.2
CPSF2-205ENST00000556622 PHRF1Q9P1Y6 1649 aaKnown RBP7.57□□□□□ -1.2
CPSF2-205ENST00000556622 EXOC5O00471 708 aa7.57□□□□□ -1.2
CPSF2-205ENST00000556622 U2SURPO15042 1029 aaKnown RBP7.57□□□□□ -1.2
CPSF2-205ENST00000556622 TMPOP42166 694 aaKnown RBP7.57□□□□□ -1.2
CPSF2-205ENST00000556622 TNNT2P45379 298 aaPredicted RBP7.57□□□□□ -1.2
CPSF2-205ENST00000556622 RRS1Q15050 365 aaKnown RBP7.57□□□□□ -1.2
CPSF2-205ENST00000556622 NFKBIBQ15653 356 aa7.57□□□□□ -1.2
CPSF2-205ENST00000556622 FAM196AQ6ZSG2 479 aa7.57□□□□□ -1.2
CPSF2-205ENST00000556622 ANKRD24Q8TF21 1146 aa7.57□□□□□ -1.2
CPSF2-205ENST00000556622 FAM13BQ9NYF5 915 aa7.57□□□□□ -1.2
CPSF2-205ENST00000556622 GLI3P10071 1580 aa7.57□□□□□ -1.2
CPSF2-205ENST00000556622 CRYBG1Q9Y4K1 1723 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms