RNA–Protein interactions for RNA: ENST00000556516.1

PCNX1-212, Transcript of pecanex 1, humanhuman

TSL 3

Gene PCNX1, Length 583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-212ENST00000556516 ERVK-24P63145 666 aa7.34□□□□□ -1.23
PCNX1-212ENST00000556516 ZBTB37Q5TC79 503 aa7.34□□□□□ -1.23
PCNX1-212ENST00000556516 ISL2Q96A47 359 aa7.34□□□□□ -1.23
PCNX1-212ENST00000556516 DPH2Q9BQC3 489 aaPredicted RBP7.34□□□□□ -1.23
PCNX1-212ENST00000556516 ANTXR1Q9H6X2 564 aa7.34□□□□□ -1.23
PCNX1-212ENST00000556516 DAGLAQ9Y4D2 1042 aa7.34□□□□□ -1.23
PCNX1-212ENST00000556516 SNCAIPQ9Y6H5 919 aa7.34□□□□□ -1.23
PCNX1-212ENST00000556516 DNAJA2O60884 412 aa7.33□□□□□ -1.24
PCNX1-212ENST00000556516 PGRP06401 933 aa7.33□□□□□ -1.24
PCNX1-212ENST00000556516 NFICP08651 508 aa7.33□□□□□ -1.24
PCNX1-212ENST00000556516 HNRNPUQ00839 825 aaKnown RBP eCLIP7.33□□□□□ -1.24
PCNX1-212ENST00000556516 RING1Q06587 406 aa7.33□□□□□ -1.24
PCNX1-212ENST00000556516 NKG7Q16617 165 aa7.33□□□□□ -1.24
PCNX1-212ENST00000556516 FBXW10Q5XX13 1052 aa7.33□□□□□ -1.24
PCNX1-212ENST00000556516 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.33□□□□□ -1.24
PCNX1-212ENST00000556516 SLITRK4Q8IW52 837 aa7.33□□□□□ -1.24
PCNX1-212ENST00000556516 RASGRP4Q8TDF6 673 aa7.33□□□□□ -1.24
PCNX1-212ENST00000556516 TP53INP1Q96A56 240 aa7.33□□□□□ -1.24
PCNX1-212ENST00000556516 C8orf37Q96NL8 207 aa7.33□□□□□ -1.24
PCNX1-212ENST00000556516 SSBP4Q9BWG4 385 aaPredicted RBP7.33□□□□□ -1.24
PCNX1-212ENST00000556516 KCNF1Q9H3M0 494 aa7.33□□□□□ -1.24
PCNX1-212ENST00000556516 ATXN3LQ9H3M9 355 aa7.33□□□□□ -1.24
PCNX1-212ENST00000556516 HTR3BO95264 441 aa7.32□□□□□ -1.24
PCNX1-212ENST00000556516 ATF4P18848 351 aaPredicted RBP7.32□□□□□ -1.24
PCNX1-212ENST00000556516 PLCG1P19174 1290 aa7.32□□□□□ -1.24
PCNX1-212ENST00000556516 RNF214Q8ND24 703 aa7.32□□□□□ -1.24
PCNX1-212ENST00000556516 MYRFLQ96LU7 910 aa7.32□□□□□ -1.24
PCNX1-212ENST00000556516 SEMA6CQ9H3T2 930 aa7.32□□□□□ -1.24
PCNX1-212ENST00000556516 GSX1Q9H4S2 264 aaPredicted RBP7.32□□□□□ -1.24
PCNX1-212ENST00000556516 SSU72Q9NP77 194 aaKnown RBP7.32□□□□□ -1.24
PCNX1-212ENST00000556516 TPSG1Q9NRR2 321 aa7.32□□□□□ -1.24
PCNX1-212ENST00000556516 REV1Q9UBZ9 1251 aa7.32□□□□□ -1.24
PCNX1-212ENST00000556516 KLHL3Q9UH77 587 aa7.32□□□□□ -1.24
PCNX1-212ENST00000556516 MRVI1Q9Y6F6 885 aa7.32□□□□□ -1.24
PCNX1-212ENST00000556516 SYNGAP1Q96PV0 1343 aa7.31□□□□□ -1.24
PCNX1-212ENST00000556516 UPK3BL1B0FP48 263 aa7.31□□□□□ -1.24
PCNX1-212ENST00000556516 UPK3BL2E5RIL1 263 aa7.31□□□□□ -1.24
PCNX1-212ENST00000556516 MAP4P27816 1152 aaKnown RBP7.31□□□□□ -1.24
PCNX1-212ENST00000556516 GNL2Q13823 731 aaKnown RBP7.31□□□□□ -1.24
PCNX1-212ENST00000556516 DOC2BQ14184 412 aa7.31□□□□□ -1.24
PCNX1-212ENST00000556516 MCF2L2Q86YR7 1114 aa7.31□□□□□ -1.24
PCNX1-212ENST00000556516 SMYD4Q8IYR2 804 aaPredicted RBP7.31□□□□□ -1.24
PCNX1-212ENST00000556516 XAGE3Q8WTP9 111 aa7.31□□□□□ -1.24
PCNX1-212ENST00000556516 FERD3LQ96RJ6 166 aa7.31□□□□□ -1.24
PCNX1-212ENST00000556516 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.31□□□□□ -1.24
PCNX1-212ENST00000556516 WNT10AQ9GZT5 417 aa7.31□□□□□ -1.24
PCNX1-212ENST00000556516 ACSS3Q9H6R3 686 aa7.31□□□□□ -1.24
PCNX1-212ENST00000556516 PPP1R1BQ9UD71 204 aaPredicted RBP7.31□□□□□ -1.24
PCNX1-212ENST00000556516 TJP2Q9UDY2 1190 aa7.31□□□□□ -1.24
PCNX1-212ENST00000556516 ROBO2Q9HCK4 1378 aa7.31□□□□□ -1.24
PCNX1-212ENST00000556516 ARID5AQ03989 594 aa7.3□□□□□ -1.24
PCNX1-212ENST00000556516 DIEXFQ68CQ4 756 aaKnown RBP7.3□□□□□ -1.24
PCNX1-212ENST00000556516 FAM20CQ8IXL6 584 aa7.3□□□□□ -1.24
PCNX1-212ENST00000556516 ACSF2Q96CM8 615 aaPredicted RBP7.3□□□□□ -1.24
PCNX1-212ENST00000556516 TANGO6Q9C0B7 1094 aa7.3□□□□□ -1.24
PCNX1-212ENST00000556516 PRKAG2Q9UGJ0 569 aa7.3□□□□□ -1.24
PCNX1-212ENST00000556516 DCAF1Q9Y4B6 1507 aa7.3□□□□□ -1.24
PCNX1-212ENST00000556516 HMX2A2RU54 273 aa7.29□□□□□ -1.24
PCNX1-212ENST00000556516 FAM86C2PA6NEL3 165 aa7.29□□□□□ -1.24
PCNX1-212ENST00000556516 FANCGO15287 622 aa7.29□□□□□ -1.24
PCNX1-212ENST00000556516 FGRP09769 529 aa7.29□□□□□ -1.24
PCNX1-212ENST00000556516 SOX9P48436 509 aa7.29□□□□□ -1.24
PCNX1-212ENST00000556516 ZNF165P49910 485 aa7.29□□□□□ -1.24
PCNX1-212ENST00000556516 CDK5R2Q13319 367 aa7.29□□□□□ -1.24
PCNX1-212ENST00000556516 NFKBIBQ15653 356 aa7.29□□□□□ -1.24
PCNX1-212ENST00000556516 GPAT2Q6NUI2 795 aa7.29□□□□□ -1.24
PCNX1-212ENST00000556516 RUFY4Q6ZNE9 571 aa7.29□□□□□ -1.24
PCNX1-212ENST00000556516 BEND4Q6ZU67 534 aa7.29□□□□□ -1.24
PCNX1-212ENST00000556516 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.29□□□□□ -1.24
PCNX1-212ENST00000556516 SHISA5Q8N114 240 aa7.29□□□□□ -1.24
PCNX1-212ENST00000556516 ANAPC16Q96DE5 110 aa7.29□□□□□ -1.24
PCNX1-212ENST00000556516 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.28□□□□□ -1.24
PCNX1-212ENST00000556516 CHURC1-FNTBB4DL54 471 aa7.28□□□□□ -1.24
PCNX1-212ENST00000556516 PROCP04070 461 aa7.28□□□□□ -1.24
PCNX1-212ENST00000556516 PDE4BQ07343 736 aa7.28□□□□□ -1.24
PCNX1-212ENST00000556516 SLBPQ14493 270 aaKnown RBP eCLIP7.28□□□□□ -1.24
PCNX1-212ENST00000556516 UVSSAQ2YD98 709 aa7.28□□□□□ -1.24
PCNX1-212ENST00000556516 OVOS1Q6IE37 1185 aa7.28□□□□□ -1.24
PCNX1-212ENST00000556516 CDC37L1Q7L3B6 337 aa7.28□□□□□ -1.24
PCNX1-212ENST00000556516 SLC43A3Q8NBI5 491 aa7.28□□□□□ -1.24
PCNX1-212ENST00000556516 DHX38Q92620 1227 aaKnown RBP7.28□□□□□ -1.24
PCNX1-212ENST00000556516 ABCC9O60706 1549 aa7.27□□□□□ -1.25
PCNX1-212ENST00000556516 FAM95CA0A1B0GW59 222 aa7.27□□□□□ -1.25
PCNX1-212ENST00000556516 DHX15O43143 795 aaKnown RBP7.27□□□□□ -1.25
PCNX1-212ENST00000556516 PRAMEF13Q5VWM6 474 aa7.27□□□□□ -1.25
PCNX1-212ENST00000556516 VPS37DQ86XT2 251 aa7.27□□□□□ -1.25
PCNX1-212ENST00000556516 REXO1Q8N1G1 1221 aaKnown RBP7.27□□□□□ -1.25
PCNX1-212ENST00000556516 FAM169BQ8N8A8 192 aa7.27□□□□□ -1.25
PCNX1-212ENST00000556516 FAM13CQ8NE31 585 aa7.27□□□□□ -1.25
PCNX1-212ENST00000556516 ZNF507Q8TCN5 953 aa7.27□□□□□ -1.25
PCNX1-212ENST00000556516 CPLX3Q8WVH0 158 aa7.27□□□□□ -1.25
PCNX1-212ENST00000556516 TMEM87BQ96K49 555 aa7.27□□□□□ -1.25
PCNX1-212ENST00000556516 SPOCK3Q9BQ16 436 aa7.27□□□□□ -1.25
PCNX1-212ENST00000556516 SRRTQ9BXP5 876 aaKnown RBP7.27□□□□□ -1.25
PCNX1-212ENST00000556516 C7orf69Q9H7B7 122 aa7.27□□□□□ -1.25
PCNX1-212ENST00000556516 EHMT1Q9H9B1 1298 aa7.27□□□□□ -1.25
PCNX1-212ENST00000556516 ZNRF3Q9ULT6 936 aa7.27□□□□□ -1.25
PCNX1-212ENST00000556516 PRR36Q9H6K5 1346 aa7.27□□□□□ -1.25
PCNX1-212ENST00000556516 SSBP05455 408 aaKnown RBP eCLIP7.26□□□□□ -1.25
PCNX1-212ENST00000556516 POLR2BP30876 1174 aaKnown RBP7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms